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CaUC01G002060 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G002060
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationCiama_Chr01:2041348..2042413
RNA-Seq ExpressionCaUC01G002060
SyntenyCaUC01G002060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042689.1 uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa]2.3e-2660Show/hide
Query:  MASLQCNKPADHEYSQHQQKHDQQH-HHCFGGHVSDKIKGVF-KGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD
        MA  QC KPADH + QHQQKHDQQH HHCFGGHVSDKIKGVF KGHHH QA PA   VHHSAN SHCK +GSKKKKEH   KEG                
Subjt:  MASLQCNKPADHEYSQHQQKHDQQH-HHCFGGHVSDKIKGVF-KGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD

Query:  SSSDSDNEVLKGEKKGEWIEGPVNASKLPL
                 +KGEK+GE IEG V   +LPL
Subjt:  SSSDSDNEVLKGEKKGEWIEGPVNASKLPL

XP_008437383.1 PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]1.0e-3477.48Show/hide
Query:  MASLQCNKPADHEYSQHQQKHDQQH-HHCFGGHVSDKIKGVF-KGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD
        MA  QC KPADH + QHQQKHDQQH HHCFGGHVSDKIKGVF KGHHH QA PA   VHHSAN SHCK +GSKKKKEH   KEGGL HKIK+AFSDHSSD
Subjt:  MASLQCNKPADHEYSQHQQKHDQQH-HHCFGGHVSDKIKGVF-KGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD

Query:  SSSDSDNEVLK
         SSDS+NE  K
Subjt:  SSSDSDNEVLK

XP_022146004.1 uncharacterized protein LOC111015315 [Momordica charantia]2.4e-2367.52Show/hide
Query:  MASLQCNKPADHEYSQHQQKHDQQHHHCFGGHVSDKIKGVFKGH-HHGQAPPAVAPVHHSANA-SHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD
        MASLQC+KPAD ++SQ+ QKHDQ   HCF GHVSDKIKGVFKGH HHGQAP A AP HHS N  ++   + S K+KE HKNK+G L HKIKDAFSDHSSD
Subjt:  MASLQCNKPADHEYSQHQQKHDQQHHHCFGGHVSDKIKGVFKGH-HHGQAPPAVAPVHHSANA-SHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD

Query:  SSSDSDNEVLKGEKKGE
         SSDSDNE  K  +K +
Subjt:  SSSDSDNEVLKGEKKGE

XP_022958513.1 glycine-rich cell wall structural protein 1-like [Cucurbita moschata]1.1e-0448.35Show/hide
Query:  HHCFGGHVSDKIKGVFKGHHH--------GQAPPAVAPVHH----SANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSDSSSDSD
        H   GGH      G   GH H        G   PA   V H    S N  HCK AG  +KK HHKNKEGG  +KIKDAFSDHS +S SD D
Subjt:  HHCFGGHVSDKIKGVFKGHHH--------GQAPPAVAPVHH----SANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSDSSSDSD

XP_038875375.1 uncharacterized protein LOC120067846 [Benincasa hispida]3.5e-4389.62Show/hide
Query:  MASLQCNKPADHEYSQHQQKHDQQHHHCFGGHVSDKIKGVFKGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSDSS
        MASLQCNKPADH+    QQKHDQQHHHCFGGHVSDKIKGVFKGHHHGQAP A APVHHSANASHCKP GSKKKKEHHKNKEGGL HKIKDAFSDHSSD S
Subjt:  MASLQCNKPADHEYSQHQQKHDQQHHHCFGGHVSDKIKGVFKGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSDSS

Query:  SDSDNE
        SDS+NE
Subjt:  SDSDNE

TrEMBL top hitse value%identityAlignment
A0A1S3AUH3 uncharacterized protein LOC1034828154.9e-3577.48Show/hide
Query:  MASLQCNKPADHEYSQHQQKHDQQH-HHCFGGHVSDKIKGVF-KGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD
        MA  QC KPADH + QHQQKHDQQH HHCFGGHVSDKIKGVF KGHHH QA PA   VHHSAN SHCK +GSKKKKEH   KEGGL HKIK+AFSDHSSD
Subjt:  MASLQCNKPADHEYSQHQQKHDQQH-HHCFGGHVSDKIKGVF-KGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD

Query:  SSSDSDNEVLK
         SSDS+NE  K
Subjt:  SSSDSDNEVLK

A0A5A7TMV4 Uncharacterized protein1.1e-2660Show/hide
Query:  MASLQCNKPADHEYSQHQQKHDQQH-HHCFGGHVSDKIKGVF-KGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD
        MA  QC KPADH + QHQQKHDQQH HHCFGGHVSDKIKGVF KGHHH QA PA   VHHSAN SHCK +GSKKKKEH   KEG                
Subjt:  MASLQCNKPADHEYSQHQQKHDQQH-HHCFGGHVSDKIKGVF-KGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD

Query:  SSSDSDNEVLKGEKKGEWIEGPVNASKLPL
                 +KGEK+GE IEG V   +LPL
Subjt:  SSSDSDNEVLKGEKKGEWIEGPVNASKLPL

A0A6J1CWW2 uncharacterized protein LOC1110153151.1e-2367.52Show/hide
Query:  MASLQCNKPADHEYSQHQQKHDQQHHHCFGGHVSDKIKGVFKGH-HHGQAPPAVAPVHHSANA-SHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD
        MASLQC+KPAD ++SQ+ QKHDQ   HCF GHVSDKIKGVFKGH HHGQAP A AP HHS N  ++   + S K+KE HKNK+G L HKIKDAFSDHSSD
Subjt:  MASLQCNKPADHEYSQHQQKHDQQHHHCFGGHVSDKIKGVFKGH-HHGQAPPAVAPVHHSANA-SHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSD

Query:  SSSDSDNEVLKGEKKGE
         SSDSDNE  K  +K +
Subjt:  SSSDSDNEVLKGEKKGE

A0A6J1H399 glycine-rich cell wall structural protein 1-like5.3e-0548.35Show/hide
Query:  HHCFGGHVSDKIKGVFKGHHH--------GQAPPAVAPVHH----SANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSDSSSDSD
        H   GGH      G   GH H        G   PA   V H    S N  HCK AG  +KK HHKNKEGG  +KIKDAFSDHS +S SD D
Subjt:  HHCFGGHVSDKIKGVFKGHHH--------GQAPPAVAPVHH----SANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSDSSSDSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCCTACAATGCAACAAACCAGCTGATCATGAGTACAGCCAGCACCAGCAGAAGCATGACCAACAACATCACCATTGCTTCGGCGGCCACGTCTCCGACAAGAT
CAAAGGTGTCTTCAAAGGCCACCATCACGGCCAGGCTCCACCGGCAGTGGCGCCGGTGCACCACTCTGCCAATGCCAGCCACTGCAAGCCAGCTGGGTCAAAGAAGAAGA
AGGAACACCACAAGAATAAAGAAGGAGGTTTGTTTCATAAGATCAAGGATGCCTTTTCTGACCACAGCAGTGACAGCAGCAGTGACAGTGATAATGAAGTACTGAAAGGA
GAGAAGAAAGGTGAATGGATTGAAGGACCGGTGAATGCCTCTAAACTACCTCTACTATTAGAATTTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCCTACAATGCAACAAACCAGCTGATCATGAGTACAGCCAGCACCAGCAGAAGCATGACCAACAACATCACCATTGCTTCGGCGGCCACGTCTCCGACAAGAT
CAAAGGTGTCTTCAAAGGCCACCATCACGGCCAGGCTCCACCGGCAGTGGCGCCGGTGCACCACTCTGCCAATGCCAGCCACTGCAAGCCAGCTGGGTCAAAGAAGAAGA
AGGAACACCACAAGAATAAAGAAGGAGGTTTGTTTCATAAGATCAAGGATGCCTTTTCTGACCACAGCAGTGACAGCAGCAGTGACAGTGATAATGAAGTACTGAAAGGA
GAGAAGAAAGGTGAATGGATTGAAGGACCGGTGAATGCCTCTAAACTACCTCTACTATTAGAATTTGAGTGAAGTAAAAATAAAGATACACGATGTAAAAATAAAGATGA
TTATTTATGCGACTTCTACTGTACCAACCTATTTTTCCATATTTGAAATAAAACTTCTCTATATAATGTAATTCAACGGAATCATTTCAAATACAATTCAGCTTTTCAAC
C
Protein sequenceShow/hide protein sequence
MASLQCNKPADHEYSQHQQKHDQQHHHCFGGHVSDKIKGVFKGHHHGQAPPAVAPVHHSANASHCKPAGSKKKKEHHKNKEGGLFHKIKDAFSDHSSDSSSDSDNEVLKG
EKKGEWIEGPVNASKLPLLLEFE