; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G002460 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G002460
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description40S ribosomal protein S10
Genome locationCiama_Chr01:2493169..2495068
RNA-Seq ExpressionCaUC01G002460
SyntenyCaUC01G002460
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005326 - Plectin/S10, N-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR037447 - 40S Ribosomal protein S10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016989.1 40S ribosomal protein S10-2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-9293.58Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE
        FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRG GGDFGDKGGAPADYRPSFG         GPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE

XP_011654726.1 40S ribosomal protein S10-1 [Cucumis sativus]1.6e-9495.19Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE
        FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFG         GPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE

XP_016898887.1 PREDICTED: 40S ribosomal protein S10-1 [Cucumis melo]1.4e-9394.65Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE
        FGGPSGDRPRGPSRFDGERRFGDRDGYRGG RGPGGDFGDKGGAPADYRPSFG         GPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE

XP_022158473.1 transcription factor MYB39-like [Momordica charantia]3.1e-9394.12Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE
        FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFG         GPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE

XP_038907155.1 40S ribosomal protein S10-1-like [Benincasa hispida]1.4e-9394.65Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR 
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE
        FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFG         GPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE

TrEMBL top hitse value%identityAlignment
A0A0A0KK65 S10_plectin domain-containing protein7.9e-9595.19Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE
        FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFG         GPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE

A0A1S4DSB0 40S ribosomal protein S10-16.7e-9494.65Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE
        FGGPSGDRPRGPSRFDGERRFGDRDGYRGG RGPGGDFGDKGGAPADYRPSFG         GPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE

A0A5A7TIX3 40S ribosomal protein S10-17.9e-9595.19Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE
        FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFG         GPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE

A0A6J1DW67 transcription factor MYB39-like1.5e-9394.12Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE
        FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFG         GPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE

A0A6J1ESX8 40S ribosomal protein S10-1-like1.3e-9293.58Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II EKNR+EISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE
        FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRG GGDFGDKGGAPADYRPSFG         GPGGRPGFGRGAGGYGGAPAPSNLE
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE

SwissProt top hitse value%identityAlignment
P0DKK8 40S ribosomal protein S10-11.8e-7275.39Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IIP+KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDF-GDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGR-GAGGYGGAPAPSNLE
        FG GP GDRPRGP RF+G+R RFGDRDGYRGGPRG  GDF G+KGGAPA+++PSF         +  GGRPGFGR G GG+G  P  S++E
Subjt:  FG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDF-GDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGR-GAGGYGGAPAPSNLE

P0DKK9 40S ribosomal protein S10-21.8e-7275.39Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        IIP+KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDF-GDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGR-GAGGYGGAPAPSNLE
        FG GP GDRPRGP RF+G+R RFGDRDGYRGGPRG  GDF G+KGGAPA+++PSF         +  GGRPGFGR G GG+G  P  S++E
Subjt:  FG-GPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDF-GDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGR-GAGGYGGAPAPSNLE

Q9FFS8 40S ribosomal protein S10-27.2e-6975.4Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        II E NR+EISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GR
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNL
        PFGG  GDRPRGP R DGERRFGDRDGYRGGP+  GG++GDK GAPADY+P F       G  G G R GFGRGAGG+GG  A S+L
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNL

Q9LTF2 40S ribosomal protein S10-31.4e-6774.59Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II E NRKEI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPS
        FGGP GDR RGP    G+R RFGDRDGYR GPR  G   G+KGGAPADY+PSF            G   GFGRGAGGY  A APS
Subjt:  FGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPS

Q9SW09 40S ribosomal protein S10-14.5e-7177.3Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II E NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPS
        FGGP GDR RGP R DG+R RFGDRDGYRGGPR  GGD  +KGGAPAD++PSF         +G GGRPGFGRGAGGY  A APS
Subjt:  FGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPS

Arabidopsis top hitse value%identityAlignment
AT4G25740.1 RNA binding Plectin/S10 domain-containing protein3.2e-7277.3Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II E NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPS
        FGGP GDR RGP R DG+R RFGDRDGYRGGPR  GGD  +KGGAPAD++PSF         +G GGRPGFGRGAGGY  A APS
Subjt:  FGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPS

AT4G25740.2 RNA binding Plectin/S10 domain-containing protein3.8e-5765.22Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II E NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPS
        FGGP                              GGD  +KGGAPAD++PSF         +G GGRPGFGRGAGGY  A APS
Subjt:  FGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPS

AT5G41520.1 RNA binding Plectin/S10 domain-containing protein5.1e-7075.4Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        II E NR+EISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GR
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNL
        PFGG  GDRPRGP R DGERRFGDRDGYRGGP+  GG++GDK GAPADY+P F       G  G G R GFGRGAGG+GG  A S+L
Subjt:  PFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNL

AT5G41520.2 RNA binding Plectin/S10 domain-containing protein1.4e-5176.06Show/hide
Query:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGA
        MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGP R DGERRFGDRDGYRGGP+  GG++GDK GA
Subjt:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGA

Query:  PADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNL
        PADY+P F       G  G G R GFGRGAGG+GG  A S+L
Subjt:  PADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNL

AT5G52650.1 RNA binding Plectin/S10 domain-containing protein9.7e-6974.59Show/hide
Query:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP
        II E NRKEI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GRP
Subjt:  IIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRP

Query:  FGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPS
        FGGP GDR RGP    G+R RFGDRDGYR GPR  G   G+KGGAPADY+PSF            G   GFGRGAGGY  A APS
Subjt:  FGGPSGDRPRGPSRFDGER-RFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATATCATTCCAGAGAAGAATCGCAAAGAAATTTCCAAGTACCTCTTTCAAGAGGGAGTTTGCTATGCCAAGAAGGACTACAATCTGGCTAAGCACCCG
GAAATCGATGTGCCAAATTTGCAAGTGATAAAGCTGATGCAGAGCTTCAAATCGAAGGAGTATGTTCGCGAGACATTTGCCTGGATGCACTACTACTGGTACCTC
ACGAACGATGGCATTGAATTTCTGAGGACTTATCTGAATCTCCCTTCAGAAATTGTCCCGGCTACCTTGAAGAAACAAGCCAAGCCGGCTGGTCGACCATTTGGT
GGCCCATCTGGAGACCGCCCACGTGGTCCATCAAGATTTGATGGAGAGAGAAGATTTGGTGACCGAGATGGCTACCGTGGAGGTCCTCGTGGACCTGGTGGTGAT
TTTGGTGATAAGGGTGGAGCCCCTGCTGATTACAGACCTTCATTCGGGTTTGCTCTCCCAGATGAGGGTTGTAAAGGTCCTGGTGGAAGGCCTGGATTTGGCCGT
GGAGCTGGTGGCTATGGTGGAGCACCTGCACCATCGAATCTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATATCATTCCAGAGAAGAATCGCAAAGAAATTTCCAAGTACCTCTTTCAAGAGGGAGTTTGCTATGCCAAGAAGGACTACAATCTGGCTAAGCACCCG
GAAATCGATGTGCCAAATTTGCAAGTGATAAAGCTGATGCAGAGCTTCAAATCGAAGGAGTATGTTCGCGAGACATTTGCCTGGATGCACTACTACTGGTACCTC
ACGAACGATGGCATTGAATTTCTGAGGACTTATCTGAATCTCCCTTCAGAAATTGTCCCGGCTACCTTGAAGAAACAAGCCAAGCCGGCTGGTCGACCATTTGGT
GGCCCATCTGGAGACCGCCCACGTGGTCCATCAAGATTTGATGGAGAGAGAAGATTTGGTGACCGAGATGGCTACCGTGGAGGTCCTCGTGGACCTGGTGGTGAT
TTTGGTGATAAGGGTGGAGCCCCTGCTGATTACAGACCTTCATTCGGGTTTGCTCTCCCAGATGAGGGTTGTAAAGGTCCTGGTGGAAGGCCTGGATTTGGCCGT
GGAGCTGGTGGCTATGGTGGAGCACCTGCACCATCGAATCTTGAATGAGAGAATGTCATAGATGTATGGGAGTGTTTTTGTTAGTTTTAGTTTCTAAGCAAATTG
AATCGAAGATGTTGAATTAAACTCTTGAGATCGTATCAGTTTTGTTTGCCTATAATTAATTGTCGGATCTTTGGCTGCTGAAGTCTGTTTGATGTCTCCTATTGC
AGATTTCTTTAATACTGTTCACACTTGTTTTAGATTATGAATTCATTAACTTATCCCGAAGCATTCTACTAGTTCACTGCCTGCCTCATCCATTTTCAATCATGG
CTGTTCTAGCATTGCATCTGTATGGTCTCCACATTTGTCTTACGGGGAAGACGATTCCTCTCTTGCATATATATTAGTGAATGCCAATTGAACACTGTACTTGAA
ACTAATAGCAACAATTGCTGTGGGAAGAGAATCCCACTTGCAAACTCTCCTTAAGTTGAAGGAGAAGAACCTTGGTATCTAAATGTGGTTATCACATACACAAGT
GGCCGAACAATGGTCTGTACTTTTGTTACTTTTGGGGGGAGATTGAAGCTTCCAGG
Protein sequenceShow/hide protein sequence
MENIIPEKNRKEISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFG
GPSGDRPRGPSRFDGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGFALPDEGCKGPGGRPGFGRGAGGYGGAPAPSNLE