; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G002500 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G002500
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionBeta-carotene 3-hydroxylase
Genome locationCiama_Chr01:2513381..2515767
RNA-Seq ExpressionCaUC01G002500
SyntenyCaUC01G002500
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042731.1 hypothetical protein E6C27_scaffold44G002300 [Cucumis melo var. makuwa]6.8e-1790.74Show/hide
Query:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF
        SL S+VQRQGMKNDSEGESVVTKEKADPIAAFS+PPPLPPLLGPLAV SLLET+
Subjt:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF

KAB2632780.1 hypothetical protein D8674_029027 [Pyrus ussuriensis x Pyrus communis]4.1e-0656.36Show/hide
Query:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETFS
        +LASS  ++   ND+    +VTKEK  P+ AFSRPPPLPP+ GPL + SLLET+S
Subjt:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETFS

KAE8647849.1 hypothetical protein Csa_000256 [Cucumis sativus]1.5e-1696.08Show/hide
Query:  SSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF
        S VQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLET+
Subjt:  SSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF

KAF3952198.1 hypothetical protein CMV_022222 [Castanea mollissima]6.4e-0760Show/hide
Query:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETFS
        ++A+S  ++   N+S  E  VTKEK DPI AFSRPPPLPP+LGPL   SLLET+S
Subjt:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETFS

KZN11958.1 hypothetical protein DCAR_004614 [Daucus carota subsp. sativus]4.1e-0658Show/hide
Query:  SVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF
        SV ++ + NDS GE ++ KEK DPI AFS+PPPLPP++GPL V SLL+++
Subjt:  SVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF

TrEMBL top hitse value%identityAlignment
A0A0A0KKH2 Uncharacterized protein3.0e-1894.44Show/hide
Query:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF
        SL S+VQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLET+
Subjt:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF

A0A166JAA1 Uncharacterized protein2.0e-0658Show/hide
Query:  SVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF
        SV ++ + NDS GE ++ KEK DPI AFS+PPPLPP++GPL V SLL+++
Subjt:  SVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF

A0A2N9IQZ8 Uncharacterized protein3.4e-0654.55Show/hide
Query:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETFS
        ++A+S+ ++   N++  E  +TKEK  PI AFSRPPPLPP+LGPL   SLLET+S
Subjt:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETFS

A0A5A7TME5 Uncharacterized protein3.3e-1790.74Show/hide
Query:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF
        SL S+VQRQGMKNDSEGESVVTKEKADPIAAFS+PPPLPPLLGPLAV SLLET+
Subjt:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETF

A0A5N5I573 Uncharacterized protein2.0e-0656.36Show/hide
Query:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETFS
        +LASS  ++   ND+    +VTKEK  P+ AFSRPPPLPP+ GPL + SLLET+S
Subjt:  SLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGTAGTCTGGCCTCATCAGTACAAAGGCAAGGAATGAAGAATGATTCTGAGGGAGAGTCTGTGGTTACCAAAGAGAAAGCAGACCCAATTGCAGCGTTCAGTAG
GCCTCCACCACTCCCTCCCCTTCTTGGTCCATTGGCTGTTTTCTCATTGTTAGAAACTTTTTCTTTCTTCATTTCTGATGTCAATGAAGGTGCAACCCTTAGTGAAGGGA
ATCTTCATAATCTCTCAATCATTTCTGATGGAGAATTTGCACTTGAACCTAGGAAGGAAAAGGAATCATTGTTTAAGCACGATGAGACGAAATGTAGCTTAACATCTGTG
GATAATCTGTCGTTCGCTTTCCTCTTCTTGCTGTTGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCGTAGTCTGGCCTCATCAGTACAAAGGCAAGGAATGAAGAATGATTCTGAGGGAGAGTCTGTGGTTACCAAAGAGAAAGCAGACCCAATTGCAGCGTTCAGTAG
GCCTCCACCACTCCCTCCCCTTCTTGGTCCATTGGCTGTTTTCTCATTGTTAGAAACTTTTTCTTTCTTCATTTCTGATGTCAATGAAGGTGCAACCCTTAGTGAAGGGA
ATCTTCATAATCTCTCAATCATTTCTGATGGAGAATTTGCACTTGAACCTAGGAAGGAAAAGGAATCATTGTTTAAGCACGATGAGACGAAATGTAGCTTAACATCTGTG
GATAATCTGTCGTTCGCTTTCCTCTTCTTGCTGTTGCCATAG
Protein sequenceShow/hide protein sequence
MDRSLASSVQRQGMKNDSEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETFSFFISDVNEGATLSEGNLHNLSIISDGEFALEPRKEKESLFKHDETKCSLTSV
DNLSFAFLFLLLP