; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G003360 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G003360
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionBHLH transcription factor
Genome locationCiama_Chr01:3605828..3607617
RNA-Seq ExpressionCaUC01G003360
SyntenyCaUC01G003360
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0090575 - RNA polymerase II transcription factor complex (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042815.1 transcription factor bHLH120-like protein [Cucumis melo var. makuwa]5.5e-9072.69Show/hide
Query:  FNVESPFSFDLGDDLFNLPSLPSSS-ISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPL
        FNVESPFSFDLG+DL  LPSLPSSS ISPP DN    VS+K KNGRR+K    P+T N++ G E LDEQKKKK+IHRDVERQRRQEMSSLYTTLRSLLPL
Subjt:  FNVESPFSFDLGDDLFNLPSLPSSS-ISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPL

Query:  EYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLEI
        EYLK KRSISDH+ ETV+YIQH+Q+RIQQL DKRD+LR+L++  M  I   +TLNSS RD VVVRAK G+GIQVV++TATKH+LP+S F+QAL AEGLEI
Subjt:  EYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLEI

Query:  LSCNSTKLNERFVHTIECQPIV-NDGCYPSIDVSELQHKLTNLEYFPLD
        L+C S +LNERF+HTIECQ I+ +DGCYP+ID S LQHKL NLEY+PLD
Subjt:  LSCNSTKLNERFVHTIECQPIV-NDGCYPSIDVSELQHKLTNLEYFPLD

KAG6579462.1 Transcription factor basic helix-loop-helix 120, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7864.48Show/hide
Query:  MEFNVESPFSFDLGDDLFNLPSL---------PSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSL
        MEFN+ESPFSFD+GD+LF LPS+         P     PP DNG    SK+ K   RR    PP+  N+EN     ++QK+KK++HRDVERQRRQEMSSL
Subjt:  MEFNVESPFSFDLGDDLFNLPSL---------PSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSL

Query:  YTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFL
        Y++LRSLLPLEYLK KRSISDH+HETV YIQ++Q+RI+QLSDKRDEL+ LS  NM A+ M +TLNSS RD VVVR+K GLGIQVV++T ++H+LPVSN L
Subjt:  YTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFL

Query:  QALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTN-LEYFPLD
        + LA EGLEILSC +TK+NER++H IECQ + NDG YPSIDV ELQHKLTN LEY PLD
Subjt:  QALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTN-LEYFPLD

KAG6579464.1 Transcription factor basic helix-loop-helix 126, partial [Cucurbita argyrosperma subsp. sororia]6.3e-7865.46Show/hide
Query:  MEFNVESPFSFDLGDDLFNLPSLPSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLP
        MEFN+ESPFSFD GD+LF LP L       P +N N + SKK K  RRRK   PP+T N+EN     +EQK+KK++HRDVERQRRQEMSSLY++LRSLLP
Subjt:  MEFNVESPFSFDLGDDLFNLPSLPSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLP

Query:  LEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLE
        LEYLK K SISDH+HETV YIQ IQ RI+QLSD+RDEL+ LS+ NM A+   +TLNSS RD VVV +K  LGIQVV++TAT+H++PVSN L+ L AEGLE
Subjt:  LEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLE

Query:  ILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLEYFPLD
        I+SC +TK+NER++HTIEC+ + N+GCYPSI+V EL+HKL NLEYFPLD
Subjt:  ILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLEYFPLD

NP_001295816.1 transcription factor bHLH118-like [Cucumis sativus]1.2e-8470Show/hide
Query:  FNVESPFSFDLGDDLFNLPSLPSSS-ISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPL
        FN ESPFSFD+G+DL  LPSLPSSS ISPP DN    VS+K KNGRR+K    P+T N++ G E  DEQKKKK+IHRDVERQRRQEMSSLYTTLRSLLPL
Subjt:  FNVESPFSFDLGDDLFNLPSLPSSS-ISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPL

Query:  EYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAIS-MAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLE
        EYLK KRSISDH+ ETV+YIQH+Q+RIQQL DKR  LR+L+     AI+   +TLNSS R   VVRAK G+GIQVV++TATK +LP+S F+QAL +EGLE
Subjt:  EYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAIS-MAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLE

Query:  ILSCNSTKLNERFVHTIECQPIVN-DGCYPSIDVSELQHKLTNLEYFPLD
        IL+C S +LNERF+HTIECQP++N DGCYP+IDVS LQHKL NLEY+PLD
Subjt:  ILSCNSTKLNERFVHTIECQPIVN-DGCYPSIDVSELQHKLTNLEYFPLD

XP_038875626.1 transcription factor bHLH118-like [Benincasa hispida]2.1e-9476.1Show/hide
Query:  MEFNVESPFSFDLGDDLFNLPSLPSSS-ISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLL
        M+FNVESP SFDLGDDL  LPSLPSSS IS P DN    VS+ QKNGRR+K   P     N+NG+E  +E++KKK+IHRDVERQRRQEMSSLYTTLRSLL
Subjt:  MEFNVESPFSFDLGDDLFNLPSLPSSS-ISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLL

Query:  PLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGL
        PLEYLK KRSISDHIHETVNYIQH+Q+RIQQLSDKRDELRKLS+G    +  AKTLNSS RD VVVR K G+GIQVVI+TATKH+ P+SNFLQALAAEGL
Subjt:  PLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGL

Query:  EILSCNSTKLNERFVHTIECQPIV-NDGCYPSIDVSELQHKLTNLEYFPLD
        EILSC S +LNERF+HTIECQPI+ NDG YP+IDV EL HKLTNLEYFPLD
Subjt:  EILSCNSTKLNERFVHTIECQPIV-NDGCYPSIDVSELQHKLTNLEYFPLD

TrEMBL top hitse value%identityAlignment
A0A097IYN6 BHLH transcription factor5.7e-8570Show/hide
Query:  FNVESPFSFDLGDDLFNLPSLPSSS-ISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPL
        FN ESPFSFD+G+DL  LPSLPSSS ISPP DN    VS+K KNGRR+K    P+T N++ G E  DEQKKKK+IHRDVERQRRQEMSSLYTTLRSLLPL
Subjt:  FNVESPFSFDLGDDLFNLPSLPSSS-ISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPL

Query:  EYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAIS-MAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLE
        EYLK KRSISDH+ ETV+YIQH+Q+RIQQL DKR  LR+L+     AI+   +TLNSS R   VVRAK G+GIQVV++TATK +LP+S F+QAL +EGLE
Subjt:  EYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAIS-MAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLE

Query:  ILSCNSTKLNERFVHTIECQPIVN-DGCYPSIDVSELQHKLTNLEYFPLD
        IL+C S +LNERF+HTIECQP++N DGCYP+IDVS LQHKL NLEY+PLD
Subjt:  ILSCNSTKLNERFVHTIECQPIVN-DGCYPSIDVSELQHKLTNLEYFPLD

A0A5A7TLF7 Transcription factor bHLH36-like3.2e-6757.59Show/hide
Query:  NVESPFSFDLGDDLFNLPSLP--SSSISPPF-------DNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTT
        NVESPFSFDLGD+L  LPSL    +   P F       +N ++ VS + KNGRR+K   P +T ++++     +E KKKK++HRDVERQRRQEMSSLY+T
Subjt:  NVESPFSFDLGDDLFNLPSLP--SSSISPPF-------DNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTT

Query:  LRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDA-ISMAKTLNSSHRDFVVVRAKKGL-GIQVVINTATKHKLPVSNFLQ
        LRSLLP+EYLK KRSI DH+HETV YI+++Q +IQ+L DKRDEL+KL   N +  +   +TL S+ RD VVVRA+ G  GIQV+++TAT+H+LP+SN L 
Subjt:  LRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDA-ISMAKTLNSSHRDFVVVRAKKGL-GIQVVINTATKHKLPVSNFLQ

Query:  ALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLEYFPLD
        AL  +GLEILSC+S KLN+RF+HTIE QP+      P IDVS LQ+ LTNLEY PLD
Subjt:  ALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLEYFPLD

A0A5A7TN30 Transcription factor bHLH120-like protein2.7e-9072.69Show/hide
Query:  FNVESPFSFDLGDDLFNLPSLPSSS-ISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPL
        FNVESPFSFDLG+DL  LPSLPSSS ISPP DN    VS+K KNGRR+K    P+T N++ G E LDEQKKKK+IHRDVERQRRQEMSSLYTTLRSLLPL
Subjt:  FNVESPFSFDLGDDLFNLPSLPSSS-ISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPL

Query:  EYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLEI
        EYLK KRSISDH+ ETV+YIQH+Q+RIQQL DKRD+LR+L++  M  I   +TLNSS RD VVVRAK G+GIQVV++TATKH+LP+S F+QAL AEGLEI
Subjt:  EYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLEI

Query:  LSCNSTKLNERFVHTIECQPIV-NDGCYPSIDVSELQHKLTNLEYFPLD
        L+C S +LNERF+HTIECQ I+ +DGCYP+ID S LQHKL NLEY+PLD
Subjt:  LSCNSTKLNERFVHTIECQPIV-NDGCYPSIDVSELQHKLTNLEYFPLD

A0A6J1E8G7 transcription factor bHLH118-like1.3e-7663.71Show/hide
Query:  MEFNVESPFSFDLGDDLFNLPSLPS----------SSISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSS
        MEFN+ESP SFDLGD+LF LPS+ S           SISP  ++ +   SK+ K   RR    PP+  N+EN     ++QK+KK++HRDVERQRRQEMSS
Subjt:  MEFNVESPFSFDLGDDLFNLPSLPS----------SSISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSS

Query:  LYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNF
        LY++LRSLLPLEYLK K SISDH+HETV YIQ++Q+RI+QLSDKRDEL+ LS  NM A+ M +TLNSS RD VVVR+K GLGIQVV++T T+H+LPVSN 
Subjt:  LYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNF

Query:  LQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLEYFPLD
        L+ LA EGLEILSC + K+NER++HTIECQ + +DG YPSIDV ELQHKLTNLEY PLD
Subjt:  LQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLEYFPLD

A0A6J1I182 transcription factor bHLH120-like3.7e-7663.86Show/hide
Query:  MEFNVESPFSFDLGDDLFNLPSLPSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLP
        MEFN+ESPFSF+ GD+LF LP +       P +N N + SKK K   RR+   PP+T N+EN     +EQK+KK++HRDVERQRRQEMSSLY++LRSLLP
Subjt:  MEFNVESPFSFDLGDDLFNLPSLPSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLP

Query:  LEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLE
        LEYLK KRSISDH+HETV YIQ IQ RIQQLS++RDEL+ LS  NM  +   +TLNSS RD VVV +  GLGIQVV++TA +H+LPVS+ LQ L AEGLE
Subjt:  LEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLE

Query:  ILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLEYFPLD
        I+SC +TK+NER++HTIECQ + NDGCYPSIDV EL+H+L NLEY PL+
Subjt:  ILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLEYFPLD

SwissProt top hitse value%identityAlignment
Q9FLI0 Transcription factor bHLH1206.0e-2336.13Show/hide
Query:  PPDTHNNENGSEVLDEQKK-KKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMA
        P  T +  +  +  DE KK KKL+HR++ERQRRQEM+ L+ +LRS LPL+Y+K KR++SDH++  V++I+  Q RI+ LS +RDEL++            
Subjt:  PPDTHNNENGSEVLDEQKK-KKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMA

Query:  KTLNSSHRDFVVVRAKKGL-GIQVVINTATK--HKLPVSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKL
            SS  +   V  +  + G +VV+++        P+S  L+ L  +GLE++S  + ++NER ++TI+    V    +   D++ LQ KL
Subjt:  KTLNSSHRDFVVVRAKKGL-GIQVVINTATK--HKLPVSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKL

Q9FLI1 Transcription factor bHLH369.3e-2439.46Show/hide
Query:  KKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDF----------
        +K++HR+ ERQRRQEM+SLY +LRSLLPL ++K KRS SD ++E VNYI+++Q++I++LS +RD+L  LS G++        L SS+ DF          
Subjt:  KKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDF----------

Query:  --VVVRAKKGLGIQVVINTATKHKLP-VSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLE
          VVVR +  +G+++++++      P  S+ LQ L+  GL +L+  S+ +++R V+TI+ +  VND     ID++EL+ +L  ++
Subjt:  --VVVRAKKGLGIQVVINTATKHKLP-VSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLE

Q9LN95 Transcription factor bHLH558.4e-2539.13Show/hide
Query:  DEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRK-----LSDGNMDAISMAKTLNSSHRD-
        DE K K+  H+++ERQRRQE +SL+  LR LLP +Y+K KRS +DH+ E VNYI+ +QK+I+++S+KRD +++      S G     S+A +  S   D 
Subjt:  DEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRK-----LSDGNMDAISMAKTLNSSHRD-

Query:  -FVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEG-LEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNL
           VV     +G+++V++   +H+  +S+ LQ LA E    I+SC ST+L++ F+HTI  +  V +G    +  SELQ K+  +
Subjt:  -FVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEG-LEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNL

Q9LQ08 Transcription factor bHLH1252.1e-2334.82Show/hide
Query:  LFNLPSLPSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPD-THNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIH
        LF+   L S  IS  + N ++  S   K G   KK +  D T+     ++  D+++ KK+ HRD+ERQRRQE+SSL+  LR+LLP +Y++ KRS SDHI 
Subjt:  LFNLPSLPSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPD-THNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIH

Query:  ETVNYIQHIQKRIQQLSDKRDELRKLSDGNMD------------AISMAKTLNSS-----HRDFVVVRAKKGLGIQVVINTAT-KHKLPVSNFLQALAAE
        + VNYI+ +Q +I++L++KR+ ++K+                  + S A TL+SS      +   VV     +G++++I+    ++K  +S+ LQ LA E
Subjt:  ETVNYIQHIQKRIQQLSDKRDELRKLSDGNMD------------AISMAKTLNSS-----HRDFVVVRAKKGLGIQVVINTAT-KHKLPVSNFLQALAAE

Query:  -GLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNL
            ++SC S +  +RF+HTI  Q  V DG    I++ EL+ K+  +
Subjt:  -GLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNL

Q9STJ6 Transcription factor bHLH1262.8e-2841.99Show/hide
Query:  EVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDEL-RKLSDG---NMDAISMAKTLNSSHR
        E  D +KKKKL+HRD+ERQRRQEM++L+ TLR+ LPL+Y+K KR++SDH++  VN+I+  + RI++LS +RDEL R+   G   N D       +  S  
Subjt:  EVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDEL-RKLSDG---NMDAISMAKTLNSSHR

Query:  DFVVVRAK-KGLGIQVVINTATKHKLPVSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKL
          V+V+    GL + V  N++    LP+S  L+ +  +GLE++S  +T++N+R +HTI+ + + + GC   ID+  LQ KL
Subjt:  DFVVVRAK-KGLGIQVVINTATKHKLPVSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKL

Arabidopsis top hitse value%identityAlignment
AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.9e-2639.13Show/hide
Query:  DEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRK-----LSDGNMDAISMAKTLNSSHRD-
        DE K K+  H+++ERQRRQE +SL+  LR LLP +Y+K KRS +DH+ E VNYI+ +QK+I+++S+KRD +++      S G     S+A +  S   D 
Subjt:  DEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRK-----LSDGNMDAISMAKTLNSSHRD-

Query:  -FVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEG-LEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNL
           VV     +G+++V++   +H+  +S+ LQ LA E    I+SC ST+L++ F+HTI  +  V +G    +  SELQ K+  +
Subjt:  -FVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEG-LEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNL

AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-2434.82Show/hide
Query:  LFNLPSLPSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPD-THNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIH
        LF+   L S  IS  + N ++  S   K G   KK +  D T+     ++  D+++ KK+ HRD+ERQRRQE+SSL+  LR+LLP +Y++ KRS SDHI 
Subjt:  LFNLPSLPSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPD-THNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIH

Query:  ETVNYIQHIQKRIQQLSDKRDELRKLSDGNMD------------AISMAKTLNSS-----HRDFVVVRAKKGLGIQVVINTAT-KHKLPVSNFLQALAAE
        + VNYI+ +Q +I++L++KR+ ++K+                  + S A TL+SS      +   VV     +G++++I+    ++K  +S+ LQ LA E
Subjt:  ETVNYIQHIQKRIQQLSDKRDELRKLSDGNMD------------AISMAKTLNSS-----HRDFVVVRAKKGLGIQVVINTAT-KHKLPVSNFLQALAAE

Query:  -GLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNL
            ++SC S +  +RF+HTI  Q  V DG    I++ EL+ K+  +
Subjt:  -GLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNL

AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.0e-2941.99Show/hide
Query:  EVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDEL-RKLSDG---NMDAISMAKTLNSSHR
        E  D +KKKKL+HRD+ERQRRQEM++L+ TLR+ LPL+Y+K KR++SDH++  VN+I+  + RI++LS +RDEL R+   G   N D       +  S  
Subjt:  EVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDEL-RKLSDG---NMDAISMAKTLNSSHR

Query:  DFVVVRAK-KGLGIQVVINTATKHKLPVSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKL
          V+V+    GL + V  N++    LP+S  L+ +  +GLE++S  +T++N+R +HTI+ + + + GC   ID+  LQ KL
Subjt:  DFVVVRAK-KGLGIQVVINTATKHKLPVSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKL

AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.6e-2539.46Show/hide
Query:  KKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDF----------
        +K++HR+ ERQRRQEM+SLY +LRSLLPL ++K KRS SD ++E VNYI+++Q++I++LS +RD+L  LS G++        L SS+ DF          
Subjt:  KKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDF----------

Query:  --VVVRAKKGLGIQVVINTATKHKLP-VSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLE
          VVVR +  +G+++++++      P  S+ LQ L+  GL +L+  S+ +++R V+TI+ +  VND     ID++EL+ +L  ++
Subjt:  --VVVRAKKGLGIQVVINTATKHKLP-VSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKLTNLE

AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.3e-2436.13Show/hide
Query:  PPDTHNNENGSEVLDEQKK-KKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMA
        P  T +  +  +  DE KK KKL+HR++ERQRRQEM+ L+ +LRS LPL+Y+K KR++SDH++  V++I+  Q RI+ LS +RDEL++            
Subjt:  PPDTHNNENGSEVLDEQKK-KKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSISDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMA

Query:  KTLNSSHRDFVVVRAKKGL-GIQVVINTATK--HKLPVSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKL
            SS  +   V  +  + G +VV+++        P+S  L+ L  +GLE++S  + ++NER ++TI+    V    +   D++ LQ KL
Subjt:  KTLNSSHRDFVVVRAKKGL-GIQVVINTATK--HKLPVSNFLQALAAEGLEILSCNSTKLNERFVHTIECQPIVNDGCYPSIDVSELQHKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCAATGTTGAGTCCCCCTTCTCATTTGATTTAGGAGATGACCTATTTAATCTGCCTTCTCTTCCATCGTCTTCTATCTCTCCGCCCTTCGACAATGGTAACCT
CGTCGTGTCCAAAAAGCAAAAAAATGGCCGCCGACGAAAGAAGACAGCGCCGCCCGACACTCACAACAATGAAAATGGCAGTGAGGTTTTGGATGAACAGAAAAAGAAGA
AGTTAATACATAGAGATGTGGAGCGACAAAGAAGACAAGAAATGTCTTCTCTTTACACCACTCTTCGCTCACTTCTCCCTCTTGAATACCTCAAGGATAAAAGGTCAATA
TCCGACCATATACATGAGACAGTTAATTACATTCAACATATACAAAAAAGAATCCAACAATTGTCTGATAAAAGAGATGAGCTAAGAAAACTCTCCGACGGAAACATGGA
TGCCATCAGTATGGCAAAAACGCTTAACTCCTCGCATAGGGACTTTGTGGTGGTGAGGGCGAAAAAAGGATTAGGAATTCAAGTTGTTATAAACACGGCCACAAAACACA
AGCTCCCTGTTTCCAACTTCCTTCAAGCTTTAGCTGCTGAAGGGCTCGAAATCCTTAGCTGCAATTCGACCAAGCTAAACGAGAGGTTCGTCCACACCATAGAATGCCAA
CCTATTGTAAATGATGGCTGCTATCCAAGCATTGATGTTTCTGAGCTTCAACATAAGTTAACAAATTTGGAATATTTTCCTTTAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCAATGTTGAGTCCCCCTTCTCATTTGATTTAGGAGATGACCTATTTAATCTGCCTTCTCTTCCATCGTCTTCTATCTCTCCGCCCTTCGACAATGGTAACCT
CGTCGTGTCCAAAAAGCAAAAAAATGGCCGCCGACGAAAGAAGACAGCGCCGCCCGACACTCACAACAATGAAAATGGCAGTGAGGTTTTGGATGAACAGAAAAAGAAGA
AGTTAATACATAGAGATGTGGAGCGACAAAGAAGACAAGAAATGTCTTCTCTTTACACCACTCTTCGCTCACTTCTCCCTCTTGAATACCTCAAGGATAAAAGGTCAATA
TCCGACCATATACATGAGACAGTTAATTACATTCAACATATACAAAAAAGAATCCAACAATTGTCTGATAAAAGAGATGAGCTAAGAAAACTCTCCGACGGAAACATGGA
TGCCATCAGTATGGCAAAAACGCTTAACTCCTCGCATAGGGACTTTGTGGTGGTGAGGGCGAAAAAAGGATTAGGAATTCAAGTTGTTATAAACACGGCCACAAAACACA
AGCTCCCTGTTTCCAACTTCCTTCAAGCTTTAGCTGCTGAAGGGCTCGAAATCCTTAGCTGCAATTCGACCAAGCTAAACGAGAGGTTCGTCCACACCATAGAATGCCAA
CCTATTGTAAATGATGGCTGCTATCCAAGCATTGATGTTTCTGAGCTTCAACATAAGTTAACAAATTTGGAATATTTTCCTTTAGATTAA
Protein sequenceShow/hide protein sequence
MEFNVESPFSFDLGDDLFNLPSLPSSSISPPFDNGNLVVSKKQKNGRRRKKTAPPDTHNNENGSEVLDEQKKKKLIHRDVERQRRQEMSSLYTTLRSLLPLEYLKDKRSI
SDHIHETVNYIQHIQKRIQQLSDKRDELRKLSDGNMDAISMAKTLNSSHRDFVVVRAKKGLGIQVVINTATKHKLPVSNFLQALAAEGLEILSCNSTKLNERFVHTIECQ
PIVNDGCYPSIDVSELQHKLTNLEYFPLD