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CaUC01G003630 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G003630
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCiama_Chr01:3940860..3941941
RNA-Seq ExpressionCaUC01G003630
SyntenyCaUC01G003630
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9614187.1 putative endopeptidase Clp [Lupinus albus]1.1e-0748.72Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISCSGR---------------------KALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN + N+LLRI DYL    + +                     +AL+YGLI+R+VRPPRIK DAPRKD GT LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISCSGR---------------------KALDYGLINRMVRPPRIKGDAPRKDVGTVLG
KAF1872524.1 hypothetical protein Lal_00016826 [Lupinus albus]1.1e-0748.72Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISCSGR---------------------KALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN + N+LLRI DYL    + +                     +AL+YGLI+R+VRPPRIK DAPRKD GT LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISCSGR---------------------KALDYGLINRMVRPPRIKGDAPRKDVGTVLG
XP_008437161.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo]6.3e-0850Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISCS---------------------GRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN + N+LLRI DYL    S                      ++ALDYGLI+R+ RPPRIK DAPRKD GT LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISCS---------------------GRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
XP_022158384.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Momordica charantia]2.2e-0851.28Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISCS---------------------GRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN + N+LLRI DYL    S                      ++ALDYGLI+R+VRPPRIK DAPRKD GT LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISCS---------------------GRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
XP_038906920.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Benincasa hispida]2.8e-0851.28Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISCS---------------------GRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN + N+LLRI DYL    S                      ++ALDYGLI+R+VRPPRIK DAPRKD GT LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISCS---------------------GRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
TrEMBL top hitse value%identityAlignment
A0A1S3ATH1 ATP-dependent Clp protease proteolytic subunit3.0e-0850Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISCS---------------------GRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN + N+LLRI DYL    S                      ++ALDYGLI+R+ RPPRIK DAPRKD GT LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISCS---------------------GRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
A0A6A4QL77 ATP-dependent Clp protease proteolytic subunit5.2e-0848.72Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISCSGR---------------------KALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN + N+LLRI DYL    + +                     +AL+YGLI+R+VRPPRIK DAPRKD GT LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISCSGR---------------------KALDYGLINRMVRPPRIKGDAPRKDVGTVLG
A0A6A5MD20 ATP-dependent Clp protease proteolytic subunit5.2e-0848.72Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISCSGR---------------------KALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN + N+LLRI DYL    + +                     +AL+YGLI+R+VRPPRIK DAPRKD GT LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISCSGR---------------------KALDYGLINRMVRPPRIKGDAPRKDVGTVLG
A0A6A5MQR4 ATP-dependent Clp protease proteolytic subunit5.2e-0848.72Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISCSGR---------------------KALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN + N+LLRI DYL    + +                     +AL+YGLI+R+VRPPRIK DAPRKD GT LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISCSGR---------------------KALDYGLINRMVRPPRIKGDAPRKDVGTVLG
A0A6J1DZ88 ATP-dependent Clp protease proteolytic subunit1.0e-0851.28Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISCS---------------------GRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN + N+LLRI DYL    S                      ++ALDYGLI+R+VRPPRIK DAPRKD GT LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISCS---------------------GRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
SwissProt top hitse value%identityAlignment
Q9XJ36 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic3.6e-0639.74Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISC---------------------SGRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN +  +L RI DYL                         +  +A++YGLI+++VRPPRIK DAPR+D    LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISC---------------------SGRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
Arabidopsis top hitse value%identityAlignment
AT1G12410.1 CLP protease proteolytic subunit 22.5e-0739.74Show/hide
Query:  ADDIQNDQVNQLLRIMDYLLISC---------------------SGRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG
        ADDIQN +  +L RI DYL                         +  +A++YGLI+++VRPPRIK DAPR+D    LG
Subjt:  ADDIQNDQVNQLLRIMDYLLISC---------------------SGRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTGGCTGATGATATTCAAAATGATCAAGTAAACCAGCTCTTGAGAATCATGGATTATCTTTTGATATCATGCTCTGGTCGTAAAGCTCTTGATTATGGACTTAT
CAACCGTATGGTTAGGCCACCTCGCATTAAGGGTGATGCACCTCGCAAGGATGTTGGAACAGTGCTTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTTGGCTGATGATATTCAAAATGATCAAGTAAACCAGCTCTTGAGAATCATGGATTATCTTTTGATATCATGCTCTGGTCGTAAAGCTCTTGATTATGGACTTAT
CAACCGTATGGTTAGGCCACCTCGCATTAAGGGTGATGCACCTCGCAAGGATGTTGGAACAGTGCTTGGTTAG
Protein sequenceShow/hide protein sequence
MILADDIQNDQVNQLLRIMDYLLISCSGRKALDYGLINRMVRPPRIKGDAPRKDVGTVLG