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CaUC01G003640 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G003640
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionprotein cornichon homolog 4-like
Genome locationCiama_Chr01:3942695..3944913
RNA-Seq ExpressionCaUC01G003640
SyntenyCaUC01G003640
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003377 - Cornichon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022922295.1 protein cornichon homolog 4-like [Cucurbita moschata]2.2e-5594.69Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHWIMSLFCVPYLYYN+RLYTQRKHLVDVTEIFNQLPWEKKQRLFKL+YLVSL+FLSI
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHDS
        FWLIYSALEDH+S
Subjt:  FWLIYSALEDHDS

XP_022957749.1 protein cornichon homolog 4-like [Cucurbita moschata]4.8e-5593.81Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHWIMS FCVPYLYYNLRLYTQR+HLVDVTEIFNQLPWEKK+RLFKL+YL+SLLFLSI
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHDS
        FWLIYSALEDHDS
Subjt:  FWLIYSALEDHDS

XP_022996131.1 protein cornichon homolog 4-like [Cucurbita maxima]2.8e-5594.69Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLL+GHWIMS FC+PYLYYNLRLYTQRKHLVDVTEIFNQLPWEKK+RLFKL+YL+SLLFLSI
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHDS
        FWLIYSALEDHDS
Subjt:  FWLIYSALEDHDS

XP_023532889.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]1.3e-5595.58Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLL+GHWIMS FCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKK+RLFKL+YL+SLLFLSI
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHDS
        FWLIYSALEDHDS
Subjt:  FWLIYSALEDHDS

XP_038907022.1 protein cornichon homolog 4-like [Benincasa hispida]1.5e-5698.23Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFC+PYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHDS
        FWLIYSALEDH+S
Subjt:  FWLIYSALEDHDS

TrEMBL top hitse value%identityAlignment
A0A0A0KMS0 Uncharacterized protein2.0e-5493.81Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHW+MSL C+P LYYNLR+YTQRKHLVDVTEIFNQLPWEKKQRLFKL+YLVSLLFLSI
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHDS
        FWLIYSALEDH+S
Subjt:  FWLIYSALEDHDS

A0A6J1E8A9 protein cornichon homolog 4-like1.0e-5594.69Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHWIMSLFCVPYLYYN+RLYTQRKHLVDVTEIFNQLPWEKKQRLFKL+YLVSL+FLSI
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHDS
        FWLIYSALEDH+S
Subjt:  FWLIYSALEDHDS

A0A6J1H2W0 protein cornichon homolog 4-like2.3e-5593.81Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCIFYLL+GHWIMS FCVPYLYYNLRLYTQR+HLVDVTEIFNQLPWEKK+RLFKL+YL+SLLFLSI
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHDS
        FWLIYSALEDHDS
Subjt:  FWLIYSALEDHDS

A0A6J1I130 protein cornichon homolog 4-like2.6e-5492.92Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC FYLL+GHWIMSLFCVPYLYYN+RLYTQRKHLVDVTEIFNQL WEKKQRLFKL+YLVSL+FLSI
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHDS
        FWLIYSALEDH+S
Subjt:  FWLIYSALEDHDS

A0A6J1K131 protein cornichon homolog 4-like1.4e-5594.69Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLL+GHWIMS FC+PYLYYNLRLYTQRKHLVDVTEIFNQLPWEKK+RLFKL+YL+SLLFLSI
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHDS
        FWLIYSALEDHDS
Subjt:  FWLIYSALEDHDS

SwissProt top hitse value%identityAlignment
Q3EDD7 Probable protein cornichon homolog 25.6e-4672.65Show/hide
Query:  NPTISLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSL
        N    L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+L C+PYLYYN  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  
Subjt:  NPTISLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSL

Query:  LFLSIFWLIYSALEDHD
        LFL+IFW+IYSAL+D++
Subjt:  LFLSIFWLIYSALEDHD

Q84W04 Protein cornichon homolog 49.5e-4675Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+L C+PYLYYN  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  LFL+I
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHD
        FW+IYSAL+D++
Subjt:  FWLIYSALEDHD

Q8GWT5 Protein cornichon homolog 33.7e-4269.64Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        L+ LADLEFDYINPYDS+SRIN VV+PE I QG LC+FYL++GHW M+L CVPYLYYN  LY++++HL+DVTEIFN L WEKK+RLFKL Y++  LFL+I
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHD
        FWLIYS L+D++
Subjt:  FWLIYSALEDHD

Q9C7D7 Protein cornichon homolog 16.0e-2446.55Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        ++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ +LL+ HW+  L  VP   Y+  LY +R++L+DVTE+F  + +EKK R  KL + V L  + +
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWL----IYSALEDHD
        F L    +YS  ED D
Subjt:  FWL----IYSALEDHD

Q9SZ74 Protein cornichon homolog 57.1e-3355.45Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        L CLADLEFD INPYD SSRIN++V+PEF  QG+LC++Y+L+GHW M++  +P+L+YN+RLY +R+HL DVTE++N   WE+K+R++K+ ++   +F++ 
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALED
        +WLI+SAL D
Subjt:  FWLIYSALED

Arabidopsis top hitse value%identityAlignment
AT1G12340.1 Cornichon family protein4.0e-4772.65Show/hide
Query:  NPTISLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSL
        N    L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+L C+PYLYYN  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  
Subjt:  NPTISLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSL

Query:  LFLSIFWLIYSALEDHD
        LFL+IFW+IYSAL+D++
Subjt:  LFLSIFWLIYSALEDHD

AT1G12390.1 Cornichon family protein6.7e-4775Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+L C+PYLYYN  LY++R+HLVDVTEIFN L WEKK+RLFKL Y+V  LFL+I
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHD
        FW+IYSAL+D++
Subjt:  FWLIYSALEDHD

AT1G62880.1 Cornichon family protein2.7e-4369.64Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        L+ LADLEFDYINPYDS+SRIN VV+PE I QG LC+FYL++GHW M+L CVPYLYYN  LY++++HL+DVTEIFN L WEKK+RLFKL Y++  LFL+I
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALEDHD
        FWLIYS L+D++
Subjt:  FWLIYSALEDHD

AT3G12180.1 Cornichon family protein4.3e-2546.55Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        ++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ +LL+ HW+  L  VP   Y+  LY +R++L+DVTE+F  + +EKK R  KL + V L  + +
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWL----IYSALEDHD
        F L    +YS  ED D
Subjt:  FWL----IYSALEDHD

AT4G12090.1 Cornichon family protein5.0e-3455.45Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI
        L CLADLEFD INPYD SSRIN++V+PEF  QG+LC++Y+L+GHW M++  +P+L+YN+RLY +R+HL DVTE++N   WE+K+R++K+ ++   +F++ 
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSI

Query:  FWLIYSALED
        +WLI+SAL D
Subjt:  FWLIYSALED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATCGCGAGACGAGACACGGGCACACAAGTTTAGGGCATTACTATGGCTGATATCTACGTCTGGCTTCTCTCCTTCTTCTTTATCATTGCGCTTCTCATAC
TCGTCGTTTTCCAGGTTCTCTCTAAACCCTACAATTTCTCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCCTCATCACGGATAAAC
AAAGTGGTTGTGCCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTTTTGTCAGGGCATTGGATTATGTCATTATTTTGTGTGCCCTACCTCTATTAT
AATTTAAGATTGTACACTCAGCGAAAGCACCTGGTAGATGTTACTGAGATATTTAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTTATCTATCTT
GTTTCTCTTCTCTTTCTTTCCATATTTTGGTTAATTTACAGTGCGTTGGAGGATCATGATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGATCGCGAGACGAGACACGGGCACACAAGTTTAGGGCATTACTATGGCTGATATCTACGTCTGGCTTCTCTCCTTCTTCTTTATCATTGCGCTTCTCATAC
TCGTCGTTTTCCAGGTTCTCTCTAAACCCTACAATTTCTCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCCTCATCACGGATAAAC
AAAGTGGTTGTGCCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTTTTGTCAGGGCATTGGATTATGTCATTATTTTGTGTGCCCTACCTCTATTAT
AATTTAAGATTGTACACTCAGCGAAAGCACCTGGTAGATGTTACTGAGATATTTAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTTATCTATCTT
GTTTCTCTTCTCTTTCTTTCCATATTTTGGTTAATTTACAGTGCGTTGGAGGATCATGATTCTTGAATAGATTCTGCAAAGTGCAAATTGTTGTCTTGTAGGAGA
TAATGTCACTGTACGGCTCACTACAAAGCTTTGTGTACTTATCTTAGGGTATCTTCTTGTGTTGTAATTTTGGACAAATAATTGCCTTGTGAGTAAGGTCTAAAG
TTTTTGATTGTCACTATATGCTGCCCCTGTTTTGCGGTGCTGTCCATAAACGAAAATATTAAAAAACATAAATACGAGATTCTTGTTATGTTTATAGAAAGCCTT
CATACACGATGTAAGTGAATAGAGTTGTTTATTTATGGACTGACACTACAACAGATATTAATTTTCA
Protein sequenceShow/hide protein sequence
MRSRDETRAHKFRALLWLISTSGFSPSSLSLRFSYSSFSRFSLNPTISLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCVPYLYY
NLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLLFLSIFWLIYSALEDHDS