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CaUC01G005160 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G005160
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDNA helicase
Genome locationCiama_Chr01:5412286..5414409
RNA-Seq ExpressionCaUC01G005160
SyntenyCaUC01G005160
Gene Ontology termsGO:0000725 - recombinational repair (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0036292 - DNA rewinding (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158784.1 ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1 [Momordica charantia]3.1e-1684.75Show/hide
Query:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        Q   +HFQKLRIENAMGSSAPTAKQ     ISYLRNLGCTITPTSRLHASSLIEQYKSL
Subjt:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
XP_022158805.1 ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X5 [Momordica charantia]3.1e-1684.75Show/hide
Query:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        Q   +HFQKLRIENAMGSSAPTAKQ     ISYLRNLGCTITPTSRLHASSLIEQYKSL
Subjt:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
XP_022158809.1 ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X6 [Momordica charantia]3.1e-1684.75Show/hide
Query:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        Q   +HFQKLRIENAMGSSAPTAKQ     ISYLRNLGCTITPTSRLHASSLIEQYKSL
Subjt:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
XP_038907257.1 ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1 [Benincasa hispida]3.1e-1684.75Show/hide
Query:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        Q   +HFQKLRIENAMGSSAPTAKQ     ISYLRNLGCTITPTSRLHASSLIEQYKSL
Subjt:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
XP_038907259.1 ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X2 [Benincasa hispida]3.1e-1684.75Show/hide
Query:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        Q   +HFQKLRIENAMGSSAPTAKQ     ISYLRNLGCTITPTSRLHASSLIEQYKSL
Subjt:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
TrEMBL top hitse value%identityAlignment
A0A6J1DWV4 DNA helicase1.5e-1684.75Show/hide
Query:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        Q   +HFQKLRIENAMGSSAPTAKQ     ISYLRNLGCTITPTSRLHASSLIEQYKSL
Subjt:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
A0A6J1E0F2 DNA helicase1.5e-1684.75Show/hide
Query:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        Q   +HFQKLRIENAMGSSAPTAKQ     ISYLRNLGCTITPTSRLHASSLIEQYKSL
Subjt:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
A0A6J1E0F7 DNA helicase1.5e-1684.75Show/hide
Query:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        Q   +HFQKLRIENAMGSSAPTAKQ     ISYLRNLGCTITPTSRLHASSLIEQYKSL
Subjt:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
A0A6J1E0H8 DNA helicase1.5e-1684.75Show/hide
Query:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        Q   +HFQKLRIENAMGSSAPTAKQ     ISYLRNLGCTITPTSRLHASSLIEQYKSL
Subjt:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
A0A6J1H0C8 DNA helicase2.9e-1581.36Show/hide
Query:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        Q   +HF KLRIENAMGSSAP+AKQ     ISYLRNLGCTITPTSRLHASSLIEQYKSL
Subjt:  QALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
SwissProt top hitse value%identityAlignment
D1KF50 ATP-dependent DNA helicase SRS2-like protein At4g251202.0e-1367.27Show/hide
Query:  DHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        +HFQKLRIEN+MG+S  T+KQ+A     +L +LGCT+ PTSRLHAS LIEQYKSL
Subjt:  DHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
Arabidopsis top hitse value%identityAlignment
AT4G25120.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.4e-1467.27Show/hide
Query:  DHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL
        +HFQKLRIEN+MG+S  T+KQ+A     +L +LGCT+ PTSRLHAS LIEQYKSL
Subjt:  DHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTGAACTCACACATGAGCAGGCGTTGACAGATCATTTCCAGAAATTAAGAATTGAAAATGCAATGGGCTCCTCAGCACCTACCGCAAAACAGGTAGCTACGAT
TTATATTTCTTATTTGCGCAATTTGGGATGTACTATTACCCCAACATCACGCCTCCATGCTTCGTCCTTGATTGAGCAATATAAATCACTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTGAACTCACACATGAGCAGGCGTTGACAGATCATTTCCAGAAATTAAGAATTGAAAATGCAATGGGCTCCTCAGCACCTACCGCAAAACAGGTAGCTACGAT
TTATATTTCTTATTTGCGCAATTTGGGATGTACTATTACCCCAACATCACGCCTCCATGCTTCGTCCTTGATTGAGCAATATAAATCACTATAACTACTTGCAAGAAATA
TACCCACAGGCCTTTGATGGTAGTTTGTAAATTTCGACCATAATGGAGCCAGAAGGATGGCTATTAGATTTTGCATTTTCTTTTTAAATAATTTATCTTCAGGCTAATTG
TTTATTTTATGCAATGTAACCAATATTTGTTTTTTTAAAAAGTTACAGCTTTAAATGTATTATTTTAAGTTTGTTTCTTA
Protein sequenceShow/hide protein sequence
MKSELTHEQALTDHFQKLRIENAMGSSAPTAKQVATIYISYLRNLGCTITPTSRLHASSLIEQYKSL