; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G005180 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G005180
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
Genome locationCiama_Chr01:5444086..5448090
RNA-Seq ExpressionCaUC01G005180
SyntenyCaUC01G005180
Gene Ontology termsNA
InterPro domainsIPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055104.1 uncharacterized protein E6C27_scaffold231G00300 [Cucumis melo var. makuwa]8.4e-3464.52Show/hide
Query:  AAPRFLLSSSPSP-TFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDTSAGGKE-
        AAPR  L  S SP  F   ++          GFR SHWS YEKN E+ IWPT+VP+ VIH NLS+NYW PHP+TGVFGPP AHH+S+ L NDTSAGG E 
Subjt:  AAPRFLLSSSPSP-TFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDTSAGGKE-

Query:  DSVLDLKAWFRHNALEDLEKPHSL
         SVL+LKAWFRHN LEDLEKPHSL
Subjt:  DSVLDLKAWFRHNALEDLEKPHSL

KAE8647930.1 hypothetical protein Csa_000491 [Cucumis sativus]6.4e-3474.73Show/hide
Query:  FRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDTSAGGKEDSVLDLKAWFRHNALEDLEKPHSL
        FR+SHWS YEKN E+QIWPT+VP+H+I  +LSE+YW PHP+TGVFGPP AHHNS+ + NDTSAGG E SVL+LKAWFRHN LEDLEKPH+L
Subjt:  FRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDTSAGGKEDSVLDLKAWFRHNALEDLEKPHSL

XP_004143665.1 late embryogenesis abundant protein At5g17165 [Cucumis sativus]3.4e-3560.77Show/hide
Query:  MAARWKIIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDT
        MA   KII A     +++ SP   L     Y       GFR+SHWS YEKN E+QIWPT+VP+H+I  +LSE+YW PHP+TGVFGPP AHHNS+ + NDT
Subjt:  MAARWKIIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDT

Query:  SAGGKEDSVLDLKAWFRHNALEDLEKPHSL
        SAGG E SVL+LKAWFRHN LEDLEKPH+L
Subjt:  SAGGKEDSVLDLKAWFRHNALEDLEKPHSL

XP_016903720.1 PREDICTED: uncharacterized protein LOC103504694 [Cucumis melo]9.0e-3665.85Show/hide
Query:  AAPRFLLSSSPSP-TFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDTSAGGKED
        AAPR  L  S SP  F   ++          GFR SHWS YEKN E+ IWPT+VP+ VIH NLS+NYW PHP+TGVFGPP AHHNS+ L NDTSAGG E 
Subjt:  AAPRFLLSSSPSP-TFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDTSAGGKED

Query:  SVLDLKAWFRHNALEDLEKPHSL
        SVL+LKAWFRHN LEDLEKPHSL
Subjt:  SVLDLKAWFRHNALEDLEKPHSL

XP_038875585.1 late embryogenesis abundant protein At5g17165-like [Benincasa hispida]1.1e-4170.31Show/hide
Query:  MAARWK-IIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-ND
        MA+ W+ IIA+PRFLLSS PS    L  +  +  A   +  R SHWS YEKN EEQIWPTVVPDHVIH N+SENYWAPHP+TGVFGPPIAH +++A+ ND
Subjt:  MAARWK-IIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-ND

Query:  TSAGGKEDSVLDLKAWFRHNALEDLEKP
        TSAGGKEDSVLD+KAWFRHN LEDLEKP
Subjt:  TSAGGKEDSVLDLKAWFRHNALEDLEKP

TrEMBL top hitse value%identityAlignment
A0A0A0KRJ5 Uncharacterized protein1.6e-3560.77Show/hide
Query:  MAARWKIIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDT
        MA   KII A     +++ SP   L     Y       GFR+SHWS YEKN E+QIWPT+VP+H+I  +LSE+YW PHP+TGVFGPP AHHNS+ + NDT
Subjt:  MAARWKIIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDT

Query:  SAGGKEDSVLDLKAWFRHNALEDLEKPHSL
        SAGG E SVL+LKAWFRHN LEDLEKPH+L
Subjt:  SAGGKEDSVLDLKAWFRHNALEDLEKPHSL

A0A1S4E6U6 uncharacterized protein LOC1035046944.3e-3665.85Show/hide
Query:  AAPRFLLSSSPSP-TFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDTSAGGKED
        AAPR  L  S SP  F   ++          GFR SHWS YEKN E+ IWPT+VP+ VIH NLS+NYW PHP+TGVFGPP AHHNS+ L NDTSAGG E 
Subjt:  AAPRFLLSSSPSP-TFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDTSAGGKED

Query:  SVLDLKAWFRHNALEDLEKPHSL
        SVL+LKAWFRHN LEDLEKPHSL
Subjt:  SVLDLKAWFRHNALEDLEKPHSL

A0A5A7UIY1 Uncharacterized protein4.1e-3464.52Show/hide
Query:  AAPRFLLSSSPSP-TFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDTSAGGKE-
        AAPR  L  S SP  F   ++          GFR SHWS YEKN E+ IWPT+VP+ VIH NLS+NYW PHP+TGVFGPP AHH+S+ L NDTSAGG E 
Subjt:  AAPRFLLSSSPSP-TFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAAL-NDTSAGGKE-

Query:  DSVLDLKAWFRHNALEDLEKPHSL
         SVL+LKAWFRHN LEDLEKPHSL
Subjt:  DSVLDLKAWFRHNALEDLEKPHSL

A0A6J1H0D3 late embryogenesis abundant protein At5g17165-like2.9e-2456.56Show/hide
Query:  MAARWKIIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTS
        MAA   +I A R  L+   +P  RL  +       LF   R  HWS YEKN EE++ PTVVPDH+IH +LSE+YWAPHP+TGVFGPPI  HN    +DTS
Subjt:  MAARWKIIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTS

Query:  AGG-KEDSVLDLKAWFRHNALE
        AGG KE SVL+LK WFRH  LE
Subjt:  AGG-KEDSVLDLKAWFRHNALE

A0A6J1K564 late embryogenesis abundant protein At5g17165-like5.7e-2856.92Show/hide
Query:  MAARWKIIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTS
        MAA   +I A R  L+   +P  RL  +       LF   R  HWS YEKN EE++ PTVVPDH+IH ++SE+YWAPHP+TGVFGPPI+ HN    +DTS
Subjt:  MAARWKIIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTS

Query:  AGG-KEDSVLDLKAWFRHNALEDLEKPHSL
        AGG KE SVL+LK WFRH  LED EKPH L
Subjt:  AGG-KEDSVLDLKAWFRHNALEDLEKPHSL

SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171652.1e-1951.72Show/hide
Query:  RTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTSAGGKEDSVLDLKAWFRHNALEDLEKPH
        R  H S Y+KN+EE++ P+ VPD +I P+ S+ YW+PHP+TGVFGP  +  N+    D   GG+EDSV++ KAWFR  +LEDL+K H
Subjt:  RTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTSAGGKEDSVLDLKAWFRHNALEDLEKPH

Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein4.0e-1840Show/hide
Query:  LLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTSAGGKED-SVLDLK
        L++S        R++     + LF   R+ H S Y+KN+E+++  + VPD VI P+ S+ YW+PHPKTGVFGP    H++     T+ G  +D +VL+  
Subjt:  LLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTSAGGKED-SVLDLK

Query:  AWFRHNALEDLEKPH
        AWFR  +LED +K H
Subjt:  AWFRHNALEDLEKPH

AT5G17165.1 unknown protein1.5e-2051.72Show/hide
Query:  RTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTSAGGKEDSVLDLKAWFRHNALEDLEKPH
        R  H S Y+KN+EE++ P+ VPD +I P+ S+ YW+PHP+TGVFGP  +  N+    D   GG+EDSV++ KAWFR  +LEDL+K H
Subjt:  RTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTSAGGKEDSVLDLKAWFRHNALEDLEKPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCAGATGGAAGATTATTGCTGCTCCACGATTCTTACTTTCGTCGTCCCCCTCTCCTACTTTCCGCCTCCGGTCAACTGATAACTACAACCAAGCTCGTTTGTT
TGTTGGTTTTAGGACAAGTCATTGGTCAACATATGAGAAGAACCTAGAGGAGCAAATATGGCCCACGGTGGTACCGGACCATGTGATCCATCCTAATCTATCTGAAAACT
ATTGGGCCCCACATCCTAAAACGGGAGTTTTTGGGCCACCAATAGCCCACCATAATTCTGCAGCTCTGAACGATACGTCGGCTGGTGGTAAGGAGGATTCAGTTCTAGAC
CTCAAGGCTTGGTTCCGACATAACGCCCTCGAAGATCTTGAGAAACCACACTCTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATATAGTTCCATTAATATTGAGTTATTTATGCATGGCCGCCAGATGGAAGATTATTGCTGCTCCACGATTCTTACTTTCGTCGTCCCCCTCTCCTACTTTCCGCCTCCGG
TCAACTGATAACTACAACCAAGCTCGTTTGTTTGTTGGTTTTAGGACAAGTCATTGGTCAACATATGAGAAGAACCTAGAGGAGCAAATATGGCCCACGGTGGTACCGGA
CCATGTGATCCATCCTAATCTATCTGAAAACTATTGGGCCCCACATCCTAAAACGGGAGTTTTTGGGCCACCAATAGCCCACCATAATTCTGCAGCTCTGAACGATACGT
CGGCTGGTGGTAAGGAGGATTCAGTTCTAGACCTCAAGGCTTGGTTCCGACATAACGCCCTCGAAGATCTTGAGAAACCACACTCTCTCTAA
Protein sequenceShow/hide protein sequence
MAARWKIIAAPRFLLSSSPSPTFRLRSTDNYNQARLFVGFRTSHWSTYEKNLEEQIWPTVVPDHVIHPNLSENYWAPHPKTGVFGPPIAHHNSAALNDTSAGGKEDSVLD
LKAWFRHNALEDLEKPHSL