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CaUC01G005240 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G005240
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptioncell division cycle 20.2, cofactor of APC complex-like
Genome locationCiama_Chr01:5532806..5534007
RNA-Seq ExpressionCaUC01G005240
SyntenyCaUC01G005240
Gene Ontology termsGO:0051301 - cell division (biological process)
GO:1904668 - positive regulation of ubiquitin protein ligase activity (biological process)
GO:1905786 - positive regulation of anaphase-promoting complex-dependent catabolic process (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0010997 - anaphase-promoting complex binding (molecular function)
GO:1990757 - ubiquitin ligase activator activity (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR033010 - The WD repeat Cdc20/Fizzy family
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042609.1 cell division cycle 20.2, cofactor of APC complex-like [Cucumis melo var. makuwa]5.8e-1775.41Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH
        MVK+GELTGHTS VLFMAQSPDGCTVA A  D+TLRLW VFG PEVAK TPKSY+     H
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH

XP_004145892.1 cell division cycle 20.2, cofactor of APC complex [Cucumis sativus]6.9e-1877.05Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH
        MVK+GELTGHTS VLFMAQSPDGCTVA A  D+TLRLWHVFG PEVAK TPKSY+     H
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH

XP_008437508.1 PREDICTED: cell division cycle 20.2, cofactor of APC complex-like [Cucumis melo]5.8e-1775.41Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH
        MVK+GELTGHTS VLFMAQSPDGCTVA A  D+TLRLW VFG PEVAK TPKSY+     H
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH

XP_038875176.1 cell division cycle 20.2, cofactor of APC complex-like [Benincasa hispida]2.6e-1775.41Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH
        MVK+GELTGHTS VLFMAQSPDGCTVA A  D+TLRLWHVFG PEVAK  PKSY+     H
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH

XP_038906808.1 cell division cycle 20.2, cofactor of APC complex-like [Benincasa hispida]9.0e-1875.41Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH
        MVK+GELTGHTS VLFMAQSPDGCTVA A  D+TLRLWH+FG PEVAK TPKSY+     H
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH

TrEMBL top hitse value%identityAlignment
A0A0A0KK33 Cell division cycle3.3e-1877.05Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH
        MVK+GELTGHTS VLFMAQSPDGCTVA A  D+TLRLWHVFG PEVAK TPKSY+     H
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH

A0A1S3AU74 cell division cycle 20.2, cofactor of APC complex-like2.8e-1775.41Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH
        MVK+GELTGHTS VLFMAQSPDGCTVA A  D+TLRLW VFG PEVAK TPKSY+     H
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH

A0A5A7TMM3 Cell division cycle 20.2, cofactor of APC complex-like2.8e-1775.41Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH
        MVK+GELTGHTS VLFMAQSPDGCTVA A  D+TLRLW VFG PEVAK TPKSY+     H
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH

A0A6J1JY99 cell division cycle 20.2, cofactor of APC complex-like6.9e-1672.13Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH
        MVK+GELTGHTS VLFMAQSPDGCTVA A  D+TLR W+VFG PEVAK   KSY+A    H
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHH

A0A6J1K818 cell division cycle 20.2, cofactor of APC complex-like4.1e-1679.25Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKS
        MVK+GELTGHTS VL+MAQSPDGCTVA A  D+TLR WH FGTPEVAK+ PKS
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKS

SwissProt top hitse value%identityAlignment
F4K5R6 Cell division cycle 20.6, cofactor of APC complex2.4e-1369.09Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS
        MVK+ EL GHTS VLFMAQSPDGCTVA A  D+TLRLW+VFG P   K+T K+ S
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS

Q3E906 Cell division cycle 20.5, cofactor of APC complex2.4e-1369.09Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS
        MVK+ EL GHTS VLFMAQSPDGCTVA A  D+TLRLW+VFG P   K+T K+ S
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS

Q9S7H3 Cell division cycle 20.3, cofactor of APC complex1.7e-1163.64Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS
        M K+ EL GHTS VLFMAQSP+GCTVA A  D+ LRLW+VFG P   K+T K+ S
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS

Q9S7I8 Cell division cycle 20.2, cofactor of APC complex1.3e-1470.37Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVA-KSTPKS
        MVK+ ELTGHTS VL+MAQSPDGCTVA A  D+TLR W+VFG PE A K+ PK+
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVA-KSTPKS

Q9SZA4 Cell division cycle 20.1, cofactor of APC complex5.6e-1569.64Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVA-KSTPKSYS
        MVK+ ELTGHTS VL+MAQSPDGCTVA A  D+TLR W+VFG PE A K+ PK+ S
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVA-KSTPKSYS

Arabidopsis top hitse value%identityAlignment
AT4G33260.1 Transducin family protein / WD-40 repeat family protein8.9e-1670.37Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVA-KSTPKS
        MVK+ ELTGHTS VL+MAQSPDGCTVA A  D+TLR W+VFG PE A K+ PK+
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVA-KSTPKS

AT4G33270.1 Transducin family protein / WD-40 repeat family protein4.0e-1669.64Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVA-KSTPKSYS
        MVK+ ELTGHTS VL+MAQSPDGCTVA A  D+TLR W+VFG PE A K+ PK+ S
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVA-KSTPKSYS

AT5G27080.1 Transducin family protein / WD-40 repeat family protein1.2e-1263.64Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS
        M K+ EL GHTS VLFMAQSP+GCTVA A  D+ LRLW+VFG P   K+T K+ S
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS

AT5G27570.1 Transducin/WD40 repeat-like superfamily protein1.7e-1469.09Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS
        MVK+ EL GHTS VLFMAQSPDGCTVA A  D+TLRLW+VFG P   K+T K+ S
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS

AT5G27945.1 Transducin/WD40 repeat-like superfamily protein1.7e-1469.09Show/hide
Query:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS
        MVK+ EL GHTS VLFMAQSPDGCTVA A  D+TLRLW+VFG P   K+T K+ S
Subjt:  MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGCTGGGAGAGCTCACCGGTCATACATCAACAGTTCTCTTCATGGCTCAGAGTCCAGATGGGTGCACTGTGGCTGAAGCAACAACAGATGACACATTGAGATT
GTGGCATGTTTTTGGAACTCCCGAAGTGGCTAAATCTACTCCAAAATCCTACAGTGCATTCAACCTTCATCACCAGCAACCACCTCCGACGCCCAACTCCGACGATCACC
TCCAAAACAAACTTCGACGACCACCTCCAATAGCAAACTTCAATGACCACCTCTACATCCAACCACCACTGTTGATGCCCAACTCTGACGACCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGCTGGGAGAGCTCACCGGTCATACATCAACAGTTCTCTTCATGGCTCAGAGTCCAGATGGGTGCACTGTGGCTGAAGCAACAACAGATGACACATTGAGATT
GTGGCATGTTTTTGGAACTCCCGAAGTGGCTAAATCTACTCCAAAATCCTACAGTGCATTCAACCTTCATCACCAGCAACCACCTCCGACGCCCAACTCCGACGATCACC
TCCAAAACAAACTTCGACGACCACCTCCAATAGCAAACTTCAATGACCACCTCTACATCCAACCACCACTGTTGATGCCCAACTCTGACGACCTCTGA
Protein sequenceShow/hide protein sequence
MVKLGELTGHTSTVLFMAQSPDGCTVAEATTDDTLRLWHVFGTPEVAKSTPKSYSAFNLHHQQPPPTPNSDDHLQNKLRRPPPIANFNDHLYIQPPLLMPNSDDL