CuGenDBv2

Gene ID	CaUC01G005560
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Mannan endo-1,4-beta-mannosidase
Genome location	Ciama_Chr01:5851819..5854390
RNA-Seq Expression	CaUC01G005560
Synteny	CaUC01G005560
Gene Ontology terms	GO:0071704 - organic substance metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domains	IPR017853 - Glycoside hydrolase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0054031.1 endoglucanase-like [Cucumis melo var. makuwa]

6.6e-84

92.64

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Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG
        WIVDATTGQRVKLMCVNWPGHMQ MLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFD+K+ + GIAQNNPSILNMTLV+AYG
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG

Query:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        AVVDSLAAH +MVVSDNHISQPRWCCD+NDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQ++
Subjt:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

KAA0055142.1 endoglucanase-like [Cucumis melo var. makuwa]

6.6e-84

92.64

Show/hide

Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG
        WIVDATTGQRVKLMCVNWPGHMQ MLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFD+K+ + GIAQNNPSILNMTLV+AYG
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG

Query:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        AVVDSLAAH +MVVSDNHISQPRWCCD+NDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQ++
Subjt:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

KAA0055143.1 endoglucanase-like [Cucumis melo var. makuwa]

6.6e-84

92.64

Show/hide

Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG
        WIVDATTGQRVKLMCVNWPGHMQ MLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFD+K+ + GIAQNNPSILNMTLV+AYG
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG

Query:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        AVVDSLAAH +MVVSDNHISQPRWCCD+NDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQ++
Subjt:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

TYK00315.1 endoglucanase-like [Cucumis melo var. makuwa]

5.6e-83

90.8

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Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG
        WIVDATTGQRVKLMCVNWPGHMQ MLAEGLHLRPLNDIAALV KLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKD + GIAQNNPSILN+TLV+AY 
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG

Query:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
         V+DSLA HG+MVVSDNHISQPRWCCD+NDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQ++
Subjt:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

TYK20717.1 endoglucanase-like [Cucumis melo var. makuwa]

1.9e-83

92.02

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Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG
        WIVDATTGQRVKLMCVNWPGHMQ MLAEGLHLRPLNDIAALV KLRFNCVRLTYSIHMFTRHANLTVQQSFENFD+K+ + GIAQNNPSILNMTLV+AYG
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG

Query:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        AVVDSLAAH +MVVSDNHISQPRWCCD+NDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQ++
Subjt:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UGS0 Mannan endo-1,4-beta-mannosidase

3.2e-84

92.64

Show/hide

Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG
        WIVDATTGQRVKLMCVNWPGHMQ MLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFD+K+ + GIAQNNPSILNMTLV+AYG
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG

Query:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        AVVDSLAAH +MVVSDNHISQPRWCCD+NDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQ++
Subjt:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

A0A5A7UH31 Mannan endo-1,4-beta-mannosidase

3.2e-84

92.64

Show/hide

Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG
        WIVDATTGQRVKLMCVNWPGHMQ MLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFD+K+ + GIAQNNPSILNMTLV+AYG
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG

Query:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        AVVDSLAAH +MVVSDNHISQPRWCCD+NDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQ++
Subjt:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

A0A5A7UKF5 Mannan endo-1,4-beta-mannosidase

3.2e-84

92.64

Show/hide

Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG
        WIVDATTGQRVKLMCVNWPGHMQ MLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFD+K+ + GIAQNNPSILNMTLV+AYG
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG

Query:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        AVVDSLAAH +MVVSDNHISQPRWCCD+NDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQ++
Subjt:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

A0A5D3BML8 Mannan endo-1,4-beta-mannosidase

2.7e-83

90.8

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Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG
        WIVDATTGQRVKLMCVNWPGHMQ MLAEGLHLRPLNDIAALV KLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKD + GIAQNNPSILN+TLV+AY 
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG

Query:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
         V+DSLA HG+MVVSDNHISQPRWCCD+NDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQ++
Subjt:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

A0A5D3DAU2 Mannan endo-1,4-beta-mannosidase

9.3e-84

92.02

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Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG
        WIVDATTGQRVKLMCVNWPGHMQ MLAEGLHLRPLNDIAALV KLRFNCVRLTYSIHMFTRHANLTVQQSFENFD+K+ + GIAQNNPSILNMTLV+AYG
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYG

Query:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        AVVDSLAAH +MVVSDNHISQPRWCCD+NDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQ++
Subjt:  AVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

SwissProt top hits

e value

%identity

Alignment

C0HLA0 Glycosyl hydrolase 5 family protein

1.8e-44

53.55

Show/hide

Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTR--HANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEA
        WIVD  TG RVKL CVNW GH++  L EGL+  P+  +A  ++ L FNCVRLTYSIHM TR  + N TV Q+F   ++ +A +GI  NNP +L++  V A
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTR--HANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEA

Query:  YGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAA
        Y  VV +L+  GVMV+ DNH+S+P+WCC  +DGNGFFGDRYF+P  W++G+ L A
Subjt:  YGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAA

Arabidopsis top hits

e value

%identity

Alignment

AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein

4.3e-41

43.98

Show/hide

Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHA---NLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVE
        WIVD   G RVKL+C NWP H+Q ++AEGL  +P++ +A  + ++ FNCVRLT+ + + T      N+TV+QSF++  + D + G   NNPSI+++ L+E
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHA---NLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVE

Query:  AYGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        AY  VV +L  + VMV+ DNH+++P WCC ++DGNGFFGD++FDP  W+  +   A +    S ++
Subjt:  AYGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

AT3G26130.1 Cellulase (glycosyl hydrolase family 5) protein

1.9e-41

47.56

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Query:  WIV-DATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRH---ANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLV
        WIV D   G+RVKL CVNWP H++  +AEGL  +PL+ IA  +  + FNCVRLT+ +++ T     A +TV+QS   F + +A++G   +NP+IL++ L+
Subjt:  WIV-DATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRH---ANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLV

Query:  EAYGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKS
        +A+  VV  L  H VMV+ DNHISQP WCC DNDGNGFFGD++ +PQ W++G+   A    + S
Subjt:  EAYGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKS

AT3G26140.1 Cellulase (glycosyl hydrolase family 5) protein

3.3e-41

43.98

Show/hide

Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHA---NLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVE
        WI+D   GQRVKL CVNWP H+Q ++AEGL  + ++D+A  +  + FNCVR T+ + + T      N+TV+QSF++  + D ++G    NPS++++ L+E
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHA---NLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVE

Query:  AYGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        AY  VV  L  + VMV+ DNH+++P WCC  NDGNGFFGD +FDP  W+ G++  A + K  + ++
Subjt:  AYGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

AT5G16700.1 Glycosyl hydrolase superfamily protein

1.4e-36

42.77

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Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHA---NLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVE
        WIVD   GQRVKL CVNWP H+Q  +AEGL  +PL+ I+  +  + FNCVRLT+ + + T       +TV+QSFE+  + + + GI  +NP +L++ L  
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHA---NLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVE

Query:  AYGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL
        A+  VV +L  +GVMV+ DNH++ P WCC DND + FFG  +FDP  W +G+   A   ++ + ++
Subjt:  AYGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

AT5G17500.1 Glycosyl hydrolase superfamily protein

6.7e-34

42.95

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Query:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMF---TRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVE
        WIV+   G RVKL C NWP H++ ++AEGL  +P++ I+  +  + FNCVRLT+ + +    T   N+TV+QSFE + +   + GI  +NP I+N  L+ 
Subjt:  WIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMF---TRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVE

Query:  AYGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAA
         + AVV SL  H VMV+ DNH + P WCC ++D + FFGD  F+P  W+ G+   A
Subjt:  AYGAVVDSLAAHGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATATGGATCGTCGATGCCACAACAGGCCAACGTGTGAAGTTAATGTGCGTAAATTGGCCTGGGCACATGCAAGCTATGTTGGCAGAGGGTCTTCATCTCAGGCCGCT
TAATGATATCGCTGCCTTAGTAGCGAAGTTGCGCTTCAATTGTGTGCGTTTGACATACTCAATTCACATGTTCACACGCCATGCCAATTTGACTGTTCAACAATCCTTTG
AGAATTTTGATATGAAGGATGCCATGACAGGTATAGCTCAAAACAATCCTTCTATATTGAACATGACACTCGTTGAGGCATACGGAGCAGTGGTTGATTCACTTGCTGCA
CATGGGGTTATGGTAGTTTCTGATAATCATATAAGTCAGCCAAGATGGTGTTGTGACGATAATGATGGGAATGGCTTCTTTGGAGATCGGTATTTCGATCCACAAGAATG
GCTACAAGGAATCAGTTTGGCAGCACAAAGCCTAAAAAGCAAATCACAAATTCTGTAA

mRNA sequence

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Protein sequence

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MIWIVDATTGQRVKLMCVNWPGHMQAMLAEGLHLRPLNDIAALVAKLRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDAMTGIAQNNPSILNMTLVEAYGAVVDSLAA
HGVMVVSDNHISQPRWCCDDNDGNGFFGDRYFDPQEWLQGISLAAQSLKSKSQIL

CaUC01G005560 (gene) of Watermelon (USVL246-FR2) v1 genome