CuGenDBv2

Gene ID	CaUC01G005580
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Mannan endo-1,4-beta-mannosidase
Genome location	Ciama_Chr01:5855389..5855838
RNA-Seq Expression	CaUC01G005580
Synteny	CaUC01G005580
Gene Ontology terms	GO:0071704 - organic substance metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domains	IPR035992 - Ricin B-like lectins

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0054031.1 endoglucanase-like [Cucumis melo var. makuwa]

4.2e-69

88.11

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Query:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL
        DPSSNL TSFIMYHPLSGGCVRMNKKYQL ISSCKTSNRW HE D API+LTGSILCLKAIG GLPPILS+DCSSQQSIWKY SNAKLQLAT+D QG+ L
Subjt:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL

Query:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI
        CLQRASH+HQIVTNKC+CSNDSQCQEDPQSQWFTLVPSN+R I
Subjt:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

KAA0055143.1 endoglucanase-like [Cucumis melo var. makuwa]

3.2e-69

88.11

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Query:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL
        DPSSNLTTSFIMYHPLSGGCVRMNKKYQL ISSCKTSNRW HE D API+L GSILCLKAIG GLPPILS+DCSSQQSIWKY SNAKLQLAT+D QG+ L
Subjt:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL

Query:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI
        CLQRASH+HQIVTNKC+CSNDSQCQEDPQSQWFTLVPSN+R I
Subjt:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

TYK11103.1 endoglucanase-like [Cucumis melo var. makuwa]

4.2e-69

87.41

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Query:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL
        DPSSN TTSFIMYHPLSGGC+RMNKKYQL ISSCKTSNRW HE D API+L GSILCLKAIG GLPPILS+DCSSQQSIWKY SNAKLQLAT+D QG+ L
Subjt:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL

Query:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI
        CLQRASH+HQIVTNKC+CSNDSQCQEDPQSQWFTLVPSN+RLI
Subjt:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

TYK20717.1 endoglucanase-like [Cucumis melo var. makuwa]

4.2e-69

88.11

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Query:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL
        DPSSNL TSFIMYHPLSGGCVRMNKKYQL ISSCKTSNRW HE D API+LTGSILCLKAIG GLPPILS+DCSSQQSIWKY SNAKLQLAT+D QG+ L
Subjt:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL

Query:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI
        CLQRASH+HQIVTNKC+CSNDSQCQEDPQSQWFTLVPSN+R I
Subjt:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

XP_008459280.1 PREDICTED: uncharacterized protein LOC103498458 [Cucumis melo]

1.1e-69

87.5

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Query:  TDPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGET
        TDPSSN TTSFIMYHPLSGGC+RMNKKYQL ISSCKTSNRW HE D API+L GSILCLKAIG GLPPILS+DCSSQQSIWKY SNAKLQLAT+D QG+ 
Subjt:  TDPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGET

Query:  LCLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI
        LCLQRASH+HQIVTNKC+CSNDSQCQEDPQSQWFTLVPSN+RLI
Subjt:  LCLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C9U1 Mannan endo-1,4-beta-mannosidase

5.3e-70

87.5

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Query:  TDPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGET
        TDPSSN TTSFIMYHPLSGGC+RMNKKYQL ISSCKTSNRW HE D API+L GSILCLKAIG GLPPILS+DCSSQQSIWKY SNAKLQLAT+D QG+ 
Subjt:  TDPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGET

Query:  LCLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI
        LCLQRASH+HQIVTNKC+CSNDSQCQEDPQSQWFTLVPSN+RLI
Subjt:  LCLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

A0A5A7UGS0 Mannan endo-1,4-beta-mannosidase

1.5e-69

88.11

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Query:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL
        DPSSNLTTSFIMYHPLSGGCVRMNKKYQL ISSCKTSNRW HE D API+L GSILCLKAIG GLPPILS+DCSSQQSIWKY SNAKLQLAT+D QG+ L
Subjt:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL

Query:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI
        CLQRASH+HQIVTNKC+CSNDSQCQEDPQSQWFTLVPSN+R I
Subjt:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

A0A5A7UKF5 Mannan endo-1,4-beta-mannosidase

2.0e-69

88.11

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Query:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL
        DPSSNL TSFIMYHPLSGGCVRMNKKYQL ISSCKTSNRW HE D API+LTGSILCLKAIG GLPPILS+DCSSQQSIWKY SNAKLQLAT+D QG+ L
Subjt:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL

Query:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI
        CLQRASH+HQIVTNKC+CSNDSQCQEDPQSQWFTLVPSN+R I
Subjt:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

A0A5D3CGT4 Mannan endo-1,4-beta-mannosidase

2.0e-69

87.41

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Query:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL
        DPSSN TTSFIMYHPLSGGC+RMNKKYQL ISSCKTSNRW HE D API+L GSILCLKAIG GLPPILS+DCSSQQSIWKY SNAKLQLAT+D QG+ L
Subjt:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL

Query:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI
        CLQRASH+HQIVTNKC+CSNDSQCQEDPQSQWFTLVPSN+RLI
Subjt:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

A0A5D3DAU2 Mannan endo-1,4-beta-mannosidase

2.0e-69

88.11

Show/hide

Query:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL
        DPSSNL TSFIMYHPLSGGCVRMNKKYQL ISSCKTSNRW HE D API+LTGSILCLKAIG GLPPILS+DCSSQQSIWKY SNAKLQLAT+D QG+ L
Subjt:  DPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETL

Query:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI
        CLQRASH+HQIVTNKC+CSNDSQCQEDPQSQWFTLVPSN+R I
Subjt:  CLQRASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

SwissProt top hits

e value

%identity

Alignment

C0HLA0 Glycosyl hydrolase 5 family protein

1.7e-17

35.92

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Query:  IMYHPLSGGCVRMNKKYQLVISSCKT-SNRWRHEDD-SAPIRLTGSILCLKAIGNGLPPILSRDCSS-QQSIWKYASNAKLQLAT----IDHQGETLCLQ
        I+YHP SG CV       + + SC++  +RW ++     PI L GS  C+   GNGLP I++ +CS+   ++W   S+A+LQL T     D + + +CL 
Subjt:  IMYHPLSGGCVRMNKKYQLVISSCKT-SNRWRHEDD-SAPIRLTGSILCLKAIGNGLPPILSRDCSS-QQSIWKYASNAKLQLAT----IDHQGETLCLQ

Query:  RASHTHQIVTNKCMCSNDSQC--QEDPQSQWFTLVPSNVRLI
          S +  I TN+C+C  DS C  + +P+ QWF ++ +N +L+
Subjt:  RASHTHQIVTNKCMCSNDSQC--QEDPQSQWFTLVPSNVRLI

Arabidopsis top hits

e value

%identity

Alignment

AT3G26130.1 Cellulase (glycosyl hydrolase family 5) protein

3.9e-17

39.1

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Query:  IMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCS-SQQSIWKYASNAKLQLATIDHQGETLCLQRASHTH
        IM+HP +G C+     +QL + SC  S  WR             ILCLKA   G    L    S S  S WK  S++K+QL++I   G ++CL   +  +
Subjt:  IMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCS-SQQSIWKYASNAKLQLATIDHQGETLCLQRASHTH

Query:  QIVTNKCMC-SNDSQCQEDPQSQWFTLVPSNVR
         IVTN C C   +S C  DP+SQWF LV S  R
Subjt:  QIVTNKCMC-SNDSQCQEDPQSQWFTLVPSNVR

Sequences

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CDS sequence

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ATGGTTGCTCTTGACACAGATCCAAGTTCAAATCTCACAACATCGTTCATAATGTACCATCCTCTTAGTGGTGGATGTGTGCGAATGAACAAAAAATATCAATTAGTAAT
TAGCAGCTGTAAGACTTCTAATCGCTGGAGGCATGAAGACGACAGTGCTCCTATCAGGTTGACAGGATCTATATTGTGTTTGAAAGCTATAGGAAATGGGCTCCCCCCAA
TTCTCTCTCGAGATTGCTCAAGCCAACAAAGTATTTGGAAATATGCTTCAAATGCGAAGCTACAACTAGCCACCATAGATCACCAAGGAGAAACCCTATGCTTGCAAAGA
GCTTCTCATACCCATCAAATTGTGACTAATAAGTGCATGTGTTCGAATGATTCTCAATGTCAAGAAGATCCACAAAGCCAATGGTTTACGCTTGTTCCATCAAATGTACG
TCTCATTTAA

mRNA sequence

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Protein sequence

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MVALDTDPSSNLTTSFIMYHPLSGGCVRMNKKYQLVISSCKTSNRWRHEDDSAPIRLTGSILCLKAIGNGLPPILSRDCSSQQSIWKYASNAKLQLATIDHQGETLCLQR
ASHTHQIVTNKCMCSNDSQCQEDPQSQWFTLVPSNVRLI

CaUC01G005580 (gene) of Watermelon (USVL246-FR2) v1 genome