; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G006060 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G006060
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionProtein IDA-like
Genome locationCiama_Chr01:6559628..6559948
RNA-Seq ExpressionCaUC01G006060
SyntenyCaUC01G006060
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034518.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]7.7e-0948.39Show/hide
Query:  SHSSLLSPPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        S SS  S  S     ++  + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  SHSSLLSPPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN

KAG6579701.1 hypothetical protein SDJN03_24149, partial [Cucurbita argyrosperma subsp. sororia]6.3e-1157.95Show/hide
Query:  SLPMAS------SNAFLLLLLLLIPLAFTSAARPFPAT---TTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVD
        SLPMA+      SNA LL   LL  L   S+ARP PAT   T+  P P+      TAFR  HQ+FSFLPKG PIPPSAPSKRHNS+VD
Subjt:  SLPMAS------SNAFLLLLLLLIPLAFTSAARPFPAT---TTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVD

KGN51548.1 hypothetical protein Csa_008377 [Cucumis sativus]5.9e-1770.37Show/hide
Query:  MASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        MASS+ F +LLL+L PL   + ARPFPA TT+  P SHNT  TTAFR  HQIFSFLPKG PIPPSAPSKRHNSL++SAP N
Subjt:  MASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN

KGN52035.1 hypothetical protein Csa_008746 [Cucumis sativus]2.6e-0951.16Show/hide
Query:  PPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        P S    S   F+LLLLLL+    +SA RP          P  +    TAFR+G Q FSFLPKG PIPPS PS RHNS+VDS P N
Subjt:  PPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN

TYK09072.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]7.7e-0948.39Show/hide
Query:  SHSSLLSPPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        S SS  S  S     ++  + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  SHSSLLSPPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN

TrEMBL top hitse value%identityAlignment
A0A059BFA1 Uncharacterized protein2.4e-0854.88Show/hide
Query:  AFLLLLLLLIPLAFTSAARPFPATTTIMPP---PSH---NTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        AF LLLLLL      +AARP P TTT M P   P H   + P  TAFRH   IFS+LPKG  +PPS PS RHNS ++S P N
Subjt:  AFLLLLLLLIPLAFTSAARPFPATTTIMPP---PSH---NTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN

A0A0A0KPP8 Uncharacterized protein2.8e-1770.37Show/hide
Query:  MASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        MASS+ F +LLL+L PL   + ARPFPA TT+  P SHNT  TTAFR  HQIFSFLPKG PIPPSAPSKRHNSL++SAP N
Subjt:  MASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN

A0A0A0KR07 Uncharacterized protein1.3e-0951.16Show/hide
Query:  PPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        P S    S   F+LLLLLL+    +SA RP          P  +    TAFR+G Q FSFLPKG PIPPS PS RHNS+VDS P N
Subjt:  PPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN

A0A5A7SV51 Putative Membrane lipoprotein3.7e-0948.39Show/hide
Query:  SHSSLLSPPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        S SS  S  S     ++  + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  SHSSLLSPPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN

A0A5D3CCP4 Putative Membrane lipoprotein3.7e-0948.39Show/hide
Query:  SHSSLLSPPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN
        S SS  S  S     ++  + +LLLL+   F+SA R  P  T   P  S++   TTAFR+  Q F FLPKG PIPPS PS RHNS+VDS P N
Subjt:  SHSSLLSPPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN

SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA7.0e-0545.12Show/hide
Query:  MASSNAFLLLLLLLIPLAFTS---AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP
        MA     ++LL  ++ LA +S   AA    AT  +      N    T F++ H IF +LPKG PIPPSAPSKRHNS V+S P
Subjt:  MASSNAFLLLLLLLIPLAFTS---AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP

Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein5.0e-0645.12Show/hide
Query:  MASSNAFLLLLLLLIPLAFTS---AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP
        MA     ++LL  ++ LA +S   AA    AT  +      N    T F++ H IF +LPKG PIPPSAPSKRHNS V+S P
Subjt:  MASSNAFLLLLLLLIPLAFTS---AARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAP

AT5G64667.1 inflorescence deficient in abscission (IDA)-like 27.9e-0434.85Show/hide
Query:  LLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSL
        +LLLL++ L F + AR         P   HN   +++ +   Q   FLP+ FP+P S PS++HN +
Subjt:  LLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATATATAATCCCATTCCTTTTCCCCCTTTTTTTTCTCATTCCTCTCTTCTCTCTCCCCCTTCCCTTCCCATGGCCTCCTCCAACGCCTTCCTCCTCCTCCTCCT
TCTTCTAATTCCCCTTGCTTTCACCTCCGCCGCAAGGCCATTTCCGGCAACCACAACAATAATGCCGCCGCCGTCGCACAACACCCCAGCCACCACCGCCTTCCGCCACG
GTCATCAAATCTTCAGCTTCCTCCCCAAAGGCTTTCCCATTCCGCCCTCCGCTCCTTCAAAGAGACACAACTCGCTCGTTGACTCCGCCCCCCGAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATATATAATCCCATTCCTTTTCCCCCTTTTTTTTCTCATTCCTCTCTTCTCTCTCCCCCTTCCCTTCCCATGGCCTCCTCCAACGCCTTCCTCCTCCTCCTCCT
TCTTCTAATTCCCCTTGCTTTCACCTCCGCCGCAAGGCCATTTCCGGCAACCACAACAATAATGCCGCCGCCGTCGCACAACACCCCAGCCACCACCGCCTTCCGCCACG
GTCATCAAATCTTCAGCTTCCTCCCCAAAGGCTTTCCCATTCCGCCCTCCGCTCCTTCAAAGAGACACAACTCGCTCGTTGACTCCGCCCCCCGAAACTGA
Protein sequenceShow/hide protein sequence
MQIYNPIPFPPFFSHSSLLSPPSLPMASSNAFLLLLLLLIPLAFTSAARPFPATTTIMPPPSHNTPATTAFRHGHQIFSFLPKGFPIPPSAPSKRHNSLVDSAPRN