; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G006830 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G006830
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionF-box protein SKIP28
Genome locationCiama_Chr01:7563736..7566109
RNA-Seq ExpressionCaUC01G006830
SyntenyCaUC01G006830
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046341.1 F-box protein SKIP28 isoform X1 [Cucumis melo var. makuwa]1.6e-13881.85Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHIVVD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRS   QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIR+VYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

XP_004150124.1 F-box protein SKIP28 [Cucumis sativus]6.4e-14081.85Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEHDVLPWLHIVVD RLSSRLSDYTLGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK
        NCFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+TLSQ SHNLK+LMIGGIYNIENQHLEVL+ HL +NRS   QQ+ RQ HHLYHEH+DR +
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL ++F PVIDVQICPKCYDIR+VYDCSRERCKIKQ E  L DCRGCICCIPRCEECGGCVDDDEIEEA+C+ ILCSSCW QLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

XP_008467113.1 PREDICTED: F-box protein SKIP28 isoform X2 [Cucumis melo]1.7e-14078.18Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHIVVD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRS   QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIR+VYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN
         E                   LQQDMLCLN
Subjt:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN

XP_016903294.1 PREDICTED: F-box protein SKIP28 isoform X1 [Cucumis melo]9.2e-13982.45Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHIVVD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRS   QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIR+VYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IE
        I+
Subjt:  IE

XP_038906463.1 F-box protein SKIP28 [Benincasa hispida]3.8e-15389.4Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEP NPAA AGSS  GVR+EAGPPHEALFLVLSYLPLFELLSM +VCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDY LGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS--QQQERQHHHLYHEHIDRSKL
        NCFKISDSG HEVVEKNPLLTKLYVPGCTSLTP GVVRAV+TLSQHSHNLKSLMIGGIYNIEN+HLEVLKCHL +NRS  QQ+ERQ HHLY EHIDRSKL
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS--QQQERQHHHLYHEHIDRSKL

Query:  LCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNI
        L NEFQPVIDVQICPKC +IRSVYDCSRERCKIKQE+Q L DCRGCI CIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNR YCTRH  N+
Subjt:  LCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNI

Query:  ET
         +
Subjt:  ET

TrEMBL top hitse value%identityAlignment
A0A0A0KSU6 F-box domain-containing protein3.1e-14081.85Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEHDVLPWLHIVVD RLSSRLSDYTLGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK
        NCFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVVRAV+TLSQ SHNLK+LMIGGIYNIENQHLEVL+ HL +NRS   QQ+ RQ HHLYHEH+DR +
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL ++F PVIDVQICPKCYDIR+VYDCSRERCKIKQ E  L DCRGCICCIPRCEECGGCVDDDEIEEA+C+ ILCSSCW QLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

A0A1S3CSR5 F-box protein SKIP28 isoform X28.1e-14178.18Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHIVVD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRS   QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIR+VYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN
         E                   LQQDMLCLN
Subjt:  IETRSPCLHFLYLAKERCKAGLQQDMLCLN

A0A1S4E4Z1 F-box protein SKIP28 isoform X14.4e-13982.45Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHIVVD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRS   QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIR+VYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IE
        I+
Subjt:  IE

A0A5A7TYB5 F-box protein SKIP28 isoform X17.6e-13981.85Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEHDVLPWLHIVVD RLSSRLSDYTLGRIARKAGGRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NRS   QQ+ RQ HHLYHEH+DR  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRS---QQQERQHHHLYHEHIDRSK

Query:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN
        LL N+F P+IDVQICPKCYDIR+VYDCSRERCKIKQ E  L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Subjt:  LLCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN

Query:  IET
        + +
Subjt:  IET

A0A6J1FGL5 F-box protein SKIP281.4e-13277.96Show/hide
Query:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI
        MSEN + PN  A  GSSS GVR+ AGPPHEALFLVLSYLPLFELLSM AVCVSLRDAV HDVLPWLH+VVDR LSSRL+DY LGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHH--LYHEHIDRSKL
        NCFKISDS LHEVVE NPLLTKLYVPGCTSLTP GV+RAVETLSQHSHNL SLMIGGIYNIEN+HLEVLK HL KNRSQQQ++Q      +HEHI+ SKL
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHH--LYHEHIDRSKL

Query:  LCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNI
        L N++  +IDV++CPKC +I  VYDCSRERCKIKQE+++  +CRGC  C+PRCEECGGCVD DE EEAVCAGILC+SCWLQLPKCNHCNR YCTRH  N+
Subjt:  LCNEFQPVIDVQICPKCYDIRSVYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNI

Query:  ETRS
         + S
Subjt:  ETRS

SwissProt top hitse value%identityAlignment
A2RT62 F-box/LRR-repeat protein 168.1e-0529.59Show/hide
Query:  LSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFK
        ++D  L     + G    TL L++C++I++ G+  VV   P LT L + GC+ +T  G    VE ++++   L+SL +     I +  LE + C L +
Subjt:  LSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFK

Q5MJ12 F-box/LRR-repeat protein 168.1e-0529.59Show/hide
Query:  LSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFK
        ++D  L     + G    TL L++C++I++ G+  VV   P LT L + GC+ +T  G    VE ++++   L+SL +     I +  LE + C L +
Subjt:  LSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFK

Q9LK24 F-box protein At3g272902.1e-2935.83Show/hide
Query:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-VVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I + D  L  R++D +L ++ R+A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-VVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY

Query:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYD
        V GC  L+ AG+V  +  L S +   +KSL+ GG      +  + L   L  +     + +    Y     RS+    E   V D++ICP C     V+D
Subjt:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYD

Query:  CSRERCKIK-QEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSC
        C  + C +K Q   +   CR C+ CI RC ECG C++D E  +  C    C  C
Subjt:  CSRERCKIK-QEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSC

Q9LU91 F-box protein SKIP143.2e-3332.94Show/hide
Query:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC
        H A+   L +L   +LLS+  VC SL   V  D L W HI + R L+ ++++  L  +  +A G ++ L +++C +I+D  L  VV +N  + K+ VPGC
Subjt:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC

Query:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYDCSRE
        T +T  G++  +  L S     +K L + G++ +   H + L   L  +   +Q  Q    YH     + + C++    +D+++CPKC + + VYDC  E
Subjt:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYDCSRE

Query:  RCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK
         CK K++     +CR C  CI RC  CG C+ D E EE  C  +LC+ C    PK
Subjt:  RCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK

Q9ZU90 F-box protein SKIP281.5e-5441.73Show/hide
Query:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG
        HE L +VL YL  LFELLSM  V  SLRDA+  +   W  +V++  LSSRL+D  L   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG

Query:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYDCSRE
        C+ LTP G++  VE+LS+++H L++L I G+     QHL  L  +L                              +  ID+++CPKC ++R +  CSRE
Subjt:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYDCSRE

Query:  RCKIKQEEQTLGDCRGCICCIPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI
         C  KQ +     CRGC  CIPRC EC  C+   D E +EA C    +LC  CWL LPKC  CN+ YCT H   RH I
Subjt:  RCKIKQEEQTLGDCRGCICCIPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI

Arabidopsis top hitse value%identityAlignment
AT2G01620.1 RNI-like superfamily protein1.0e-5541.73Show/hide
Query:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG
        HE L +VL YL  LFELLSM  V  SLRDA+  +   W  +V++  LSSRL+D  L   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPG
Subjt:  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPG

Query:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYDCSRE
        C+ LTP G++  VE+LS+++H L++L I G+     QHL  L  +L                              +  ID+++CPKC ++R +  CSRE
Subjt:  CTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYDCSRE

Query:  RCKIKQEEQTLGDCRGCICCIPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI
         C  KQ +     CRGC  CIPRC EC  C+   D E +EA C    +LC  CWL LPKC  CN+ YCT H   RH I
Subjt:  RCKIKQEEQTLGDCRGCICCIPRCEECGGCV--DDDEIEEAVCAG--ILCSSCWLQLPKCNHCNRSYCTRH---RHNI

AT3G26000.1 Ribonuclease inhibitor2.2e-3432.94Show/hide
Query:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC
        H A+   L +L   +LLS+  VC SL   V  D L W HI + R L+ ++++  L  +  +A G ++ L +++C +I+D  L  VV +N  + K+ VPGC
Subjt:  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGC

Query:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYDCSRE
        T +T  G++  +  L S     +K L + G++ +   H + L   L  +   +Q  Q    YH     + + C++    +D+++CPKC + + VYDC  E
Subjt:  TSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYDCSRE

Query:  RCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK
         CK K++     +CR C  CI RC  CG C+ D E EE  C  +LC+ C    PK
Subjt:  RCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPK

AT3G27290.1 RNI-like superfamily protein1.5e-3035.83Show/hide
Query:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-VVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I + D  L  R++D +L ++ R+A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-VVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY

Query:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYD
        V GC  L+ AG+V  +  L S +   +KSL+ GG      +  + L   L  +     + +    Y     RS+    E   V D++ICP C     V+D
Subjt:  VPGCTSLTPAGVVRAVETL-SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRSVYD

Query:  CSRERCKIK-QEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSC
        C  + C +K Q   +   CR C+ CI RC ECG C++D E  +  C    C  C
Subjt:  CSRERCKIK-QEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAG
TTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCGTCGTCGATCGGCGTT
TGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTT
CACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTC
TCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGGAGCGGC
AACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATAAGGAGT
GTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCATTCCAAGGTGTGAAGAATGCGGTGGATG
TGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATTGCACGCGAC
ACCGTCATAATATTGAAACTAGAAGCCCTTGTTTGCATTTTTTGTATCTTGCAAAAGAACGTTGCAAGGCAGGGCTGCAACAAGATATGCTTTGTTTGAACAGGGAAAAT
GTAAATCTTGCTGAAAGAAAGGAAAATTGTAAGCATATTCAAGTTTATAAGTTTGGCCTCTCAAATTATTGTGCAACAACAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAG
TTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCGTCGTCGATCGGCGTT
TGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTT
CACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTC
TCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGGAGCGGC
AACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATAAGGAGT
GTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCATTCCAAGGTGTGAAGAATGCGGTGGATG
TGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATTGCACGCGAC
ACCGTCATAATATTGAAACTAGAAGCCCTTGTTTGCATTTTTTGTATCTTGCAAAAGAACGTTGCAAGGCAGGGCTGCAACAAGATATGCTTTGTTTGAACAGGGAAAAT
GTAAATCTTGCTGAAAGAAAGGAAAATTGTAAGCATATTCAAGTTTATAAGTTTGGCCTCTCAAATTATTGTGCAACAACAGTCTGA
Protein sequenceShow/hide protein sequence
MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGL
HEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRS
VYDCSRERCKIKQEEQTLGDCRGCICCIPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNIETRSPCLHFLYLAKERCKAGLQQDMLCLNREN
VNLAERKENCKHIQVYKFGLSNYCATTV