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CaUC01G007280 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G007280
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr01:8243309..8245179
RNA-Seq ExpressionCaUC01G007280
SyntenyCaUC01G007280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KVH99413.1 hypothetical protein Ccrd_022355 [Cynara cardunculus var. scolymus]1.8e-0454.1Show/hide
Query:  KSSNGVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
        KS +GVS+T    PSF T    S  LVTP +L LD N  +PRILFPVAL P  V P  T V
Subjt:  KSSNGVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
KVH99414.1 hypothetical protein Ccrd_022357 [Cynara cardunculus var. scolymus]7.5e-0657.89Show/hide
Query:  GVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
        GVSIT    PSF T   +S  LVTP EL  D N+ +PRILFPVAL P PV P  T V
Subjt:  GVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
PKI34828.1 hypothetical protein CRG98_044781, partial [Punica granatum]4.7e-0860.66Show/hide
Query:  KSSNGVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
        +S  GVSIT    PS  T  CNS  LVTP+EL LDL ALLPRI+FP AL P PV P  T+V
Subjt:  KSSNGVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
TrEMBL top hitse value%identityAlignment
A0A103XYU0 Uncharacterized protein8.9e-0554.1Show/hide
Query:  KSSNGVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
        KS +GVS+T    PSF T    S  LVTP +L LD N  +PRILFPVAL P  V P  T V
Subjt:  KSSNGVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
A0A118JZ27 Uncharacterized protein3.6e-0657.89Show/hide
Query:  GVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
        GVSIT    PSF T   +S  LVTP EL  D N+ +PRILFPVAL P PV P  T V
Subjt:  GVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
A0A2I0HSY9 Uncharacterized protein (Fragment)2.3e-0860.66Show/hide
Query:  KSSNGVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
        +S  GVSIT    PS  T  CNS  LVTP+EL LDL ALLPRI+FP AL P PV P  T+V
Subjt:  KSSNGVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLPRILFPVALFPFPVRPINTNV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTCATACAATAACACAACGGTGTTTTGTGCCGCCACGACGAGGAGGTTGTGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCCTTTCAAGTGCGTCGCGTAGACGG
CTATTCAGAGCTTCAAGTTCTTTGTTCGTCCCCTCCGGTGAAGAGGACAATGACAAAGTCCACGATTTTTGTTCCGAACAAAGTTTGAAGAGTTCGAACGGGGTG
TCGATCACATTTATGACGCTTCCATCTTTCCTAACACATGATTGCAATTCAGCAGATCTAGTAACGCCGGAAGAACTTGTCCTCGATTTGAATGCTCTTCTTCCA
AGAATACTGTTTCCAGTTGCACTTTTTCCATTCCCTGTGCGACCAATCAACACCAATGTTAGTGGAGAAACGATCTGA
mRNA sequenceShow/hide mRNA sequence
AGTCATACAATAACACAACGGTGTTTTGTGCCGCCACGACGAGGAGGTTGTGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCCTTTCAAGTGCGTCGCGTAGACGG
CTATTCAGAGCTTCAAGTTCTTTGTTCGTCCCCTCCGGTGAAGAGGACAATGACAAAGTCCACGATTTTTGTTCCGAACAAAGTTTGAAGAGTTCGAACGGGGTG
TCGATCACATTTATGACGCTTCCATCTTTCCTAACACATGATTGCAATTCAGCAGATCTAGTAACGCCGGAAGAACTTGTCCTCGATTTGAATGCTCTTCTTCCA
AGAATACTGTTTCCAGTTGCACTTTTTCCATTCCCTGTGCGACCAATCAACACCAATGTTAGTGGAGAAACGATCTGA
Protein sequenceShow/hide protein sequence
SHTITQRCFVPPRRGGCGGGGGGGGGGLSSASRRRLFRASSSLFVPSGEEDNDKVHDFCSEQSLKSSNGVSITFMTLPSFLTHDCNSADLVTPEELVLDLNALLP
RILFPVALFPFPVRPINTNVSGETI