; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G007340 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G007340
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionGlutamate decarboxylase
Genome locationCiama_Chr01:8346177..8347641
RNA-Seq ExpressionCaUC01G007340
SyntenyCaUC01G007340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CNV68992.1 Uncharacterised protein [Mycobacterium tuberculosis]2.0e-1127.46Show/hide
Query:  PMSFETMVNLPELNYTFGEVESEGGLVRSKVIDMENEFLGEILFGSPNHPTNSSVDKTILMAAHIDALHQRKPEVPFKLWIQKRRYEPTAGRIHVNGSIP
        P   E +V    L    GEV+ EG  V ++V+D EN+ L ++L  +P+   ++ + + IL+AA +D  H  +P++P+++ +QKR ++   GR+ V   + 
Subjt:  PMSFETMVNLPELNYTFGEVESEGGLVRSKVIDMENEFLGEILFGSPNHPTNSSVDKTILMAAHIDALHQRKPEVPFKLWIQKRRYEPTAGRIHVNGSIP

Query:  SSFLILLHQQIIQQLHIFEFTIL-------------------------------------NFKVSRKFLPTNLHIGTRHNIGLLISLPLCFP-PVLPLPL
        +       Q+       FEFT +                                     + +V+ + LP +L + T H IG     PL  P P+ P P 
Subjt:  SSFLILLHQQIIQQLHIFEFTIL-------------------------------------NFKVSRKFLPTNLHIGTRHNIGLLISLPLCFP-PVLPLPL

Query:  EGKPRQHDGLRRPH--RPNSDGGVGVSQG-GVEEMGNHVDAAVL
        +G+P QH  L       P   GGV V+Q  GV+++G+H   A L
Subjt:  EGKPRQHDGLRRPH--RPNSDGGVGVSQG-GVEEMGNHVDAAVL

KAF4380495.1 hypothetical protein G4B88_011741 [Cannabis sativa]4.3e-0660.66Show/hide
Query:  MMSLSHSGSIQVVTKEARLSLGLPSSMSSSLMIWKAASLGMELS------GMVNLGAESRT
        MMSLSHS SIQVVTKEA+LSLG+PS+MSSS M W AASLG+  S      G+ ++  E++T
Subjt:  MMSLSHSGSIQVVTKEARLSLGLPSSMSSSLMIWKAASLGMELS------GMVNLGAESRT

MCI60952.1 hypothetical protein [Trifolium medium]2.0e-1165.71Show/hide
Query:  ISSTSRSASVREKSSLITTRRTDTCFAPSGIGYAGTIHPNRRNISDTSNSSCRLRSLREKATTGTPMSFE
        +SS  RSASVRE S+L+TTR T  C AP GIGYAGT  P RRNI D  NSS    S RE ATTGTP+SFE
Subjt:  ISSTSRSASVREKSSLITTRRTDTCFAPSGIGYAGTIHPNRRNISDTSNSSCRLRSLREKATTGTPMSFE

TXG57022.1 hypothetical protein EZV62_018335 [Acer yangbiense]1.2e-0568Show/hide
Query:  KSSLITTRRTDTCFAPSGIGYAGTIHPNRRNISDTSNSSCRLRSLREKAT
        K SL+TTR T TC+A + I YAGTIHP RR+IS TSN S RL SLRE AT
Subjt:  KSSLITTRRTDTCFAPSGIGYAGTIHPNRRNISDTSNSSCRLRSLREKAT

TrEMBL top hitse value%identityAlignment
A0A0A9KAZ5 Glutamate decarboxylase2.9e-0857.14Show/hide
Query:  TFGEVESEGGLVRSKVIDMENEFLGEILFGSPNHPTNSSVDKTILMAAHIDALHQR
        TFGEVE E  LVR +++ MENEF  +IL   P  PTN+S+DK I +   IDALHQR
Subjt:  TFGEVESEGGLVRSKVIDMENEFLGEILFGSPNHPTNSSVDKTILMAAHIDALHQR

A0A392TJ15 Uncharacterized protein (Fragment)9.6e-1265.71Show/hide
Query:  ISSTSRSASVREKSSLITTRRTDTCFAPSGIGYAGTIHPNRRNISDTSNSSCRLRSLREKATTGTPMSFE
        +SS  RSASVRE S+L+TTR T  C AP GIGYAGT  P RRNI D  NSS    S RE ATTGTP+SFE
Subjt:  ISSTSRSASVREKSSLITTRRTDTCFAPSGIGYAGTIHPNRRNISDTSNSSCRLRSLREKATTGTPMSFE

A0A5C7HL19 Uncharacterized protein6.0e-0668Show/hide
Query:  KSSLITTRRTDTCFAPSGIGYAGTIHPNRRNISDTSNSSCRLRSLREKAT
        K SL+TTR T TC+A + I YAGTIHP RR+IS TSN S RL SLRE AT
Subjt:  KSSLITTRRTDTCFAPSGIGYAGTIHPNRRNISDTSNSSCRLRSLREKAT

A0A7J6GC03 DUF629 domain-containing protein2.1e-0660.66Show/hide
Query:  MMSLSHSGSIQVVTKEARLSLGLPSSMSSSLMIWKAASLGMELS------GMVNLGAESRT
        MMSLSHS SIQVVTKEA+LSLG+PS+MSSS M W AASLG+  S      G+ ++  E++T
Subjt:  MMSLSHSGSIQVVTKEARLSLGLPSSMSSSLMIWKAASLGMELS------GMVNLGAESRT

A0A803Q738 Uncharacterized protein1.1e-0761.9Show/hide
Query:  ESMMSLSHSGSIQVVTKEARLSLGLPSSMSSSLMIWKAASLGMELS------GMVNLGAESRT
        E+MMSLSHSGSIQVVTKEA+LSLG+PS+MSSS M W AASLG+  S      G+ ++  E++T
Subjt:  ESMMSLSHSGSIQVVTKEARLSLGLPSSMSSSLMIWKAASLGMELS------GMVNLGAESRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTATTTCCCTCCCTGTTTCCTCTGCCGTCTTTTTCCCACTTGTTTCCTTCTTACCATTTTCTAAGCTCCCCATTTTTGCACTATTCTTTGGTGGAAGAGTGTCT
AACTCAGCCAAAACCTTTACAATATCAAGCACAAGCCGCTCCGCAAGCGTGCGAGAGAAATCTTCTCTTATCACCACACGAAGAACTGATACGTGTTTCGCCCCT
TCCGGCATTGGATACGCCGGCACGATCCACCCAAACCGCCGCAACATCTCTGATACCTCAAACTCGTCGTGCCGGCTTCGGTCTTTGAGGGAGAAGGCCACCACG
GGCACTCCCATGTCCTTTGAAACTATGGTGAACCTCCCTGAATTAAATTATACCTTTGGAGAAGTTGAGAGTGAAGGTGGGTTGGTCCGCTCCAAGGTAATTGAT
ATGGAAAATGAGTTCTTGGGGGAGATCTTGTTTGGTTCTCCAAATCACCCAACCAATTCCAGCGTAGACAAGACCATACTTATGGCCGCTCACATTGATGCTCTT
CACCAGAGGAAGCCTGAAGTCCCATTCAAGCTCTGGATACAGAAACGGCGCTATGAACCCACCGCTGGCCGCATCCACGTGAATGGGAGTATCCCATCCAGTTTC
CTTATTCTTCTCCACCAACAAATCATTCAACAGCTTCACATCTTCGAATTCACCATTCTCAACTTCAAAGTATCTCGCAAATTTCTCCCAACAAACTTGCACATT
GGCACCCGTCACAATATTGGGCTTCTCATAAGCCTTCCCCTCTGCTTTCCGCCTGTTCTGCCACTTCCTCTTGAAGGCAAGCCCCGCCAGCATGATGGCCTCCGA
CGACCCCACCGTCCCAACTCCGACGGCGGTGTCGGAGTCTCCCAAGGGGGCGTTGAAGAGATGGGCAATCATGTTGACGCAGCGGTTCTGAAGCTCGGTGAGTCC
ATGATGAGCTTATCGCATTCGGGCTCCATCCAAGTAGTGACGAAGGAGGCTAGATTAAGCCTTGGGTTGCCGTCGAGCATGAGCTCGTCGTTGATGATTTGGAAG
GCGGCCTCCTTGGGCATGGAGTTGTCGGGAATGGTGAACCTTGGAGCAGAGTCCCGAACG
mRNA sequenceShow/hide mRNA sequence
GCTATTTCCCTCCCTGTTTCCTCTGCCGTCTTTTTCCCACTTGTTTCCTTCTTACCATTTTCTAAGCTCCCCATTTTTGCACTATTCTTTGGTGGAAGAGTGTCT
AACTCAGCCAAAACCTTTACAATATCAAGCACAAGCCGCTCCGCAAGCGTGCGAGAGAAATCTTCTCTTATCACCACACGAAGAACTGATACGTGTTTCGCCCCT
TCCGGCATTGGATACGCCGGCACGATCCACCCAAACCGCCGCAACATCTCTGATACCTCAAACTCGTCGTGCCGGCTTCGGTCTTTGAGGGAGAAGGCCACCACG
GGCACTCCCATGTCCTTTGAAACTATGGTGAACCTCCCTGAATTAAATTATACCTTTGGAGAAGTTGAGAGTGAAGGTGGGTTGGTCCGCTCCAAGGTAATTGAT
ATGGAAAATGAGTTCTTGGGGGAGATCTTGTTTGGTTCTCCAAATCACCCAACCAATTCCAGCGTAGACAAGACCATACTTATGGCCGCTCACATTGATGCTCTT
CACCAGAGGAAGCCTGAAGTCCCATTCAAGCTCTGGATACAGAAACGGCGCTATGAACCCACCGCTGGCCGCATCCACGTGAATGGGAGTATCCCATCCAGTTTC
CTTATTCTTCTCCACCAACAAATCATTCAACAGCTTCACATCTTCGAATTCACCATTCTCAACTTCAAAGTATCTCGCAAATTTCTCCCAACAAACTTGCACATT
GGCACCCGTCACAATATTGGGCTTCTCATAAGCCTTCCCCTCTGCTTTCCGCCTGTTCTGCCACTTCCTCTTGAAGGCAAGCCCCGCCAGCATGATGGCCTCCGA
CGACCCCACCGTCCCAACTCCGACGGCGGTGTCGGAGTCTCCCAAGGGGGCGTTGAAGAGATGGGCAATCATGTTGACGCAGCGGTTCTGAAGCTCGGTGAGTCC
ATGATGAGCTTATCGCATTCGGGCTCCATCCAAGTAGTGACGAAGGAGGCTAGATTAAGCCTTGGGTTGCCGTCGAGCATGAGCTCGTCGTTGATGATTTGGAAG
GCGGCCTCCTTGGGCATGGAGTTGTCGGGAATGGTGAACCTTGGAGCAGAGTCCCGAACG
Protein sequenceShow/hide protein sequence
AISLPVSSAVFFPLVSFLPFSKLPIFALFFGGRVSNSAKTFTISSTSRSASVREKSSLITTRRTDTCFAPSGIGYAGTIHPNRRNISDTSNSSCRLRSLREKATT
GTPMSFETMVNLPELNYTFGEVESEGGLVRSKVIDMENEFLGEILFGSPNHPTNSSVDKTILMAAHIDALHQRKPEVPFKLWIQKRRYEPTAGRIHVNGSIPSSF
LILLHQQIIQQLHIFEFTILNFKVSRKFLPTNLHIGTRHNIGLLISLPLCFPPVLPLPLEGKPRQHDGLRRPHRPNSDGGVGVSQGGVEEMGNHVDAAVLKLGES
MMSLSHSGSIQVVTKEARLSLGLPSSMSSSLMIWKAASLGMELSGMVNLGAESRT