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CaUC01G007500 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G007500
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionMATH domain and coiled-coil domain-containing protein
Genome locationCiama_Chr01:8584737..8587236
RNA-Seq ExpressionCaUC01G007500
SyntenyCaUC01G007500
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002083 - MATH/TRAF domain
IPR008974 - TRAF-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146377.1 uncharacterized protein LOC111015606 [Momordica charantia]4.3e-1252.08Show/hide
Query:  LYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKK-------------ERSY----FILLSDLKEPKKGFIHDNSIIVE
        LYPKG  KAT  +LSLYL  DS K+LP+GSQVYIE+EM++LSQ   V  NKK             E S+    F+ LSDL EP KGFI+++++IVE
Subjt:  LYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKK-------------ERSY----FILLSDLKEPKKGFIHDNSIIVE

XP_022146379.1 ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]1.2e-1449.46Show/hide
Query:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKKERSY--------FILLSDLKEPKKGFIHDNSIIVE
        Y W + LYPKG S A  G+LSLYL+ DS KE+ QGS+VY+EYE+A+LSQ    +P K+  +Y        FI LS+LK+P KG++H++++ VE
Subjt:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKKERSY--------FILLSDLKEPKKGFIHDNSIIVE

XP_022146380.1 probable inactive serine/threonine-protein kinase fnkC [Momordica charantia]4.6e-1450Show/hide
Query:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMA---------ILSQANWVKPNKKERSYFILLSDLKEPKKGFIHDNSIIVE
        Y W + LYPKGSSKA  G+LSLYL ++S++E+PQGSQVY+EYE +         + S   W  PN      F+ L DL EP +GFI D++IIVE
Subjt:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMA---------ILSQANWVKPNKKERSYFILLSDLKEPKKGFIHDNSIIVE

XP_038874970.1 uncharacterized protein LOC120067490 [Benincasa hispida]5.5e-1546.39Show/hide
Query:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQ----------ANWVKPNKKERSY--FILLSDLKEPKKGFIHDNSIIVE
        YTW I LYP+G S A  GY+S++L FDSF++LPQGS+VY+EY++A+LSQ           +W     K   +  F+ LS++KEP KGF+ D++++VE
Subjt:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQ----------ANWVKPNKKERSY--FILLSDLKEPKKGFIHDNSIIVE

XP_038875772.1 uncharacterized protein LOC120068142 [Benincasa hispida]3.5e-1445.79Show/hide
Query:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQ----------------------ANWVKPNKKERSYFILLSDLKEPKKGFIH
        Y W I LYP G SKA +G+LS+YLLFDS  +LPQGSQVY+EYEMAILSQ                        W  PN      F  LSDL+EP KG++ 
Subjt:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQ----------------------ANWVKPNKKERSYFILLSDLKEPKKGFIH

Query:  DNSIIVE
        +++++ E
Subjt:  DNSIIVE

TrEMBL top hitse value%identityAlignment
A0A6J1CX47 probable inactive serine/threonine-protein kinase fnkC2.2e-1450Show/hide
Query:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMA---------ILSQANWVKPNKKERSYFILLSDLKEPKKGFIHDNSIIVE
        Y W + LYPKGSSKA  G+LSLYL ++S++E+PQGSQVY+EYE +         + S   W  PN      F+ L DL EP +GFI D++IIVE
Subjt:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMA---------ILSQANWVKPNKKERSYFILLSDLKEPKKGFIHDNSIIVE

A0A6J1CXZ0 ubiquitin carboxyl-terminal hydrolase 12-like5.9e-1549.46Show/hide
Query:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKKERSY--------FILLSDLKEPKKGFIHDNSIIVE
        Y W + LYPKG S A  G+LSLYL+ DS KE+ QGS+VY+EYE+A+LSQ    +P K+  +Y        FI LS+LK+P KG++H++++ VE
Subjt:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKKERSY--------FILLSDLKEPKKGFIHDNSIIVE

A0A6J1CYF6 uncharacterized protein LOC1110156116.1e-1247Show/hide
Query:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKE-LPQGSQVYIEYEMAILSQAN----------WVKPNKKERSY----FILLSDLKEPKKGFIHDNSIIVE
        Y W I L+PKG S+ +AG+LSLYL+FDSFKE LPQG +VY E+E+A+LS+            W +    E       F+ L DLKE KKG+I D+++IV+
Subjt:  YTWMISLYPKGSSKATAGYLSLYLLFDSFKE-LPQGSQVYIEYEMAILSQAN----------WVKPNKKERSY----FILLSDLKEPKKGFIHDNSIIVE

A0A6J1CZF3 uncharacterized protein LOC1110156062.1e-1252.08Show/hide
Query:  LYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKK-------------ERSY----FILLSDLKEPKKGFIHDNSIIVE
        LYPKG  KAT  +LSLYL  DS K+LP+GSQVYIE+EM++LSQ   V  NKK             E S+    F+ LSDL EP KGFI+++++IVE
Subjt:  LYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKK-------------ERSY----FILLSDLKEPKKGFIHDNSIIVE

A0A6J1CZF7 uncharacterized protein LOC1110156107.5e-1049.4Show/hide
Query:  ISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKKERSY--FILLSDLKEPKKGFIHDNSIIVE
        +SLYPKGS KA+  YLSL+L  +S KELPQG +VY E+E+A+LS+  W +       +  F+ L DL E  KG+I D+++IVE
Subjt:  ISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKKERSY--FILLSDLKEPKKGFIHDNSIIVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31390.1 TRAF-like family protein6.0e-0438.3Show/hide
Query:  WMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQ
        W +  YPKG+ ++T   LSLYL    F+ LP G + +I+Y + +++Q
Subjt:  WMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQ

AT2G25320.1 TRAF-like family protein2.1e-0426.09Show/hide
Query:  SSCLWRGY-ETGGYGRFYTWMISLYPKGSSKATAGYLSLYL-LFDSFKELPQGSQVYIEYEMAILS---------QANWVKPNKKERSY----FILLSDL
        +  LW  Y + GG    Y   + +YP+G S+A  GY+S+YL + D           +  Y ++I++         + +W + + K++S+    F L S +
Subjt:  SSCLWRGY-ETGGYGRFYTWMISLYPKGSSKATAGYLSLYL-LFDSFKELPQGSQVYIEYEMAILS---------QANWVKPNKKERSY----FILLSDL

Query:  KEPKKGFIHDNSIIV
         +PK GF+ +N  ++
Subjt:  KEPKKGFIHDNSIIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTTTTCTTGTCTTCTTGTTTGTGGCGAGGCTATGAAACAGGCGGATATGGCAGATTCTACACTTGGATGATATCCTTGTATCCTAAAGGATCCTCCAAAGCAAC
CGCTGGTTATCTGTCACTGTACTTGTTGTTTGATAGTTTCAAAGAACTTCCTCAAGGTTCTCAAGTTTACATTGAATATGAGATGGCCATATTGAGTCAAGCTAATTGGG
TAAAACCAAACAAAAAAGAAAGATCATATTTCATATTGTTGAGCGATCTCAAGGAACCGAAGAAGGGGTTTATTCACGATAATAGCATTATTGTTGAAGATGCACAGCCT
TTTGAAGATGGTTTAAAATTTTGTATATCTGAACAAATGTGTTATGTTTTTGCTCTTGCAAAAGCCAAGAGATTCATCAATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCTTTTCTTGTCTTCTTGTTTGTGGCGAGGCTATGAAACAGGCGGATATGGCAGATTCTACACTTGGATGATATCCTTGTATCCTAAAGGATCCTCCAAAGCAAC
CGCTGGTTATCTGTCACTGTACTTGTTGTTTGATAGTTTCAAAGAACTTCCTCAAGGTTCTCAAGTTTACATTGAATATGAGATGGCCATATTGAGTCAAGCTAATTGGG
TAAAACCAAACAAAAAAGAAAGATCATATTTCATATTGTTGAGCGATCTCAAGGAACCGAAGAAGGGGTTTATTCACGATAATAGCATTATTGTTGAAGATGCACAGCCT
TTTGAAGATGGTTTAAAATTTTGTATATCTGAACAAATGTGTTATGTTTTTGCTCTTGCAAAAGCCAAGAGATTCATCAATTTATGA
Protein sequenceShow/hide protein sequence
MQLFLSSCLWRGYETGGYGRFYTWMISLYPKGSSKATAGYLSLYLLFDSFKELPQGSQVYIEYEMAILSQANWVKPNKKERSYFILLSDLKEPKKGFIHDNSIIVEDAQP
FEDGLKFCISEQMCYVFALAKAKRFINL