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CaUC01G007690 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G007690
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionMATH domain and coiled-coil domain-containing protein
Genome locationCiama_Chr01:8748999..8749339
RNA-Seq ExpressionCaUC01G007690
SyntenyCaUC01G007690
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR008974 - TRAF-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ98189.1 MATH domain and coiled-coil domain-containing protein [Cucumis melo var. makuwa]1.7e-0551.67Show/hide
Query:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ
        +ALYPNGD     S+     HISLYLV  E++I S   E+NV+ TFLVYD L+ KY ++Q
Subjt:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ

XP_022146379.1 ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]1.4e-0758.33Show/hide
Query:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ
        +A+YP GDV  + S+D    HISLYLV AEDDI +   E+NV+ TFLVYD+LKDKY ++Q
Subjt:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ

XP_022146381.1 ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia]6.9e-0748.72Show/hide
Query:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ-ALVSNFDSTIIDMQMER
        +A+YPNGDV  + S+     HISLYLV AED I +   E+NV+ TFLVYDNL DKY ++Q   V  F S   + + E+
Subjt:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ-ALVSNFDSTIIDMQMER

XP_022146383.1 uncharacterized protein LOC111015611 [Momordica charantia]2.4e-0756.67Show/hide
Query:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ
        +ALYPNGD   + S      +ISLYLV+AED+I S   E+NV++TFLVYD+L+DKY +IQ
Subjt:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ

XP_038874970.1 uncharacterized protein LOC120067490 [Benincasa hispida]8.4e-1370Show/hide
Query:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ
        +ALYPNGD   + +N     HISLYLVSAED+ISS GLEI VMI FLVYDNLKD+YW+IQ
Subjt:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ

TrEMBL top hitse value%identityAlignment
A0A5D3BGH9 MATH domain and coiled-coil domain-containing protein8.2e-0653.33Show/hide
Query:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ
        +A+YPNGD   + SN     HISLYLV AED+ ++   E+NV  TFLVYD LKD+Y + Q
Subjt:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ

A0A5D3BGM0 MATH domain and coiled-coil domain-containing protein8.2e-0651.67Show/hide
Query:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ
        +ALYPNGD     S+     HISLYLV  E++I S   E+NV+ TFLVYD L+ KY ++Q
Subjt:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ

A0A6J1CXZ0 ubiquitin carboxyl-terminal hydrolase 12-like6.7e-0858.33Show/hide
Query:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ
        +A+YP GDV  + S+D    HISLYLV AEDDI +   E+NV+ TFLVYD+LKDKY ++Q
Subjt:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ

A0A6J1CYF6 uncharacterized protein LOC1110156111.1e-0756.67Show/hide
Query:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ
        +ALYPNGD   + S      +ISLYLV+AED+I S   E+NV++TFLVYD+L+DKY +IQ
Subjt:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ

A0A6J1CZ69 ubiquitin carboxyl-terminal hydrolase 13-like3.3e-0748.72Show/hide
Query:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ-ALVSNFDSTIIDMQMER
        +A+YPNGDV  + S+     HISLYLV AED I +   E+NV+ TFLVYDNL DKY ++Q   V  F S   + + E+
Subjt:  VALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQ-ALVSNFDSTIIDMQMER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTTTGTATCCGAATGGAGATGTCACAACATCAACATCAAATGACGAATATGATCGTCATATATCCCTTTATTTGGTATCAGCTGAAGATGACATTTCATCATA
TGGGTTAGAGATTAATGTTATGATTACATTTCTTGTTTATGATAATCTCAAAGACAAGTATTGGAGCATACAAGCTTTAGTTTCGAATTTTGACTCGACGATAATTGACA
TGCAGATGGAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCTTTGTATCCGAATGGAGATGTCACAACATCAACATCAAATGACGAATATGATCGTCATATATCCCTTTATTTGGTATCAGCTGAAGATGACATTTCATCATA
TGGGTTAGAGATTAATGTTATGATTACATTTCTTGTTTATGATAATCTCAAAGACAAGTATTGGAGCATACAAGCTTTAGTTTCGAATTTTGACTCGACGATAATTGACA
TGCAGATGGAAAGGTAA
Protein sequenceShow/hide protein sequence
MVALYPNGDVTTSTSNDEYDRHISLYLVSAEDDISSYGLEINVMITFLVYDNLKDKYWSIQALVSNFDSTIIDMQMER