; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G008360 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G008360
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionATP-dependent DNA helicase At3g02060, chloroplastic
Genome locationCiama_Chr01:9477814..9492114
RNA-Seq ExpressionCaUC01G008360
SyntenyCaUC01G008360
Gene Ontology termsGO:0000956 - nuclear-transcribed mRNA catabolic process (biological process)
GO:0006396 - RNA processing (biological process)
GO:0016072 - rRNA metabolic process (biological process)
GO:0034661 - ncRNA catabolic process (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004534 - 5'-3' exoribonuclease activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR001650 - Helicase, C-terminal
IPR003711 - CarD-like/TRCF domain
IPR011545 - DEAD/DEAH box helicase domain
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR036101 - CarD-like/TRCF domain superfamily
IPR037235 - TRCF-like, C-terminal D7 domai


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066106.1 ATP-dependent DNA helicase [Cucumis melo var. makuwa]0.0e+0072.41Show/hide
Query:  MALLFSPASDVSSSRPLVAFKLGSFPSL--WGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRT
        M+ LFSPA DVSSSRPL+AFKL SFP+L  WGLFNRN TF  FP R VS+TNV YAEDVIVPGTAKSARRR+QIELERDSI+VLNERI RFHGKR+SSRT
Subjt:  MALLFSPASDVSSSRPLVAFKLGSFPSL--WGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRML
         MDSEEADRYIQMVKEQQQRGLQKLKGD+QRK+SDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTEP EYVFIEYADGMAKLPV QASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRML

Query:  YRYNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLI
        YRYNLP  N                                                   S   E S            +AF+DVERDLTERETPMDRLI
Subjt:  YRYNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLS
        LVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDA                                                    
Subjt:  LVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLS

Query:  ASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLS
                                            S+ ++  P  VP    L    ++ +K                  + K + ++      +   + 
Subjt:  ASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLS

Query:  GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKS
        GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKS
Subjt:  GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKS

Query:  LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP
        LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP
Subjt:  LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP

Query:  MKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK
        MKIL GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMETNMNKKVF+LISDSMTSEVHRNCLS+ EHQIK
Subjt:  MKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK

XP_004150202.1 ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis sativus]0.0e+0072.19Show/hide
Query:  MALLFSPASDVSSSRPLVAFKLGSFPSL--WGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRT
        MA L SPA DVSSS P++ FKL SFP+L  WGLFNRNSTF  FP R VSITNVVYAEDVIVPGTAKS+RRR+QIELERDSI++LNERI RFHGKR+SSRT
Subjt:  MALLFSPASDVSSSRPLVAFKLGSFPSL--WGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRML
        AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRK+SDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTE IEYVFIEYADGMAKLPV QASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRML

Query:  YRYNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLI
        YRY+LP  N                                                   S   E S            +AF+DVE+DLT RETPMDRLI
Subjt:  YRYNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLS
        LVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDA                                                    
Subjt:  LVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLS

Query:  ASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLS
                                            S+ ++  P  VP    L    ++ +K                  + K + ++      +   + 
Subjt:  ASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLS

Query:  GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKS
        GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKS
Subjt:  GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKS

Query:  LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP
        LLSD+ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP
Subjt:  LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP

Query:  MKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK
        MKIL GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMETNMNKKVFKLISDSMTSEVHRNCLS+ EHQIK
Subjt:  MKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK

XP_008465367.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic [Cucumis melo]0.0e+0072.3Show/hide
Query:  MALLFSPASDVSSSRPLVAFKLGSFPSL--WGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRT
        M+ LFSPA DVSSSRPL+AFKL SFP+L  WGLFNRN TF  FP R VS+TNV YAEDVIVPGTAKSARRR+QIELERDSI+VLNERI RFHGKR+SSRT
Subjt:  MALLFSPASDVSSSRPLVAFKLGSFPSL--WGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRML
         MDSEEADRYIQMVKEQQQRGLQKLKGD+QRK+SDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTEP EYVFIEYADGMAKLPV QASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRML

Query:  YRYNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLI
        YRYNLP  N                                                   S   E S            +AF+DVERDLTERETPMDRLI
Subjt:  YRYNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLS
        LVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDA                                                    
Subjt:  LVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLS

Query:  ASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLS
                                            S+ ++  P  VP    L    ++ +K                  + K + ++      +   + 
Subjt:  ASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLS

Query:  GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKS
        GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKS
Subjt:  GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKS

Query:  LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP
        LLSDEALERLAALE+CRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP
Subjt:  LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP

Query:  MKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK
        MKIL GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMETNMNKKVF+LISDSMTSEVHRNCLS+ EHQIK
Subjt:  MKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK

XP_038907244.1 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1 [Benincasa hispida]0.0e+0073.47Show/hide
Query:  MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAM
        MALLFSPA DVSSSRPLVAFKLGSFPSL GLFNRNSTF  FPKRYVSITNV+YAEDVIVPG AKSARRREQIELERDSI++LNERIRRFHGKRESSRT M
Subjt:  MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAM

Query:  DSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYR
        DSEEADRYIQMVKEQQQRGLQKLKGDRQRK SDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPV QASRMLYR
Subjt:  DSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYR

Query:  YNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLICG
        YNLP  N                                                   S   E S            +AF+DVERDLT+RETPMDRLICG
Subjt:  YNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLICG

Query:  DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLV
        DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFS FPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYS LGLLV
Subjt:  DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLV

Query:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSAS
        VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDA                                                      
Subjt:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSAS

Query:  PVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGL
                                          S+ ++  P  VP    L    ++ +K                  + + + ++      +   + GL
Subjt:  PVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGL

Query:  EEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLL
        EEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLL
Subjt:  EEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLL

Query:  SDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK
        S+EALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK
Subjt:  SDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK

Query:  ILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK
        IL GAE AAETDIWTLMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLS+ EHQIK
Subjt:  ILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK

XP_038907245.1 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X2 [Benincasa hispida]0.0e+0077.14Show/hide
Query:  MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAM
        MALLFSPA DVSSSRPLVAFKLGSFPSL GLFNRNSTF  FPKRYVSITNV+YAEDVIVPG AKSARRREQIELERDSI++LNERIRRFHGKRESSRT M
Subjt:  MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAM

Query:  DSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYR
        DSEEADRYIQMVKEQQQRGLQKLKGDRQRK SDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPV QASRMLYR
Subjt:  DSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYR

Query:  YNL------PGMNASIFTEIS------------KAFKDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQR
        YNL      P    S   E S            +AF+DVERDLT+RETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQR
Subjt:  YNL------PGMNASIFTEIS------------KAFKDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQR

Query:  FSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFR
        FS FPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYS LGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFR
Subjt:  FSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFR

Query:  DARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTG
        DA                                                                                        S+ ++  P  
Subjt:  DARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTG

Query:  VPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILI
        VP    L    ++ +K                  + + + ++      +   + GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILI
Subjt:  VPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILI

Query:  CTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGD
        CTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLS+EALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGD
Subjt:  CTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGD

Query:  VGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVR
        VGNVGIDLFFEMLF+SLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKIL GAE AAETDIWTLMQFTENLRR HGKEPYSMEILLKKLYVR
Subjt:  VGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVR

Query:  RMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK
        RMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLS+ EHQIK
Subjt:  RMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK

TrEMBL top hitse value%identityAlignment
A0A1S3CNQ6 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0072.3Show/hide
Query:  MALLFSPASDVSSSRPLVAFKLGSFPSL--WGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRT
        M+ LFSPA DVSSSRPL+AFKL SFP+L  WGLFNRN TF  FP R VS+TNV YAEDVIVPGTAKSARRR+QIELERDSI+VLNERI RFHGKR+SSRT
Subjt:  MALLFSPASDVSSSRPLVAFKLGSFPSL--WGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRML
         MDSEEADRYIQMVKEQQQRGLQKLKGD+QRK+SDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTEP EYVFIEYADGMAKLPV QASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRML

Query:  YRYNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLI
        YRYNLP  N                                                   S   E S            +AF+DVERDLTERETPMDRLI
Subjt:  YRYNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLS
        LVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDA                                                    
Subjt:  LVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLS

Query:  ASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLS
                                            S+ ++  P  VP    L    ++ +K                  + K + ++      +   + 
Subjt:  ASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLS

Query:  GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKS
        GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKS
Subjt:  GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKS

Query:  LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP
        LLSDEALERLAALE+CRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP
Subjt:  LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP

Query:  MKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK
        MKIL GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMETNMNKKVF+LISDSMTSEVHRNCLS+ EHQIK
Subjt:  MKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK

A0A5A7VIC8 ATP-dependent DNA helicase0.0e+0072.41Show/hide
Query:  MALLFSPASDVSSSRPLVAFKLGSFPSL--WGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRT
        M+ LFSPA DVSSSRPL+AFKL SFP+L  WGLFNRN TF  FP R VS+TNV YAEDVIVPGTAKSARRR+QIELERDSI+VLNERI RFHGKR+SSRT
Subjt:  MALLFSPASDVSSSRPLVAFKLGSFPSL--WGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRT

Query:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRML
         MDSEEADRYIQMVKEQQQRGLQKLKGD+QRK+SDGFNYKVDPYTLRSGDYVVHKKVGIGRFV IKFDVQKGSTEP EYVFIEYADGMAKLPV QASRML
Subjt:  AMDSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRML

Query:  YRYNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLI
        YRYNLP  N                                                   S   E S            +AF+DVERDLTERETPMDRLI
Subjt:  YRYNLPGMN--------------------------------------------------ASIFTEIS------------KAFKDVERDLTERETPMDRLI

Query:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
        CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL
Subjt:  CGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGL

Query:  LVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLS
        LVVDEEQRFGVKQKEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDA                                                    
Subjt:  LVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLS

Query:  ASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLS
                                            S+ ++  P  VP    L    ++ +K                  + K + ++      +   + 
Subjt:  ASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLS

Query:  GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKS
        GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEA+AYLFYPDKS
Subjt:  GLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKS

Query:  LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP
        LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP
Subjt:  LLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENP

Query:  MKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK
        MKIL GAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMETNMNKKVF+LISDSMTSEVHRNCLS+ EHQIK
Subjt:  MKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK

A0A6J1CJT5 ATP-dependent DNA helicase At3g02060, chloroplastic isoform X10.0e+0070.68Show/hide
Query:  MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAM
        MALL SPA DVS+ RPLVAF+LGSFP  W LFNRN T  R PKR +S+TNVVYAEDV+VPGTAKSARRREQIELERDSI++LNER+RR+HGKRESSRTAM
Subjt:  MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAM

Query:  DSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYR
        D+EEADRYIQMVKEQQQRGLQKLKGDRQR +SDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPV QASRMLYR
Subjt:  DSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYR

Query:  YNLPG----------MNASIFTEISK----------------------------------------------------AFKDVERDLTERETPMDRLICG
        YNLP           +N +   E  K                                                    AF DVE+DLTERETPMDRLICG
Subjt:  YNLPG----------MNASIFTEISK----------------------------------------------------AFKDVERDLTERETPMDRLICG

Query:  DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLV
        DVGFGKTEVALRAIFCVVS+GKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHL+MIKEGQL+IIVGTHSLLGDRVVY+NLGLLV
Subjt:  DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLV

Query:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSAS
        VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDA                                                      
Subjt:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSAS

Query:  PVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGL
                                          S+ ++  P  VP    L    ++ +K                  + K + ++      +   + GL
Subjt:  PVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGL

Query:  EEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLL
        EEVK+FLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLL
Subjt:  EEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLL

Query:  SDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK
        SD+ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKID+DI PHLPSEYINYLENPMK
Subjt:  SDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK

Query:  ILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK
        I+ GAE+AAETDIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGISRIYASGK VCMET MN+KVFKLI+DSMTSEVH+NCLS+ EH IK
Subjt:  ILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK

A0A6J1GZL7 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0070.01Show/hide
Query:  MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAM
        MALL  P +DVSSSRPLVAF+LGSFP LWGLFNRN     F KR VSITNVVYAEDV+VPG AKSARRREQIELE DSITVLNERIRRFH KRESS+TAM
Subjt:  MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAM

Query:  DSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYR
        D+EEADRYIQMVKEQQQRGLQKLKG+RQ+K+SDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEP EYVFIEYADGMAKL V QASRMLYR
Subjt:  DSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYR

Query:  YNLPGMN---------------------------------------------------------ASIFT-----EISKAFKDVERDLTERETPMDRLICG
        Y+LP  N                                                         A+ F+     +  +AF+DVE+DLTERETPMDRLICG
Subjt:  YNLPGMN---------------------------------------------------------ASIFT-----EISKAFKDVERDLTERETPMDRLICG

Query:  DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLV
        DVGFGKTEVALRAIF VVSAGKQAMVLAPTIVLAKQHFEVIT RFSSFPDVQIGLLSRFQTK+EK+KHLEMIKEGQLNI+VGTHSLLGDRVVYSNLGLLV
Subjt:  DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLV

Query:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSAS
        VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDA                                                      
Subjt:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSAS

Query:  PVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGL
                                          S+ ++  P  VP    L    +   +K+ S +              K + ++      +   + GL
Subjt:  PVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGL

Query:  EEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLL
        EEVK+FLEASFPDIEI LAHGKQYSKQLEETMENFALG IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LL
Subjt:  EEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLL

Query:  SDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK
        SD+ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK
Subjt:  SDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK

Query:  ILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK
        I+ GAE+AAETDIW LMQFTENLRR HGKEPYSMEILLKKLYVRRMAADLGI RIYASGK VCMET MNKKVFKLIS+SM SEVHRNCL++ EHQIK
Subjt:  ILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK

A0A6J1JT22 ATP-dependent DNA helicase At3g02060, chloroplastic0.0e+0069.79Show/hide
Query:  MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAM
        MALL  P +DVSSSRPLVAF+LGSFP LWGLFNRN       KR+VSITNVVYAEDV+V GTAKSARRREQIELERDSITVLNERIRRFH KRESS+TAM
Subjt:  MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAM

Query:  DSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYR
        D+ EADRYIQMVKEQQQRGLQKLKG+R++K+SDG++YKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEP EYVFIEYADGMAKL V QASRMLYR
Subjt:  DSEEADRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYR

Query:  YNLPGMN---------------------------------------------------------ASIFT-----EISKAFKDVERDLTERETPMDRLICG
        Y+LP  N                                                         A+ F+     +  +AF+DVE+DLTERETPMDRLICG
Subjt:  YNLPGMN---------------------------------------------------------ASIFT-----EISKAFKDVERDLTERETPMDRLICG

Query:  DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLV
        DVGFGKTEVALRAIF VVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTK+EK+KHLEMIKEGQLNI+VGTHSLLGDRVVYSNLGLLV
Subjt:  DVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLV

Query:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSAS
        VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDA                                                      
Subjt:  VDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSAS

Query:  PVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGL
                                          S+ ++  P  VP    L    ++ +K                  + K + ++      +   + GL
Subjt:  PVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGL

Query:  EEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLL
        EEVK+FLEASFPDIEI LAHGKQYSKQLEETMENF+LG IKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDK+LL
Subjt:  EEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLL

Query:  SDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK
        SD+ALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQ+GDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK
Subjt:  SDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMK

Query:  ILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK
        I+ GAE+AAETDIW LMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGI RIYASGK VCMET MNKKVFKLIS+SM SEVHRNCL++ EHQIK
Subjt:  ILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIK

SwissProt top hitse value%identityAlignment
F4JFJ3 ATP-dependent DNA helicase At3g02060, chloroplastic5.8e-26759.89Show/hide
Query:  PLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIEL-ERDSITVLNERIRRFHGKRESSRTAMDSEEADRYIQMVKE
        PLV  KL SFP    LF+      RF ++  S+  +V A   +    AK  R RE+ EL E DSI++LNERIRR  GKRE++R AMDSEEA++YI MVKE
Subjt:  PLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIEL-ERDSITVLNERIRRFHGKRESSRTAMDSEEADRYIQMVKE

Query:  QQQRGLQKLKGDRQRKQSDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYRYNLPG------
        QQ+RGLQKLKG RQ  ++ G   F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+EP+EYVFIEYADGMAKLP+ QASR+LYRYNLP       
Subjt:  QQQRGLQKLKGDRQRKQSDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYRYNLPG------

Query:  -----MNASIF---------------------------------------------------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTEVAL
              + S++                                                    +  +AF DVE+DLTERETPMDRLICGDVGFGKTEVAL
Subjt:  -----MNASIF---------------------------------------------------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTEVAL

Query:  RAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQ
        RAIFCVVS GKQAMVLAPTIVLAKQH++VI++RFS +P +++GLLSRFQTKAEKE++LEMIK G LNIIVGTHSLLG RVVYSNLGLLVVDEEQRFGVKQ
Subjt:  RAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQ

Query:  KEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAV
        KEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDA                                                                 
Subjt:  KEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAV

Query:  SELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASF
                               S+ S+  P  +P               I++ L++ ++  ++     + D+  +V    +   + GLEEV +FLE +F
Subjt:  SELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASF

Query:  PDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAAL
        PDI+IA+AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD+ALERL+AL
Subjt:  PDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAAL

Query:  EECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERAAET
        EECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+I+  AE+AAE 
Subjt:  EECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERAAET

Query:  DIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQI
        D+W+LMQFTENLRR +GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+TNM+KKVFKLI+DSMT +V+R+ L Y   QI
Subjt:  DIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQI

Q49V12 Transcription-repair-coupling factor8.6e-8530.6Show/hide
Query:  YIQMVKEQQQRGLQKLKGDRQRKQSDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKF-----------------------------DVQK------
        Y+Q+V    +R L K K  ++ KQ        K+  Y  L+ GDYVVH   G+GR++G++                               VQK      
Subjt:  YIQMVKEQQQRGLQKLKGDRQRKQSDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKF-----------------------------DVQK------

Query:  --------GSTE------PIEYVFIEYADGMAKLPVNQASRMLYRYNLPGMNASIF---------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTE
                G TE       ++    + AD + +L   +   + Y++       + F          + SK+ +++++D+ E E PMDRL+CGDVG+GKTE
Subjt:  --------GSTE------PIEYVFIEYADGMAKLPVNQASRMLYRYNLPGMNASIF---------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTE

Query:  VALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFG
        VA+RA F  V  GKQ   L PT +LA+QH+E + +R   FP +++ L+SRF+T  E ++  E +K G ++I+VGTH LLG  + Y +LGLL+VDEEQRFG
Subjt:  VALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFG

Query:  VKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWK
        V+ KE+I S K ++DVLTL+ATPIPRTL++++ G RD       P  +F                                                   
Subjt:  VKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWK

Query:  IAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLE
                                             P    +       IK+       L+R L       +D +        L + +  + E +E L+
Subjt:  IAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLE

Query:  ASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERL
           PD  I +AHG+   + LEETM +F   +  I++ T I+E+G+D+ NANT+I++D  +FGL+QLYQLRGRVGR+ +  +AY  +P   +LS+ A +RL
Subjt:  ASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERL

Query:  AALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAER-
         A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++    +        ++I+++I+ +LP+EYI   ++ ++I K   + 
Subjt:  AALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAER-

Query:  AAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAV
         +ET    LM   + L       P  +E LL+ + ++  A   G++ I   GK V
Subjt:  AAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAV

Q4L3G0 Transcription-repair-coupling factor7.8e-8631.03Show/hide
Query:  YIQMVKEQQQRGLQKLKGDRQRKQSDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKF-----------------------------DVQK------
        Y+Q+V    +R L K K  +QRK++   +   K+  Y  L  GDYVVH   G+GR++G++                               VQK      
Subjt:  YIQMVKEQQQRGLQKLKGDRQRKQSDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKF-----------------------------DVQK------

Query:  --------GSTE------PIEYVFIEYADGMAKLPVNQASRMLYRYNLPGMNASIF---------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTE
                G +E       ++    + AD +  L   +   + Y+Y       S F          + +K+  +++ D+ ERE PMDRL+CGDVG+GKTE
Subjt:  --------GSTE------PIEYVFIEYADGMAKLPVNQASRMLYRYNLPGMNASIF---------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTE

Query:  VALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFG
        VA+RA F  V  GKQ   L PT +LA+QH+E + +R   FP VQI L+SRF++  E ++  E +K G ++I+VGTH LLG  + Y +LGLL+VDEEQRFG
Subjt:  VALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFG

Query:  VKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWK
        V+ KE+I + KT++DVLTL+ATPIPRTL++++ G RD       P  +F                                                   
Subjt:  VKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWK

Query:  IAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLE
                                             P    +       IK+       L+R L       +D +        L + +  + E +E L+
Subjt:  IAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLE

Query:  ASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERL
           PD  IA+AHG+   + LEETM +F  G+  IL+ T I+E+G+D+ NANT+I+++  +FGL+QLYQLRGRVGR+ +  +AY  +    +L++ A ERL
Subjt:  ASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERL

Query:  AALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERA
         A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++    +        V+++++++ +LP+EYI   +  ++I K   R 
Subjt:  AALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERA

Query:  AETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAV
         ET+   L    + L       P  +E LL+ + ++  A   G++ I   GK +
Subjt:  AETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAV

Q55750 Transcription-repair-coupling factor2.8e-9933.38Show/hide
Query:  RKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQA-SRMLYRY------NLPGMNASIFTEIS------
        RK+    + +VD   L  GDYVVHK  GIG+F  +K D         EY+ I+YADG+ ++P +   S   +R+       L  M   ++          
Subjt:  RKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQA-SRMLYRY------NLPGMNASIFTEIS------

Query:  ----------------------------------------------KAFKDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAG-KQAMVLAPT
                                                      KA +DV+RDL E + PMDRL+CGDVGFGKTEVA+RAIF  V++G KQ  +LAPT
Subjt:  ----------------------------------------------KAFKDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAG-KQAMVLAPT

Query:  IVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSAT
         VL +QH+  + +RF+ +P + IGLL+RF+T +EK++ L  +K G+L+I+VGT  +LG  V + +LGLLV+DEEQRFGV QKEKI + KT +DVLTL+AT
Subjt:  IVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSAT

Query:  PIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAVSELKFQSFPTIGQFINPSL
        PIPRTLY++L+G R+                                                                                     
Subjt:  PIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAVSELKFQSFPTIGQFINPSL

Query:  LNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASFPDIEIALAHGKQYSKQLEE
            S+ ++  P+  P    L     ++I+      T ++  L         D+  +V    +   + G+EE+   L    P   IA+ HG+    +LE 
Subjt:  LNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASFPDIEIALAHGKQYSKQLEE

Query:  TMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAALEECRELGQGFQLAERDMGI
        TM  F  G+  IL+CT I+E+GLDI   NTIIV+D Q+FGLAQLYQLRGRVGR+  +AHA+L YP++  L+++A  RL AL+E  +LG G+QLA RDM I
Subjt:  TMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAALEECRELGQGFQLAERDMGI

Query:  RGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERAAETDIWTLMQFTENLRRHHGKE
        RG G + G +Q+G +  +G + + EML D++ ++    +  V  +  +ID+ +   +PS+YI  LE  M   +       TD   L +   +    +G  
Subjt:  RGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERAAETDIWTLMQFTENLRRHHGKE

Query:  PYSMEILLKKLYVRRMAADLGISRIYASGKA-VCMETNMNKKVFKLISDSMTSEV
        P  +E L K + ++ +A  LG SRI   GK  + +ET M +  +KL+++++ + +
Subjt:  PYSMEILLKKLYVRRMAADLGISRIYASGKA-VCMETNMNKKVFKLISDSMTSEV

Q5HRQ2 Transcription-repair-coupling factor1.9e-8430.77Show/hide
Query:  YIQMVKEQQQRGLQKLKGDRQRKQSDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKF-----------------------------DVQK------
        Y+Q+V    +R L K +  +QRK++   +   K+  Y  L  GDY+VH   G+GR++G++                               VQK      
Subjt:  YIQMVKEQQQRGLQKLKGDRQRKQSDGFN--YKVDPY-TLRSGDYVVHKKVGIGRFVGIKF-----------------------------DVQK------

Query:  --------GSTE------PIEYVFIEYADGMAKLPVNQASRMLYRYNLPGMNASIF---------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTE
                G TE       ++    + AD +  L   +   + Y+Y       S F          + SK+  +++ D+ ER  PMDRL+CGDVG+GKTE
Subjt:  --------GSTE------PIEYVFIEYADGMAKLPVNQASRMLYRYNLPGMNASIF---------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTE

Query:  VALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFG
        VA+RA F  V  GKQ   L PT +LA+QH+E + +R   FP V+I L+SRF+T  E  +  E +K G ++I+VGTH LLG  + Y +LGLL+VDEEQRFG
Subjt:  VALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFG

Query:  VKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWK
        V+ KE+I + K ++DVLTL+ATPIPRTL++++ G RD       P  +F                                                   
Subjt:  VKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWK

Query:  IAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLE
                                             P    +       IK+       L+R L       +D +        L + +  + E +E L+
Subjt:  IAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLE

Query:  ASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERL
           PD  IA+AHG+   + LEETM +F   +  IL+ T I+E+G+D+ NANT+I+++  +FGL+QLYQLRGRVGR+ +  +AY  +P   +L++ A ERL
Subjt:  ASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERL

Query:  AALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERA
         A++E  ELG GF++A RD+ IRG G + G+QQ G + +VG DL+ +ML +++++    +  S     +++++ ++ +LP+EYI   +  ++I K   R 
Subjt:  AALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERA

Query:  AETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAV
         ET+   L    + L       P  +E LL  + ++  A   G+  I   GK++
Subjt:  AETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAV

Arabidopsis top hitse value%identityAlignment
AT2G01440.1 DEAD/DEAH box RNA helicase family protein4.0e-3728.42Show/hide
Query:  ERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQ----IGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTH
        +R  PM+RL+ GDVG GKT VA  A   V+ +G QA  +APT +LA QH+E       +   V     IGLL+      +     + ++ G ++ I+GTH
Subjt:  ERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQ----IGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTH

Query:  SLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIAS--FKTSI---------------------DVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAE
        SL+ +++ YS L + VVDE+QRFGV Q+ K  S  + TS+                      VL +SATPIPR+L LAL G     +  G P G+    E
Subjt:  SLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIAS--FKTSI---------------------DVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAE

Query:  TQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKK
        T     +  G               K ++S  LE L +                +  +P I              QS   P                   
Subjt:  TQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKK

Query:  IQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTI
                               Q R  +  L           E +   FP     L HG+  S   EE +  F  G+ +IL+ T ++E G+D+ +A+ +
Subjt:  IQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTI

Query:  IVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTG
        +V + ++FG+AQL+QLRGRVGR  +++        K LL   +   L  L    +   GF LA  D+ +RG G + G++Q+G
Subjt:  IVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTG

AT3G02060.1 DEAD/DEAH box helicase, putative4.1e-26859.89Show/hide
Query:  PLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIEL-ERDSITVLNERIRRFHGKRESSRTAMDSEEADRYIQMVKE
        PLV  KL SFP    LF+      RF ++  S+  +V A   +    AK  R RE+ EL E DSI++LNERIRR  GKRE++R AMDSEEA++YI MVKE
Subjt:  PLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIEL-ERDSITVLNERIRRFHGKRESSRTAMDSEEADRYIQMVKE

Query:  QQQRGLQKLKGDRQRKQSDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYRYNLPG------
        QQ+RGLQKLKG RQ  ++ G   F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+EP+EYVFIEYADGMAKLP+ QASR+LYRYNLP       
Subjt:  QQQRGLQKLKGDRQRKQSDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYRYNLPG------

Query:  -----MNASIF---------------------------------------------------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTEVAL
              + S++                                                    +  +AF DVE+DLTERETPMDRLICGDVGFGKTEVAL
Subjt:  -----MNASIF---------------------------------------------------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTEVAL

Query:  RAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQ
        RAIFCVVS GKQAMVLAPTIVLAKQH++VI++RFS +P +++GLLSRFQTKAEKE++LEMIK G LNIIVGTHSLLG RVVYSNLGLLVVDEEQRFGVKQ
Subjt:  RAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQ

Query:  KEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAV
        KEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDA                                                                 
Subjt:  KEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAV

Query:  SELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASF
                               S+ S+  P  +P               I++ L++ ++  ++     + D+  +V    +   + GLEEV +FLE +F
Subjt:  SELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASF

Query:  PDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAAL
        PDI+IA+AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD+ALERL+AL
Subjt:  PDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAAL

Query:  EECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERAAET
        EECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+I+  AE+AAE 
Subjt:  EECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERAAET

Query:  DIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQI
        D+W+LMQFTENLRR +GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+TNM+KKVFKLI+DSMT +V+R+ L Y   QI
Subjt:  DIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQI

AT3G02060.2 DEAD/DEAH box helicase, putative4.1e-26859.89Show/hide
Query:  PLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIEL-ERDSITVLNERIRRFHGKRESSRTAMDSEEADRYIQMVKE
        PLV  KL SFP    LF+      RF ++  S+  +V A   +    AK  R RE+ EL E DSI++LNERIRR  GKRE++R AMDSEEA++YI MVKE
Subjt:  PLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIEL-ERDSITVLNERIRRFHGKRESSRTAMDSEEADRYIQMVKE

Query:  QQQRGLQKLKGDRQRKQSDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYRYNLPG------
        QQ+RGLQKLKG RQ  ++ G   F+YKVDPY+L SGDYVVHKKVGIGRFVGIKFDV K S+EP+EYVFIEYADGMAKLP+ QASR+LYRYNLP       
Subjt:  QQQRGLQKLKGDRQRKQSDG---FNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYRYNLPG------

Query:  -----MNASIF---------------------------------------------------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTEVAL
              + S++                                                    +  +AF DVE+DLTERETPMDRLICGDVGFGKTEVAL
Subjt:  -----MNASIF---------------------------------------------------TEISKAFKDVERDLTERETPMDRLICGDVGFGKTEVAL

Query:  RAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQ
        RAIFCVVS GKQAMVLAPTIVLAKQH++VI++RFS +P +++GLLSRFQTKAEKE++LEMIK G LNIIVGTHSLLG RVVYSNLGLLVVDEEQRFGVKQ
Subjt:  RAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQLNIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQ

Query:  KEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAV
        KEKIASFKTS+DVLTLSATPIPRTLYLALTGFRDA                                                                 
Subjt:  KEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSESLPHSKSLWSKGLEKLSASPVFPTCWKIAV

Query:  SELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASF
                               S+ S+  P  +P               I++ L++ ++  ++     + D+  +V    +   + GLEEV +FLE +F
Subjt:  SELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKRVGTLSLSHCLSGLEEVKEFLEASF

Query:  PDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAAL
        PDI+IA+AHGKQYSKQLEETME FA G IKILICTNIVESGLDIQNANTII+QDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSD+ALERL+AL
Subjt:  PDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALERLAAL

Query:  EECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERAAET
        EECRELGQGFQLAE+DMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLF+SLSKV+E R+ SVPY  VKIDI+INP LPSEY+NYLENPM+I+  AE+AAE 
Subjt:  EECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLENPMKILKGAERAAET

Query:  DIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQI
        D+W+LMQFTENLRR +GKEPYSMEI+LKKLYVRRMAADLG++RIYASGK V M+TNM+KKVFKLI+DSMT +V+R+ L Y   QI
Subjt:  DIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQI

AT5G26742.1 DEAD box RNA helicase (RH3)2.6e-0430.68Show/hide
Query:  HGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALER
        HG     Q E T+  F  G   +L+ T++   GLDI N + +I  ++       +++  GR GRA KE  A L +      +  +LER
Subjt:  HGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALER

AT5G26742.2 DEAD box RNA helicase (RH3)2.6e-0430.68Show/hide
Query:  HGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALER
        HG     Q E T+  F  G   +L+ T++   GLDI N + +I  ++       +++  GR GRA KE  A L +      +  +LER
Subjt:  HGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKSLLSDEALER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTACTTTTTTCACCCGCATCAGACGTTTCCTCTTCCCGACCTCTTGTAGCATTCAAACTCGGCTCATTTCCCAGCCTATGGGGACTCTTCAACCGCAAC
TCTACTTTCCTGCGCTTCCCTAAGCGATATGTTTCGATTACTAACGTTGTCTATGCCGAAGATGTTATAGTTCCTGGTACCGCTAAATCGGCGAGGCGGAGAGAG
CAAATTGAGCTTGAGCGAGACTCTATCACGGTTCTCAATGAGAGAATTCGACGCTTTCATGGGAAGAGGGAGTCCTCGAGAACGGCTATGGACTCCGAGGAGGCA
GACCGGTACATTCAGATGGTGAAGGAGCAGCAGCAAAGGGGCTTGCAGAAGTTGAAGGGGGATAGGCAAAGGAAACAGAGCGATGGTTTTAATTATAAGGTTGAT
CCTTATACGCTTCGTTCTGGGGATTATGTTGTCCATAAGAAGGTTGGTATTGGCCGATTCGTCGGGATTAAATTTGATGTTCAGAAAGGTTCTACGGAGCCTATT
GAGTATGTGTTCATTGAGTATGCTGATGGGATGGCGAAGCTTCCTGTTAATCAGGCGTCTCGAATGCTGTATCGCTATAATCTACCAGGAATGAATGCATCTATA
TTTACTGAGATCTCGAAGGCTTTCAAAGATGTAGAGAGAGATTTGACAGAGAGGGAGACTCCGATGGACAGATTGATTTGTGGAGATGTCGGCTTTGGTAAAACT
GAGGTTGCGCTGCGTGCAATCTTCTGTGTAGTCTCGGCAGGAAAGCAAGCTATGGTTCTAGCACCAACGATAGTCCTTGCCAAACAACATTTTGAAGTTATCACA
CAAAGATTTTCTTCATTTCCTGATGTCCAGATTGGATTGTTGAGCAGGTTCCAGACAAAAGCAGAGAAAGAGAAGCATCTTGAAATGATCAAAGAAGGTCAATTG
AACATTATTGTTGGGACTCATTCACTTCTTGGAGATCGTGTTGTATATAGTAATTTAGGGCTTCTAGTTGTTGACGAGGAACAGAGGTTTGGTGTCAAACAGAAG
GAGAAAATTGCATCCTTTAAAACTTCAATTGATGTTCTCACTCTCTCTGCAACACCGATACCTCGGACTCTATATTTAGCATTGACTGGATTTCGTGATGCTAGA
AAGAGCCATGGATTTCCCTCTGGAAAATTTCAAAAGGCAGAAACACAAAGCAACCCTTTTCATTCTCCAGGGAAGTTGAATGTTGGCTATAAAACATCCGAAAGT
CTCCCTCACTCCAAGTCATTATGGTCCAAGGGTCTCGAAAAGCTTTCTGCATCCCCTGTTTTTCCGACTTGTTGGAAGATTGCTGTGTCCGAGCTCAAATTTCAA
TCATTTCCAACAATAGGTCAGTTCATTAATCCTTCCCTTCTCAACATTTCAAGCATTCAGTCTTCCACATCCCCAACCGGAGTGCCAACAGTGAAGAGATTGAAA
GTTATGGGGAGGAAGATAATCAAGAAAATTCAAAGCAAGTTGACAACTTTGCAGAGGAGCTTAATTCTATCTTTCAAATCGAAGAAGGACGACAAACAAAAGAGG
GTTGGAACTCTTTCCTTAAGCCATTGCCTCTCAGGACTTGAAGAAGTGAAGGAATTTCTTGAGGCAAGTTTTCCAGACATTGAAATAGCACTTGCTCATGGAAAG
CAATACTCAAAGCAACTTGAAGAGACCATGGAAAATTTTGCACTTGGTGATATTAAGATTCTTATATGCACAAACATTGTCGAAAGTGGCCTGGATATTCAAAAT
GCAAACACCATCATTGTTCAGGATGTTCAACAATTTGGGTTAGCCCAATTATACCAGCTGCGTGGAAGAGTGGGCCGGGCTGACAAGGAAGCACATGCATATTTG
TTTTACCCAGACAAGTCCCTGCTATCTGACGAAGCACTGGAAAGGCTTGCTGCCCTTGAAGAATGCCGTGAACTTGGGCAAGGTTTCCAACTTGCTGAGAGAGAC
ATGGGCATAAGAGGCTTTGGTACCATCTTTGGCGAGCAACAAACTGGTGATGTTGGAAATGTTGGCATTGATCTCTTCTTTGAAATGCTTTTTGACAGCTTGTCC
AAGGTTGACGAACACAGGGTAGTCTCTGTCCCATACCAGTCAGTGAAGATTGATATAGATATTAATCCTCATTTGCCTTCTGAGTACATTAATTATTTGGAGAAT
CCCATGAAAATACTTAAAGGAGCTGAGAGAGCTGCTGAGACAGACATTTGGACTTTAATGCAATTTACTGAGAATTTACGCCGTCATCATGGAAAAGAGCCGTAT
TCCATGGAGATTCTTCTCAAGAAGCTTTATGTGAGGAGAATGGCAGCGGATCTAGGAATTTCTCGGATATATGCTTCTGGAAAGGCCGTTTGCATGGAAACTAAC
ATGAATAAGAAAGTTTTCAAGTTGATATCAGATTCAATGACATCAGAGGTGCATCGGAATTGTTTGTCTTATGGGGAACATCAGATCAAGGACACAACCTGCAGT
TATCTGTCCAAAATATATAGCAGTGCCTGGGATCTGCTCGTGTATACGACGATATCGAGGCTCTCCGAGAATGGCTAA
mRNA sequenceShow/hide mRNA sequence
GCTTCCACGTACGGTTTTAGTATCGGTCGAAATCCAAAAACCCCTCCAAAACCTCCACATTATTATCCTCAAAGCTCTCTTCCACTCCTTCAATGGCGGAATTTC
CATCTCCATCATCGTTTTCACTCGATTTACCACTTGCTTAACACCCTACCACTCCTCTGTTTCAAATCTCTTACCTTGTTCTTTAATGGCTTTACTTTTTTCACC
CGCATCAGACGTTTCCTCTTCCCGACCTCTTGTAGCATTCAAACTCGGCTCATTTCCCAGCCTATGGGGACTCTTCAACCGCAACTCTACTTTCCTGCGCTTCCC
TAAGCGATATGTTTCGATTACTAACGTTGTCTATGCCGAAGATGTTATAGTTCCTGGTACCGCTAAATCGGCGAGGCGGAGAGAGCAAATTGAGCTTGAGCGAGA
CTCTATCACGGTTCTCAATGAGAGAATTCGACGCTTTCATGGGAAGAGGGAGTCCTCGAGAACGGCTATGGACTCCGAGGAGGCAGACCGGTACATTCAGATGGT
GAAGGAGCAGCAGCAAAGGGGCTTGCAGAAGTTGAAGGGGGATAGGCAAAGGAAACAGAGCGATGGTTTTAATTATAAGGTTGATCCTTATACGCTTCGTTCTGG
GGATTATGTTGTCCATAAGAAGGTTGGTATTGGCCGATTCGTCGGGATTAAATTTGATGTTCAGAAAGGTTCTACGGAGCCTATTGAGTATGTGTTCATTGAGTA
TGCTGATGGGATGGCGAAGCTTCCTGTTAATCAGGCGTCTCGAATGCTGTATCGCTATAATCTACCAGGAATGAATGCATCTATATTTACTGAGATCTCGAAGGC
TTTCAAAGATGTAGAGAGAGATTTGACAGAGAGGGAGACTCCGATGGACAGATTGATTTGTGGAGATGTCGGCTTTGGTAAAACTGAGGTTGCGCTGCGTGCAAT
CTTCTGTGTAGTCTCGGCAGGAAAGCAAGCTATGGTTCTAGCACCAACGATAGTCCTTGCCAAACAACATTTTGAAGTTATCACACAAAGATTTTCTTCATTTCC
TGATGTCCAGATTGGATTGTTGAGCAGGTTCCAGACAAAAGCAGAGAAAGAGAAGCATCTTGAAATGATCAAAGAAGGTCAATTGAACATTATTGTTGGGACTCA
TTCACTTCTTGGAGATCGTGTTGTATATAGTAATTTAGGGCTTCTAGTTGTTGACGAGGAACAGAGGTTTGGTGTCAAACAGAAGGAGAAAATTGCATCCTTTAA
AACTTCAATTGATGTTCTCACTCTCTCTGCAACACCGATACCTCGGACTCTATATTTAGCATTGACTGGATTTCGTGATGCTAGAAAGAGCCATGGATTTCCCTC
TGGAAAATTTCAAAAGGCAGAAACACAAAGCAACCCTTTTCATTCTCCAGGGAAGTTGAATGTTGGCTATAAAACATCCGAAAGTCTCCCTCACTCCAAGTCATT
ATGGTCCAAGGGTCTCGAAAAGCTTTCTGCATCCCCTGTTTTTCCGACTTGTTGGAAGATTGCTGTGTCCGAGCTCAAATTTCAATCATTTCCAACAATAGGTCA
GTTCATTAATCCTTCCCTTCTCAACATTTCAAGCATTCAGTCTTCCACATCCCCAACCGGAGTGCCAACAGTGAAGAGATTGAAAGTTATGGGGAGGAAGATAAT
CAAGAAAATTCAAAGCAAGTTGACAACTTTGCAGAGGAGCTTAATTCTATCTTTCAAATCGAAGAAGGACGACAAACAAAAGAGGGTTGGAACTCTTTCCTTAAG
CCATTGCCTCTCAGGACTTGAAGAAGTGAAGGAATTTCTTGAGGCAAGTTTTCCAGACATTGAAATAGCACTTGCTCATGGAAAGCAATACTCAAAGCAACTTGA
AGAGACCATGGAAAATTTTGCACTTGGTGATATTAAGATTCTTATATGCACAAACATTGTCGAAAGTGGCCTGGATATTCAAAATGCAAACACCATCATTGTTCA
GGATGTTCAACAATTTGGGTTAGCCCAATTATACCAGCTGCGTGGAAGAGTGGGCCGGGCTGACAAGGAAGCACATGCATATTTGTTTTACCCAGACAAGTCCCT
GCTATCTGACGAAGCACTGGAAAGGCTTGCTGCCCTTGAAGAATGCCGTGAACTTGGGCAAGGTTTCCAACTTGCTGAGAGAGACATGGGCATAAGAGGCTTTGG
TACCATCTTTGGCGAGCAACAAACTGGTGATGTTGGAAATGTTGGCATTGATCTCTTCTTTGAAATGCTTTTTGACAGCTTGTCCAAGGTTGACGAACACAGGGT
AGTCTCTGTCCCATACCAGTCAGTGAAGATTGATATAGATATTAATCCTCATTTGCCTTCTGAGTACATTAATTATTTGGAGAATCCCATGAAAATACTTAAAGG
AGCTGAGAGAGCTGCTGAGACAGACATTTGGACTTTAATGCAATTTACTGAGAATTTACGCCGTCATCATGGAAAAGAGCCGTATTCCATGGAGATTCTTCTCAA
GAAGCTTTATGTGAGGAGAATGGCAGCGGATCTAGGAATTTCTCGGATATATGCTTCTGGAAAGGCCGTTTGCATGGAAACTAACATGAATAAGAAAGTTTTCAA
GTTGATATCAGATTCAATGACATCAGAGGTGCATCGGAATTGTTTGTCTTATGGGGAACATCAGATCAAGGACACAACCTGCAGTTATCTGTCCAAAATATATAG
CAGTGCCTGGGATCTGCTCGTGTATACGACGATATCGAGGCTCTCCGAGAATGGCTAAGACTTCACTCAGGTCACAATTTATTTTGTCCCTTGTGTCTGTATATC
ATATATTCATTAAATCTTTGGTATCATGTAGTTGGATTAGAAGTTCTCATCATAACTTTTACCTGAATTTTTTTTGCAAATTTTCTATATATGAGATTAGGGTAT
GTTGTAAAGAAATTACAAGTTTGTAACTCTAAATAGTTTAGGGAATGGTTGAAGTAGGAACCATCAAGCATGGAGTTACTTTTTAGATACAGCAATTACTTTGGT
TCCATCGTTTGAACATTTAGCAAGAATAAAGTGAAAATAGCTATATGTTATTGTA
Protein sequenceShow/hide protein sequence
MALLFSPASDVSSSRPLVAFKLGSFPSLWGLFNRNSTFLRFPKRYVSITNVVYAEDVIVPGTAKSARRREQIELERDSITVLNERIRRFHGKRESSRTAMDSEEA
DRYIQMVKEQQQRGLQKLKGDRQRKQSDGFNYKVDPYTLRSGDYVVHKKVGIGRFVGIKFDVQKGSTEPIEYVFIEYADGMAKLPVNQASRMLYRYNLPGMNASI
FTEISKAFKDVERDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFEVITQRFSSFPDVQIGLLSRFQTKAEKEKHLEMIKEGQL
NIIVGTHSLLGDRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSIDVLTLSATPIPRTLYLALTGFRDARKSHGFPSGKFQKAETQSNPFHSPGKLNVGYKTSES
LPHSKSLWSKGLEKLSASPVFPTCWKIAVSELKFQSFPTIGQFINPSLLNISSIQSSTSPTGVPTVKRLKVMGRKIIKKIQSKLTTLQRSLILSFKSKKDDKQKR
VGTLSLSHCLSGLEEVKEFLEASFPDIEIALAHGKQYSKQLEETMENFALGDIKILICTNIVESGLDIQNANTIIVQDVQQFGLAQLYQLRGRVGRADKEAHAYL
FYPDKSLLSDEALERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFDSLSKVDEHRVVSVPYQSVKIDIDINPHLPSEYINYLEN
PMKILKGAERAAETDIWTLMQFTENLRRHHGKEPYSMEILLKKLYVRRMAADLGISRIYASGKAVCMETNMNKKVFKLISDSMTSEVHRNCLSYGEHQIKDTTCS
YLSKIYSSAWDLLVYTTISRLSENG