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CaUC01G009630 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G009630
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPhloem lectin
Genome locationCiama_Chr01:12207175..12207563
RNA-Seq ExpressionCaUC01G009630
SyntenyCaUC01G009630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_001284457.1 protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis melo]2.4e-0842.17Show/hide
Query:  LGLRTQFGHCLSHILPQSDDKIL-YPSYILLFEQLLFGINLNNGAQ-----------AMYIPPKALTIALIHDPRQWQWIPVE
        L ++ +FGHCLS+ILP + + ++ +PSY  L++QL  GI LNNG +             ++ PK+L+IA I D R W+WI VE
Subjt:  LGLRTQFGHCLSHILPQSDDKIL-YPSYILLFEQLLFGINLNNGAQ-----------AMYIPPKALTIALIHDPRQWQWIPVE

WP_219729244.1 PP2 domain-containing protein, partial [Pectobacterium odoriferum]5.9e-2356.57Show/hide
Query:  MNPEEIEAIIKYLGLRTQFGHCLSHILPQSDDKILYPSYILLFEQLLFGINLNNGAQ-----------AMYIPPKALTIALIHDPRQWQWIPVEYYENR
        M+PEE+EA  KYLGL+ Q GHCLS+ILPQ+D+K+L+PSYI LF+QL++GI+LNNGAQ            +YIPPK+L IA  HDPR W+W  +E ++ R
Subjt:  MNPEEIEAIIKYLGLRTQFGHCLSHILPQSDDKILYPSYILLFEQLLFGINLNNGAQ-----------AMYIPPKALTIALIHDPRQWQWIPVEYYENR

XP_038893562.1 lectin-like [Benincasa hispida]1.4e-1143.01Show/hide
Query:  MNPEEIEAIIKYLGLRTQFGHCLSHILPQSDDKILYPSYILLFEQLLFGINLNNG-----------AQAMYIPPKALTIALIHDPRQWQWIPV
        M+PEE+EA  KYLG++  +GH L  I   SDDK+  P+++ LF+QLL G++ N G           +  ++I PKAL+IA ++D R W+WI V
Subjt:  MNPEEIEAIIKYLGLRTQFGHCLSHILPQSDDKILYPSYILLFEQLLFGINLNNG-----------AQAMYIPPKALTIALIHDPRQWQWIPV

XP_038893806.1 lectin-like [Benincasa hispida]1.7e-0938.64Show/hide
Query:  LGLRTQFGHCLSHILPQSDDKIL-YPSYILLFEQLLFGINLNNG-----------AQAMYIPPKALTIALIHDPRQWQWIPVEYYENR
        LG++ ++GHCL  IL ++ D ++ +PS+I L++QL+ GI L+NG           + + Y+ PK+ +IA I DPR W+W  VE++  R
Subjt:  LGLRTQFGHCLSHILPQSDDKIL-YPSYILLFEQLLFGINLNNG-----------AQAMYIPPKALTIALIHDPRQWQWIPVEYYENR

XP_038893816.1 lectin-like [Benincasa hispida]5.4e-0838.64Show/hide
Query:  LGLRTQFGHCLSHILPQSDDKIL-YPSYILLFEQLLFGINLNNG-----------AQAMYIPPKALTIALIHDPRQWQWIPVEYYENR
        LG++ ++GHCL  IL ++ D ++ +PS+I L++QL+ GI L+NG           + + +I PK L+IA I D R W+W  VE +  R
Subjt:  LGLRTQFGHCLSHILPQSDDKIL-YPSYILLFEQLLFGINLNNG-----------AQAMYIPPKALTIALIHDPRQWQWIPVEYYENR

TrEMBL top hitse value%identityAlignment
A0A0A0LVN2 Phloem protein8.4e-0736.47Show/hide
Query:  LGLRTQFGHCLSHILPQS-DDKILYPSYILLFEQLLFGINLNNGAQAMY-----------IPPKALTIALIHDPRQWQWIPVEYY
        L ++  +GHCL++ILP++ +  + +P+Y  L++QL+ GI LN G +  +           + PK+LTI  I D + W+WIP E Y
Subjt:  LGLRTQFGHCLSHILPQS-DDKILYPSYILLFEQLLFGINLNNGAQAMY-----------IPPKALTIALIHDPRQWQWIPVEYY

Q8LK13 26 kDa phloem protein8.4e-0736.47Show/hide
Query:  LGLRTQFGHCLSHILPQS-DDKILYPSYILLFEQLLFGINLNNGAQAMY-----------IPPKALTIALIHDPRQWQWIPVEYY
        L ++  +GHCL++ILP++ +  + +P+Y  L++QL+ GI LN G +  +           + PK+LTI  I D + W+WIP E Y
Subjt:  LGLRTQFGHCLSHILPQS-DDKILYPSYILLFEQLLFGINLNNGAQAMY-----------IPPKALTIALIHDPRQWQWIPVEYY

Q8LK67 Phloem lectin8.4e-0741.11Show/hide
Query:  MNPEEIEAIIKYLGLRTQFGHCLSHILPQSDDKILYPSYILLFEQLLFGINLNNGA-----------QAMYIPPKALTIALIHDPRQWQW
        MN +E EA  K LG   + GHCL  IL  +D  + YPS++ L++QL+ GI LN GA              +I  +AL+IA I D R W+W
Subjt:  MNPEEIEAIIKYLGLRTQFGHCLSHILPQSDDKILYPSYILLFEQLLFGINLNNGA-----------QAMYIPPKALTIALIHDPRQWQW

Q8LK68 26 kDa phloem lectin (Fragment)8.4e-0736.14Show/hide
Query:  LRTQFGHCLSHILPQS-DDKILYPSYILLFEQLLFGINLNNGAQAMY-----------IPPKALTIALIHDPRQWQWIPVEYY
        ++  +GHCL++ILP++ +  + +P+Y  L++QL+ GI LN G +  +           + PK+LTI+ I D + W+WIP E Y
Subjt:  LRTQFGHCLSHILPQS-DDKILYPSYILLFEQLLFGINLNNGAQAMY-----------IPPKALTIALIHDPRQWQWIPVEYY

Q8LK97 26 kDa phloem lectin1.2e-0842.17Show/hide
Query:  LGLRTQFGHCLSHILPQSDDKIL-YPSYILLFEQLLFGINLNNGAQ-----------AMYIPPKALTIALIHDPRQWQWIPVE
        L ++ +FGHCLS+ILP + + ++ +PSY  L++QL  GI LNNG +             ++ PK+L+IA I D R W+WI VE
Subjt:  LGLRTQFGHCLSHILPQSDDKIL-YPSYILLFEQLLFGINLNNGAQ-----------AMYIPPKALTIALIHDPRQWQWIPVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCCGAAGAGATTGAAGCAATAATAAAGTATTTAGGATTAAGAACGCAATTTGGCCATTGCTTATCTCATATTTTACCGCAGTCAGACGACAAAATACTGTACCC
ATCTTACATTCTGCTTTTTGAACAACTTCTTTTCGGGATCAACTTGAACAATGGAGCTCAGGCAATGTATATACCACCCAAAGCTCTCACAATAGCTTTGATTCATGATC
CCCGACAATGGCAATGGATACCCGTTGAATATTATGAGAATAGA
mRNA sequenceShow/hide mRNA sequence
CCTCAAAATGAACCCCGAAGAGATTGAAGCAATAATAAAGTATTTAGGATTAAGAACGCAATTTGGCCATTGCTTATCTCATATTTTACCGCAGTCAGACGACAAAATAC
TGTACCCATCTTACATTCTGCTTTTTGAACAACTTCTTTTCGGGATCAACTTGAACAATGGAGCTCAGGCAATGTATATACCACCCAAAGCTCTCACAATAGCTTTGATT
CATGATCCCCGACAATGGCAATGGATACCCGTTGAATATTATGAGAATAGA
Protein sequenceShow/hide protein sequence
MNPEEIEAIIKYLGLRTQFGHCLSHILPQSDDKILYPSYILLFEQLLFGINLNNGAQAMYIPPKALTIALIHDPRQWQWIPVEYYENR