CuGenDBv2

Gene ID	CaUC01G009760
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	Ciama_Chr01:13130510..13130914
RNA-Seq Expression	CaUC01G009760
Synteny	CaUC01G009760
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

PHT27330.1 Photosystem I chlorophyll a apoprotein A2 [Capsicum baccatum]

1.7e-69

97.76

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

QBK38981.1 photosystem I P700 chlorophyll a apoprotein A2 [Schima superba]

6.4e-69

97.01

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

QTW91178.1 photosystem I P700 apoprotein A2 [Bryocarpum himalaicum]

6.4e-69

97.01

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

YP_009571515.1 photosystem I P700 apoprotein A2 [Mirabilis jalapa]

6.4e-69

97.01

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

YP_009945416.1 photosystem I P700 apoprotein A2 [Sechium edule]

6.4e-69

97.01

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

TrEMBL top hits

e value

%identity

Alignment

A0A0K1Z9H8 Photosystem I P700 chlorophyll a apoprotein A2

3.1e-69

97.01

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

A0A218KG43 Photosystem I P700 chlorophyll a apoprotein A2

3.1e-69

97.01

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

A0A221HRZ1 Photosystem I P700 chlorophyll a apoprotein A2

3.1e-69

97.01

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

A0A2G2V2W6 Photosystem I chlorophyll a apoprotein A2

8.1e-70

97.76

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

U3R6G8 Photosystem I P700 chlorophyll a apoprotein A2

3.1e-69

97.01

Show/hide

Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

SwissProt top hits

e value

%identity

Alignment

A0A334 Photosystem I P700 chlorophyll a apoprotein A2

8.4e-72

97.01

Show/hide

Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

P06512 Photosystem I P700 chlorophyll a apoprotein A2

8.4e-72

97.01

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

P56767 Photosystem I P700 chlorophyll a apoprotein A2

1.1e-71

96.27

Show/hide

Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNA+NENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

Q4VZN4 Photosystem I P700 chlorophyll a apoprotein A2

8.4e-72

97.01

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Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

Q8S8X5 Photosystem I P700 chlorophyll a apoprotein A2

8.4e-72

97.01

Show/hide

Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNAVNENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

7.8e-73

96.27

Show/hide

Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL
        MLDHKEAIISHLSWA+LFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHG+TSYGFDVLLSSTSGP FNAGRSIWLPGWLNA+NENSNSLFL
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFL

Query:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
        TIGPGDFLVHHAIALGLHTTT ILVKGALDARGS
Subjt:  TIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

ATCG00350.1 Photosystem I, PsaA/PsaB protein

1.3e-24

43.57

Show/hide

Query:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQ-----ILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSI-WLPGWLNAVNEN
        +L H++AIISHL+W  +FLGFH+ GLY+HND M A G P+       I ++P+FAQWIQ+ H         L    + P   A  S+ W  G L AV   
Subjt:  MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQ-----ILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSI-WLPGWLNAVNEN

Query:  SNSLFLTIGPGDFLVHHAIALGLHTTTSILVKGALDARGS
           L + +G  DFLVHH  A  +H T  IL+KG L AR S
Subjt:  SNSLFLTIGPGDFLVHHAIALGLHTTTSILVKGALDARGS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGGCCAACCTTTTTCTGGGGTTCCATACTTTGGGGCTTTATGTTCATAATGATGTCATGCTTGCTTTTGG
TACTCCGGAAAAACAAATCTTAATCGAACCGATATTTGCCCAATGGATTCAATCCGCTCATGGTCAAACTTCATATGGCTTCGATGTACTTTTATCTTCAACAAGCGGCC
CGACGTTCAATGCGGGTCGAAGCATATGGTTGCCAGGTTGGTTAAATGCTGTTAATGAGAATAGTAATTCACTATTCTTAACAATAGGTCCCGGAGACTTCTTGGTTCAT
CATGCTATTGCTTTAGGGTTACATACAACTACATCGATCTTAGTAAAAGGTGCTTTAGATGCACGTGGTTCCTAA

mRNA sequence

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Protein sequence

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MLDHKEAIISHLSWANLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGQTSYGFDVLLSSTSGPTFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVH
HAIALGLHTTTSILVKGALDARGS

CaUC01G009760 (gene) of Watermelon (USVL246-FR2) v1 genome