; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G010180 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G010180
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRibosomal protein S1
Genome locationCiama_Chr01:14386906..14393223
RNA-Seq ExpressionCaUC01G010180
SyntenyCaUC01G010180
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AKQ51070.1 ribosomal protein subunit S1 [Cuscuta gronovii]8.9e-0750.7Show/hide
Query:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSFFNHLISRRISNDRFNIESMNPQKNEYCGV
        FRQNRAW+ELNKIW+ NTK               +   F++F      +RISNDRF IESMNP  +EYCGV
Subjt:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSFFNHLISRRISNDRFNIESMNPQKNEYCGV

XP_030964986.1 uncharacterized protein LOC115986286 [Quercus lobata]2.0e-0649.4Show/hide
Query:  SLVVTAVKGLISKIVLFRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNIESMNPQK
        SL V A + L+     FRQNRAWMELNKIW+ NTK               +  SF++F  F  LI RRISNDRF IES+NP++
Subjt:  SLVVTAVKGLISKIVLFRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNIESMNPQK

YP_003587248.2 ribosomal protein S1 [Citrullus lanatus]7.3e-0953.66Show/hide
Query:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNI---ESMNPQKNEYCGVLRVVNR
        FRQNRAWMELNKIWQ NTK               +   F++F  F  LI +RISNDRF I   ES+NP  NEYCGVLRV ++
Subjt:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNI---ESMNPQKNEYCGVLRVVNR

YP_009676235.1 ribosomal protein S1 [Camellia sinensis]2.6e-0652.24Show/hide
Query:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNIESMNPQK
        FRQNRAWMELNKIW+ NTK               +   F++F  F  LIS+RISNDRF IES+NP++
Subjt:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNIESMNPQK

YP_009913648.1 ribosomal protein S1 [Luffa acutangula]1.2e-0652.31Show/hide
Query:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSFFNHLISRRISNDRFNIESMNPQK
        FRQNRAWMELNKIWQ NTK               +   F++F    IS+RISNDRF IES+NP++
Subjt:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSFFNHLISRRISNDRFNIESMNPQK

TrEMBL top hitse value%identityAlignment
A0A141BUL2 Ribosomal protein subunit S14.3e-0750.7Show/hide
Query:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSFFNHLISRRISNDRFNIESMNPQKNEYCGV
        FRQNRAW+ELNKIW+ NTK               +   F++F      +RISNDRF IESMNP  +EYCGV
Subjt:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSFFNHLISRRISNDRFNIESMNPQKNEYCGV

A0A142BZ25 Ribosomal protein S11.3e-0652.24Show/hide
Query:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNIESMNPQK
        FRQNRAWMELNKIW+ NTK               +   F++F  F  LIS+RISNDRF IES+NP++
Subjt:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNIESMNPQK

A0A4Y5WYS2 Ribosomal protein S11.3e-0652.24Show/hide
Query:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNIESMNPQK
        FRQNRAWMELNKIW+ NTK               +   F++F  F  LIS+RISNDRF IES+NP++
Subjt:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNIESMNPQK

A0A7D5Y132 Ribosomal protein S15.6e-0752.31Show/hide
Query:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSFFNHLISRRISNDRFNIESMNPQK
        FRQNRAWMELNKIWQ NTK               +   F++F    IS+RISNDRF IES+NP++
Subjt:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSFFNHLISRRISNDRFNIESMNPQK

D5I3B8 Ribosomal protein S13.5e-0953.66Show/hide
Query:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNI---ESMNPQKNEYCGVLRVVNR
        FRQNRAWMELNKIWQ NTK               +   F++F  F  LI +RISNDRF I   ES+NP  NEYCGVLRV ++
Subjt:  FRQNRAWMELNKIWQMNTK--------------TSWVSFLSF--FNHLISRRISNDRFNI---ESMNPQKNEYCGVLRVVNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCTATCATTGGTTGTTACAGCAGTGAAGGGTCTAATTAGTAAAATTGTGTTATTCAGACAAAACCGAGCTTGGATGGAACTAAACAAGATTTGGCAAATGAATAC
AAAAACATCATGGGTTTCATTTCTTTCTTTCTTCAATCATCTCATAAGTCGAAGGATATCGAATGATCGATTCAACATTGAGAGCATGAACCCCCAAAAGAACGAATATT
GTGGTGTTCTAAGAGTAGTGAACAGATGGGTATCAACTTCAATAGAGGAGCAGACAGATAAAAACTGGATACAAGAAAAATTCTCAGCCGTCCTTTTCAAGGACATTCTT
GTAGGAGATATTTCTCGAGAGAGTAGATTATTTACCAAACTTTTCTTGAAAGGTTCGAGCTCAGTTGTTGAAAGCAACTTCTCCTTTGTAACCAGATTAGGATACAAACT
AGTTAGAGCAGTCAACCGTGTACTCCCTCCATATATCTGCGAGCCTGCAACAAATATCTTTGTCTTGCGTTTGAAACCAAGAGCAGCAAGCATAAGTACAGCTTCCTCAG
GTGTCAAAGGACAAAGACCTTCTGACCTAAGTTCTGCAGGAGAAGGAATGGAAGGCAAAAAATCCAAATCTCCAGAGTCTAAAATAGACCTAGCGACAAAGTTCAGAAGT
CTAACTGAAAGGTTTAGTCCTCCAGAGGAAATGGACTGCTCGATATGCTTCCAACTCTTCTCTTTCTTCTTTGCCTCCACCAAATTCACAGAGAGAATGAGCTACCATAT
CAATTTCAAACCTCAAATGTACAGACAGGAACAAACCTCAGGGCATGAAAATTGCATCTGCATCGAAGTCTCTAGATGGAATTCCCAAATCAGGAAAACAAAATACAGAG
AAAGCAATATAACTAAGGAATATAAAAGGAGAGCAGTATCTATTGATTATAAAACACAAAAAACATACAAGAACAAGGACGTCCAGGACAACAGCATTGCAAACCTAGTT
CATGCAGGGAAAGGAACCATGATCAAAATGCAGCAACTAAGAGTAAAGATACTCTTCAAATCTAGTACTCACCGCTCGGCTCCCAATTGCGTTGATCAGCACATGGCTTC
CAAGCAGACGAAGCGACCATTGGCTCCTGCCACAAGTCCTTCGGCTCAGCCTTCCGTTTTCCCTGCAAGAAAGCAAATAATTGAACTCCAGCGTCCAGATATGAAATATG
AGAAATTGAGAGCAATTTCGAATCAACAATACATGCCTGAACTGAAATCCTTGAAGCAGACACATTCCCAGAATATCCAGGATTGGAATGGACTGCGTTATCCTCATTCT
CAAAAGCATGACCCAATTCACAAAGAAAAACAAGGCAACCAACAAAATCAAAAACAAAATCCCTTTGATTCGCTTCCTCTGGTACCACACTGTCCCCACCCTCTTCTTTA
CCCGCTTATCGACTTTAGATTTGTGCGAGCTATGATTCGACGGAAACCCAAAAAGCTTGACACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCTATCATTGGTTGTTACAGCAGTGAAGGGTCTAATTAGTAAAATTGTGTTATTCAGACAAAACCGAGCTTGGATGGAACTAAACAAGATTTGGCAAATGAATAC
AAAAACATCATGGGTTTCATTTCTTTCTTTCTTCAATCATCTCATAAGTCGAAGGATATCGAATGATCGATTCAACATTGAGAGCATGAACCCCCAAAAGAACGAATATT
GTGGTGTTCTAAGAGTAGTGAACAGATGGGTATCAACTTCAATAGAGGAGCAGACAGATAAAAACTGGATACAAGAAAAATTCTCAGCCGTCCTTTTCAAGGACATTCTT
GTAGGAGATATTTCTCGAGAGAGTAGATTATTTACCAAACTTTTCTTGAAAGGTTCGAGCTCAGTTGTTGAAAGCAACTTCTCCTTTGTAACCAGATTAGGATACAAACT
AGTTAGAGCAGTCAACCGTGTACTCCCTCCATATATCTGCGAGCCTGCAACAAATATCTTTGTCTTGCGTTTGAAACCAAGAGCAGCAAGCATAAGTACAGCTTCCTCAG
GTGTCAAAGGACAAAGACCTTCTGACCTAAGTTCTGCAGGAGAAGGAATGGAAGGCAAAAAATCCAAATCTCCAGAGTCTAAAATAGACCTAGCGACAAAGTTCAGAAGT
CTAACTGAAAGGTTTAGTCCTCCAGAGGAAATGGACTGCTCGATATGCTTCCAACTCTTCTCTTTCTTCTTTGCCTCCACCAAATTCACAGAGAGAATGAGCTACCATAT
CAATTTCAAACCTCAAATGTACAGACAGGAACAAACCTCAGGGCATGAAAATTGCATCTGCATCGAAGTCTCTAGATGGAATTCCCAAATCAGGAAAACAAAATACAGAG
AAAGCAATATAACTAAGGAATATAAAAGGAGAGCAGTATCTATTGATTATAAAACACAAAAAACATACAAGAACAAGGACGTCCAGGACAACAGCATTGCAAACCTAGTT
CATGCAGGGAAAGGAACCATGATCAAAATGCAGCAACTAAGAGTAAAGATACTCTTCAAATCTAGTACTCACCGCTCGGCTCCCAATTGCGTTGATCAGCACATGGCTTC
CAAGCAGACGAAGCGACCATTGGCTCCTGCCACAAGTCCTTCGGCTCAGCCTTCCGTTTTCCCTGCAAGAAAGCAAATAATTGAACTCCAGCGTCCAGATATGAAATATG
AGAAATTGAGAGCAATTTCGAATCAACAATACATGCCTGAACTGAAATCCTTGAAGCAGACACATTCCCAGAATATCCAGGATTGGAATGGACTGCGTTATCCTCATTCT
CAAAAGCATGACCCAATTCACAAAGAAAAACAAGGCAACCAACAAAATCAAAAACAAAATCCCTTTGATTCGCTTCCTCTGGTACCACACTGTCCCCACCCTCTTCTTTA
CCCGCTTATCGACTTTAGATTTGTGCGAGCTATGATTCGACGGAAACCCAAAAAGCTTGACACCTGA
Protein sequenceShow/hide protein sequence
MPLSLVVTAVKGLISKIVLFRQNRAWMELNKIWQMNTKTSWVSFLSFFNHLISRRISNDRFNIESMNPQKNEYCGVLRVVNRWVSTSIEEQTDKNWIQEKFSAVLFKDIL
VGDISRESRLFTKLFLKGSSSVVESNFSFVTRLGYKLVRAVNRVLPPYICEPATNIFVLRLKPRAASISTASSGVKGQRPSDLSSAGEGMEGKKSKSPESKIDLATKFRS
LTERFSPPEEMDCSICFQLFSFFFASTKFTERMSYHINFKPQMYRQEQTSGHENCICIEVSRWNSQIRKTKYRESNITKEYKRRAVSIDYKTQKTYKNKDVQDNSIANLV
HAGKGTMIKMQQLRVKILFKSSTHRSAPNCVDQHMASKQTKRPLAPATSPSAQPSVFPARKQIIELQRPDMKYEKLRAISNQQYMPELKSLKQTHSQNIQDWNGLRYPHS
QKHDPIHKEKQGNQQNQKQNPFDSLPLVPHCPHPLLYPLIDFRFVRAMIRRKPKKLDT