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CaUC01G010410 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G010410
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionS-protein homolog
Genome locationCiama_Chr01:15236379..15236717
RNA-Seq ExpressionCaUC01G010410
SyntenyCaUC01G010410
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646231.1 hypothetical protein Csa_023825, partial [Cucumis sativus]1.0e-4076.53Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDN-TNQKDVLIHKW
        LL HCKSKDNDLGE +L  G++FNWRF+VNFWNTTLFWCYLQKPNG HSSFE+FWIES SVWLY M ++ NCIW AKDDGIYL+DN    KD+LIHKW
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDN-TNQKDVLIHKW

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]1.2e-3667.01Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        L VHCKSKDNDLGEH L+ G++FNW F+VN WNTTLFWCYL KP+G  +SF+ FW+E  S+WL+   Y SNCIW AKDDGIYLRDN  Q+D+L+H+W
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]7.8e-3667.01Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        L VHCKSK++DLGEH LSVG++FNWRF+VN W+TTL+WCYLQKPNG   SF+AFW+E  S+WLY    +SNC W AKDDGIYLR+N + +DV +HKW
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]1.0e-4076.53Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDN-TNQKDVLIHKW
        LL HCKSKDNDLGE +L  G++FNWRF+VNFWNTTLFWCYLQKPNG HSSFE+FWIES SVWLY M ++ NCIW AKDDGIYL+DN    KD+LIHKW
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDN-TNQKDVLIHKW

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]1.2e-4786.6Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        L VHCKSKDNDLGEHKLSVG++FNWRF+VNFWNTTLFWCYLQKPN  HSSF+AFWIESTSVWLY+M YDSNCIWIAKDDG+YL+DNTN +DVLIHKW
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog2.4e-3565.31Show/hide
Query:  NLLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        NL VHC+SKD+DLG+  LSVG++FNW FK+NFW+TTLFWCYLQKPN    SFEAFW+E  S+WL+   + SNCIW AKDDGIYL+DN   +D L+H W
Subjt:  NLLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

A0A6J1CPR8 S-protein homolog3.8e-3667.01Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        L VHCKSK++DLGEH LSVG++FNWRF+VN W+TTL+WCYLQKPNG   SF+AFW+E  S+WLY    +SNC W AKDDGIYLR+N + +DV +HKW
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

A0A6J1CQH6 S-protein homolog1.9e-3261.86Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        L VHCKS+D+DLGE  L  G++F+W F+VN  +TTLFWC+L+KP+    SF+AFW+E TS+WL+   YD+NCIW AKDDG+YLRDN  Q+DVL+HKW
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

A0A6J1CRU0 S-protein homolog5.8e-3767.01Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        L VHCKSKDNDLGEH L+ G++FNW F+VN WNTTLFWCYL KP+G  +SF+ FW+E  S+WL+   Y SNCIW AKDDGIYLRDN  Q+D+L+H+W
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

A0A6J1HAC3 S-protein homolog5.8e-2956.7Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        + VHCKSKDNDLGEH L+ G++F W FKVNFW+TTLFWCYL+KPNG   +F+AFW+E  + WL      + C W A+D+GIYL+DN+   D  +H W
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 63.1e-1137.37Show/hide
Query:  VHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDS----NCIWIAKDDGIYLRDNTNQKDVLIHKW
        VHCKS+D+D G H L  G  + W F VNF N+TL++C   +       F+          +Y    DS    NC W AK+DGIY      +K+ L +KW
Subjt:  VHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDS----NCIWIAKDDGIYLRDNTNQKDVLIHKW

F4JLS0 S-protein homolog 12.6e-1844.33Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        L +HCKSK++DLGE  L   ++F+W F  N  ++T FWCY+ K NG H +   FW     V L+      NCIW AK DG+YL ++ + +DVL  KW
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

P0DN92 S-protein homolog 245.3e-1135.79Show/hide
Query:  VHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        +HCKS+D+DLG H L+ G  F W+F VNF  +TL++C   +       FE +          D +  +NC W A+ DGIY       K  L + W
Subjt:  VHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

Q2HQ46 S-protein homolog 747.6e-1843.3Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        L +HCKSK+NDLG+  L    +F+W F  N  ++TLFWCY+ K +G H + + FW     V L+      NC+W AK+DG+YL ++   +DVL  KW
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

Q9LW22 S-protein homolog 213.4e-1037.93Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNT
        L VHCKSK+ND+G   L +G   ++ FK NFW TT FWC L K             ++  ++  D    S+  W+A+DDGIY   ++
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNT

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family2.4e-1137.93Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNT
        L VHCKSK+ND+G   L +G   ++ FK NFW TT FWC L K             ++  ++  D    S+  W+A+DDGIY   ++
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNT

AT4G16295.1 S-protein homologue 11.9e-1944.33Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        L +HCKSK++DLGE  L   ++F+W F  N  ++T FWCY+ K NG H +   FW     V L+      NCIW AK DG+YL ++ + +DVL  KW
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

AT4G29035.1 Plant self-incompatibility protein S1 family5.4e-1943.3Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        L +HCKSK+NDLG+  L    +F+W F  N  ++TLFWCY+ K +G H + + FW     V L+      NC+W AK+DG+YL ++   +DVL  KW
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW

AT5G04350.1 Plant self-incompatibility protein S1 family8.4e-1239.08Show/hide
Query:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYL-QKPNGLHS----SFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIY
        L VHC+SKD+DLGEH L +G  + + F  N W TT F C + Q PN  H     ++E  W ++          +++C WI ++DGIY
Subjt:  LLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYL-QKPNGLHS----SFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIY

AT5G06020.1 Plant self-incompatibility protein S1 family2.4e-1135.79Show/hide
Query:  VHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW
        +HCKSKD+DLG H    G  + W+F VNF N+TL++C   +       F+    E       D +   NC W AK D +Y   N  Q      KW
Subjt:  VHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATCCATGTTGTGAATCGGCTAAGCAATGGCCAAACCTATTGGTTCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTCAATT
CAATTGGAGATTTAAAGTAAACTTTTGGAATACGACATTGTTTTGGTGTTACTTGCAGAAGCCAAATGGACTACATTCGTCGTTCGAAGCCTTTTGGATTGAGAGCACAT
CGGTTTGGCTCTATGATATGTTCTACGATTCTAACTGCATTTGGATAGCAAAAGATGATGGAATTTATTTGAGAGACAACACTAATCAAAAAGATGTTTTGATTCATAAG
TGGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATCCATGTTGTGAATCGGCTAAGCAATGGCCAAACCTATTGGTTCATTGCAAATCCAAAGACAATGATTTAGGAGAACACAAGCTTAGTGTTGGATCTCAATT
CAATTGGAGATTTAAAGTAAACTTTTGGAATACGACATTGTTTTGGTGTTACTTGCAGAAGCCAAATGGACTACATTCGTCGTTCGAAGCCTTTTGGATTGAGAGCACAT
CGGTTTGGCTCTATGATATGTTCTACGATTCTAACTGCATTTGGATAGCAAAAGATGATGGAATTTATTTGAGAGACAACACTAATCAAAAAGATGTTTTGATTCATAAG
TGGGCATAA
Protein sequenceShow/hide protein sequence
MADPCCESAKQWPNLLVHCKSKDNDLGEHKLSVGSQFNWRFKVNFWNTTLFWCYLQKPNGLHSSFEAFWIESTSVWLYDMFYDSNCIWIAKDDGIYLRDNTNQKDVLIHK
WA