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CaUC01G011680 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G011680
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A1
Genome locationCiama_Chr01:20062570..20062898
RNA-Seq ExpressionCaUC01G011680
SyntenyCaUC01G011680
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR001280 - Photosystem I PsaA/PsaB
IPR036408 - Photosystem I PsaA/PsaB superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032901.1 photosystem I P700 apoprotein A1 [Cucumis melo var. makuwa]4.1e-36100Show/hide
Query:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
KAF1855876.1 hypothetical protein Lal_00028295 [Lupinus albus]6.5e-3496.1Show/hide
Query:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        MGG AISYG +HPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
KAG5049440.1 hypothetical protein JHK85_010543 [Glycine max]8.5e-3494.81Show/hide
Query:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        MGG  ISY HRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRA+GVTHYLLGGIATTWAFFLARIIAVG
Subjt:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
RDY14672.1 Photosystem I P700 chlorophyll a apoprotein A1, partial [Mucuna pruriens]8.5e-3496.1Show/hide
Query:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        MGG  ISYG RHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
RZC16650.1 Photosystem I P700 chlorophyll a apoprotein A1, partial [Glycine soja]6.5e-3496.1Show/hide
Query:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        MGG  ISY HRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
TrEMBL top hitse value%identityAlignment
A0A371IHY8 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)4.1e-3496.1Show/hide
Query:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        MGG  ISYG RHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
A0A445L0K3 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment)3.2e-3496.1Show/hide
Query:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        MGG  ISY HRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
A0A5A7STQ0 Photosystem I P700 apoprotein A12.0e-36100Show/hide
Query:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
A0A6A5L8W7 Uncharacterized protein3.2e-3496.1Show/hide
Query:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        MGG AISYG +HPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
A0A6D2KNH8 Uncharacterized protein5.4e-3496.1Show/hide
Query:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        MGG AISYGH+H SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
SwissProt top hitse value%identityAlignment
A4QJB5 Photosystem I P700 chlorophyll a apoprotein A12.7e-30100Show/hide
Query:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
A4QJJ9 Photosystem I P700 chlorophyll a apoprotein A12.7e-30100Show/hide
Query:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
A4QK18 Photosystem I P700 chlorophyll a apoprotein A12.7e-30100Show/hide
Query:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Q3V534 Photosystem I P700 chlorophyll a apoprotein A12.7e-30100Show/hide
Query:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Q70Y03 Photosystem I P700 chlorophyll a apoprotein A12.7e-30100Show/hide
Query:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
Arabidopsis top hitse value%identityAlignment
ATCG00340.1 Photosystem I, PsaA/PsaB protein2.0e-0950Show/hide
Query:  SGRGYWQELIESIVWAHNKLKVAP----ATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLA
        S RGYWQELIE++ WAH +  +A       +P ALSIVQ R VG+ H+ +G I T  AF +A
Subjt:  SGRGYWQELIESIVWAHNKLKVAP----ATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLA
ATCG00350.1 Photosystem I, PsaA/PsaB protein2.5e-3198.44Show/hide
Query:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG
        SGRGYWQELIESIVWAHNKLKVAPATQPRALSI+QGRAVGVTHYLLGGIATTWAFFLARIIAVG
Subjt:  SGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCTTCGCGATTTCTTATGGGCACAGGCATCCCAGCGGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAAGTTGCTCC
TGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGAATTA
TTGCAGTCGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGCTTCGCGATTTCTTATGGGCACAGGCATCCCAGCGGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAAGTTGCTCC
TGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGAATTA
TTGCAGTCGGATAA
Protein sequenceShow/hide protein sequence
MGGFAISYGHRHPSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG