; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G011900 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G011900
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionProtein transport protein sec24
Genome locationCiama_Chr01:21514863..21516623
RNA-Seq ExpressionCaUC01G011900
SyntenyCaUC01G011900
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0007029 - endoplasmic reticulum organization (biological process)
GO:0007030 - Golgi organization (biological process)
GO:0008361 - regulation of cell size (biological process)
GO:0032876 - negative regulation of DNA endoreduplication (biological process)
GO:0048232 - male gamete generation (biological process)
GO:0080119 - ER body organization (biological process)
GO:0030127 - COPII vesicle coat (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035473.1 protein transport protein SEC24 [Cucumis melo var. makuwa]1.3e-0782.05Show/hide
Query:  WHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
        WHAPGFPI+QIAFQYTVVVPPEELSSS+SSSR  +  KR
Subjt:  WHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
TYK31051.1 protein transport protein sec24 [Cucumis melo var. makuwa]1.3e-0782.05Show/hide
Query:  WHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
        WHAPGFPI+QIAFQYTVVVPPEELSSS+SSSR  +  KR
Subjt:  WHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
XP_004139490.1 protein transport protein sec24 [Cucumis sativus]1.8e-0681.58Show/hide
Query:  HAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
        HAPGFPI+QIAFQYTVVVPPEELSSS+SSSR  +  KR
Subjt:  HAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
XP_008461390.1 PREDICTED: protein transport protein SEC24 [Cucumis melo]1.8e-0681.58Show/hide
Query:  HAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
        HAPGFPI+QIAFQYTVVVPPEELSSS+SSSR  +  KR
Subjt:  HAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
XP_038894285.1 protein transport protein sec24 [Benincasa hispida]8.1e-0781.58Show/hide
Query:  HAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
        HAPGFPI+QIAFQYTVVVPPEELSSS+SSSR  +  KR
Subjt:  HAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
TrEMBL top hitse value%identityAlignment
A0A0A0LVF2 Sec23_helical domain-containing protein7.9e-0878.57Show/hide
Query:  IVCWHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
        I+C HAPGFPI+QIAFQYTVVVPPEELSSS+SSSR  +  KR
Subjt:  IVCWHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
A0A1S3CEA2 protein transport protein SEC248.8e-0781.58Show/hide
Query:  HAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
        HAPGFPI+QIAFQYTVVVPPEELSSS+SSSR  +  KR
Subjt:  HAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
A0A5A7SY28 Protein transport protein SEC246.1e-0882.05Show/hide
Query:  WHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
        WHAPGFPI+QIAFQYTVVVPPEELSSS+SSSR  +  KR
Subjt:  WHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
A0A5D3E625 Protein transport protein sec246.1e-0882.05Show/hide
Query:  WHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
        WHAPGFPI+QIAFQYTVVVPPEELSSS+SSSR  +  KR
Subjt:  WHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
A0A6J1HVN4 protein transport protein sec241.5e-0681.58Show/hide
Query:  HAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
        HAPG PI+QIAFQYTVVVPPEELSSSVSSSR  +  KR
Subjt:  HAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRYKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27460.1 sec23/sec24 transport family protein6.9e-0466.67Show/hide
Query:  HAPGFPILQIAFQYTVVVPPEELSSSVSSS
        H+   P++QIAFQYTVVVPPE LS+S  SS
Subjt:  HAPGFPILQIAFQYTVVVPPEELSSSVSSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTTTGTACTGCTGTGGGGACCATGGGAGTGAGAGTAGGGGCTGGGGGAAATCAGTGTTGGTGTGGAGAATTTTGGCTGAGGCTAAAGGTGGAGAGAATTCCAGC
ACTCTCAAAATTGCTGGAGAAGTTATCTTTGTTCTTGTTATCTACTTCCACTTTGTTTTGCGTTGCTGAACTTGAGTCTTCTGTTTTCTTGTATTCAGACATTGTGTGTT
GGCACGCTCCTGGGTTCCCCATTCTGCAGATTGCTTTCCAATATACTGTTGTTGTGCCTCCCGAAGAGCTTTCTAGTTCTGTTTCATCTAGTAGGTATATCTACAGATAC
AAAAGACTTTCGATTTTAAGTTTTCCTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTTTGTACTGCTGTGGGGACCATGGGAGTGAGAGTAGGGGCTGGGGGAAATCAGTGTTGGTGTGGAGAATTTTGGCTGAGGCTAAAGGTGGAGAGAATTCCAGC
ACTCTCAAAATTGCTGGAGAAGTTATCTTTGTTCTTGTTATCTACTTCCACTTTGTTTTGCGTTGCTGAACTTGAGTCTTCTGTTTTCTTGTATTCAGACATTGTGTGTT
GGCACGCTCCTGGGTTCCCCATTCTGCAGATTGCTTTCCAATATACTGTTGTTGTGCCTCCCGAAGAGCTTTCTAGTTCTGTTTCATCTAGTAGGTATATCTACAGATAC
AAAAGACTTTCGATTTTAAGTTTTCCTTCTTAG
Protein sequenceShow/hide protein sequence
MVVCTAVGTMGVRVGAGGNQCWCGEFWLRLKVERIPALSKLLEKLSLFLLSTSTLFCVAELESSVFLYSDIVCWHAPGFPILQIAFQYTVVVPPEELSSSVSSSRYIYRY
KRLSILSFPS