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CaUC01G011930 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G011930
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionphotosystem I subunit O
Genome locationCiama_Chr01:21737004..21740809
RNA-Seq ExpressionCaUC01G011930
SyntenyCaUC01G011930
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR017498 - Photosystem I PsaO


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139499.1 photosystem I subunit O [Cucumis sativus]1.2e-6890.48Show/hide
Query:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
        MA AFAT SSV GLGT+SLSSPSSR+PRLVSGF++ P+AARNPL+VA ASGG+FTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGA
Subjt:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

XP_008463649.1 PREDICTED: photosystem I subunit O [Cucumis melo]9.2e-6991.16Show/hide
Query:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
        MA AFAT SSV GLGT+SLSSPSSR+PRLVSGF++SP+AARNPL V RAS GRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG 
Subjt:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

XP_022142590.1 photosystem I subunit O [Momordica charantia]3.1e-6990.54Show/hide
Query:  MAAAFATSSSVVGLG-TSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG
        MA AFATSS++VGLG +SSLSSPSSR+PRL S FV+SP AARNPL+VARASGGRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVINGKSLTGLFFESIG
Subjt:  MAAAFATSSSVVGLG-TSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWL+TWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

XP_022973174.1 photosystem I subunit O [Cucurbita maxima]4.1e-6989.12Show/hide
Query:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
        MA+AFATSSSVVGLG+SSLSSPSSR+PRLVSGF++ P+ ARNP  VAR+ GGRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGA
Subjt:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

XP_038895620.1 photosystem I subunit O [Benincasa hispida]5.2e-7293.88Show/hide
Query:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
        MA AFATSSSVVGLGT+SLSSPSSR+PRLVSGFV+ P+ ARNP AVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
Subjt:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

TrEMBL top hitse value%identityAlignment
A0A0A0LT61 Uncharacterized protein5.8e-6990.48Show/hide
Query:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
        MA AFAT SSV GLGT+SLSSPSSR+PRLVSGF++ P+AARNPL+VA ASGG+FTCFERDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGA
Subjt:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

A0A1S3CJR4 photosystem I subunit O4.4e-6991.16Show/hide
Query:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
        MA AFAT SSV GLGT+SLSSPSSR+PRLVSGF++SP+AARNPL V RAS GRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG 
Subjt:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

A0A6J1CLD0 photosystem I subunit O1.5e-6990.54Show/hide
Query:  MAAAFATSSSVVGLG-TSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG
        MA AFATSS++VGLG +SSLSSPSSR+PRL S FV+SP AARNPL+VARASGGRFTCFERDWLRRDLNVIGFGLIGW+APSSIPVINGKSLTGLFFESIG
Subjt:  MAAAFATSSSVVGLG-TSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIG

Query:  AELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        AELAHFPSPPALTSQFWLWL+TWHLGLFI LTFGQIGFKGRTEDYFSK
Subjt:  AELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

A0A6J1EID2 photosystem I subunit O7.1e-6787.07Show/hide
Query:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
        MA+AFATSSSVVGLG+SSLSSPSSR+PRLVS FV+ P+ ARNP  V R+ GGR TCF+RDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIG 
Subjt:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

A0A6J1IDS7 photosystem I subunit O2.0e-6989.12Show/hide
Query:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
        MA+AFATSSSVVGLG+SSLSSPSSR+PRLVSGF++ P+ ARNP  VAR+ GGRFTCF+RDWLRRDLNVIGFGLIGWIAPSSIPVI+GKSLTGLFFESIGA
Subjt:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK
        ELAHFPSPPALTSQFWLWLITWHLGLFI LTFGQIGFKGRTEDYF K
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK

SwissProt top hitse value%identityAlignment
Q949Q5 Photosystem I subunit O4.4e-5874.48Show/hide
Query:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
        MAA FAT S+V+GLG SS++     T    S F++  L+A+NPL +A ASGGR TCFER+WLRRDLNV+GFGLIGW+APSSIP INGKSLTGLFF+SIG 
Subjt:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYF
        ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYF

Arabidopsis top hitse value%identityAlignment
AT1G08380.1 photosystem I subunit O3.1e-5974.48Show/hide
Query:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA
        MAA FAT S+V+GLG SS++     T    S F++  L+A+NPL +A ASGGR TCFER+WLRRDLNV+GFGLIGW+APSSIP INGKSLTGLFF+SIG 
Subjt:  MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGA

Query:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYF
        ELAHFP+PPALTSQFWLWL+TWHLGLF+ LTFGQIGFKGRTEDYF
Subjt:  ELAHFPSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGTCTCGGAACCTCCTCCCTTTCTTCTCCTTCCTCCAGAACTCCCCGTCTCGTCTCCGGGTTCGTCAGG
TCACCGCTCGCCGCCAGGAATCCGCTCGCTGTGGCACGTGCATCCGGCGGAAGATTCACCTGCTTTGAGAGAGATTGGCTGCGGAGAGATCTGAATGTGATCGGA
TTTGGACTGATCGGGTGGATTGCGCCATCGAGCATTCCGGTAATCAATGGGAAGAGCTTGACGGGACTATTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTT
CCTTCTCCACCTGCCCTCACTTCTCAGTTCTGGTTGTGGCTTATTACGTGGCACTTGGGCCTCTTCATAATGCTTACCTTCGGACAAATCGGGTTCAAGGGGAGG
ACCGAAGACTATTTTTCAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATCTGAACGTCCCACCACCACACACCACAAATAATTGTTTTTGTTTGATGAAAAATACTTTGATACATAAGTAGAAAACGGCCCACTTTATCCAAAAAATTCCGA
GGTGTCAAAGCTTGATTCATCAGAAATTGATTCACTATCCAAAGCAATCAAATCCACAATCCCCAAAATCTCATCCACACAAATTTCCCAACAAAATCCCAACCT
CTTTCCCTCACTTCTACAAAACAACCGCACCACCCAAGCTCTGATCCGCACCAATCCTCTCAAAAAATGGCCGCCGCCTTCGCTACCTCCTCCTCCGTCGTCGGT
CTCGGAACCTCCTCCCTTTCTTCTCCTTCCTCCAGAACTCCCCGTCTCGTCTCCGGGTTCGTCAGGTCACCGCTCGCCGCCAGGAATCCGCTCGCTGTGGCACGT
GCATCCGGCGGAAGATTCACCTGCTTTGAGAGAGATTGGCTGCGGAGAGATCTGAATGTGATCGGATTTGGACTGATCGGGTGGATTGCGCCATCGAGCATTCCG
GTAATCAATGGGAAGAGCTTGACGGGACTATTCTTTGAGAGCATTGGAGCAGAGCTTGCGCATTTTCCTTCTCCACCTGCCCTCACTTCTCAGTTCTGGTTGTGG
CTTATTACGTGGCACTTGGGCCTCTTCATAATGCTTACCTTCGGACAAATCGGGTTCAAGGGGAGGACCGAAGACTATTTTTCAAAGTGAAAATGTAATAATTCT
TAAAAAGGAGAGGGAATTCTAGTATTTATTATTCATGTTTATAAGTTATAAGTAGTGTTTGTGGCCATCATTTTCTTCATGTAAATCGCAACCTCCAAATCTTGG
TATAACCTTGTGTTTATTAATGAAATGCCGCCTCGCTAATCCTACTCAACTCAGTTGATTTGAACTATTAAGTTCAAAGGAAAAGTGATAAGTAACACTCGAGGA
CATGTGATATGAACGGAGGAACTTTAAACATGCAATATGAACATAAAAAATGAGCCATACATGCTGTCCAAGTTTACACTAAGCAAAGAAGAAGAATTATATGAA
GTCAAGTGGAATTTATGAAGAATGAAGCTTCATTTAATGAACAAAGACTTCAAGCTACTTCAAATGGGATGTCATTTACTCTTAGATGGTTACAAATGCATGAAA
TATGGTTGAAAAATATTAATCTCGGATTTATTGTATTTATTAAATGTATTTTTCAGTTTTGAGTCATTTTATGTGATTTTATGTTACAATTTCATCATGGCTTAT
AATGGTCATTAATTATGAGTGTTATAACTCTTTGAATGCCTCATAGAATGTTTAAGGTTAGATTTTGAGACCTATATAATCCCATGTAATTATTTAAAAATGAGA
GATGGAAGAGATTTGAAAATGTAGTAAAAGAGCCTTTGAGCTTTCTTTAAGCCTTGTGCTATGTTTCTTTTGCGATTCTATGGTGTTTAGGTTGCATGTCCAAAA
CCATGCAAACTTGACTTGATCGATCTTGTTTGTGGAGTGGTTCGAAGATCAAGGATCAATGGGAGCATGAAGCTTTGTTCGATCCGTGGTTTTGTTGATCGTCTA
AGTAATGACCATTATAAGTAACACTCGAGGACTCTGATACCAAATAATAAGTAACACTCAACGACTTAGATTTAACAACCTTGTCGACAAACAAGACTTTTAGAT
CTCAAAATCAAACACTCGAAATTAAGATGATCTCAGCCTCTATGAATGATTAGATGACG
Protein sequenceShow/hide protein sequence
MAAAFATSSSVVGLGTSSLSSPSSRTPRLVSGFVRSPLAARNPLAVARASGGRFTCFERDWLRRDLNVIGFGLIGWIAPSSIPVINGKSLTGLFFESIGAELAHF
PSPPALTSQFWLWLITWHLGLFIMLTFGQIGFKGRTEDYFSK