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CaUC01G012010 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G012010
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCASP-like protein
Genome locationCiama_Chr01:22193865..22194580
RNA-Seq ExpressionCaUC01G012010
SyntenyCaUC01G012010
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652815.1 hypothetical protein Csa_023994, partial [Cucumis sativus]1.7e-2387.69Show/hide
Query:  PTFRAFFSSSLELWKRLSDHFRKSFCKEQQKELGWKNIFCRGLGVTAPKARTRDKPMSTALFFTL
        PTFRAFFSSSL+LWKR SDHFRKSFCKEQQ+ELGW NIF RGLGVTAPKARTRDKPM TA F TL
Subjt:  PTFRAFFSSSLELWKRLSDHFRKSFCKEQQKELGWKNIFCRGLGVTAPKARTRDKPMSTALFFTL

KAF5470938.1 hypothetical protein F2P56_011422, partial [Juglans regia]1.7e-0460.98Show/hide
Query:  FRKSFCKEQQKELGWKNIFCRGLGVTAPKARTRDKPMSTAL
        FR+SF +E+ K LGWK  F +G+GVT PKARTRDKP++  L
Subjt:  FRKSFCKEQQKELGWKNIFCRGLGVTAPKARTRDKPMSTAL

KAG6583714.1 hypothetical protein SDJN03_19646, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2284.62Show/hide
Query:  PTFRAFFSSSLELWKRLSDHFRKSFCKEQQKELGWKNIFCRGLGVTAPKARTRDKPMSTALFFTL
        PTFR FF SSL+LW RLSDHFRKSFCKE QKELGWKNIFCRGLGVTAPKARTRDKPM    F TL
Subjt:  PTFRAFFSSSLELWKRLSDHFRKSFCKEQQKELGWKNIFCRGLGVTAPKARTRDKPMSTALFFTL

KAG7019361.1 hypothetical protein SDJN02_18321 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-1885.71Show/hide
Query:  SLELWKRLSDHFRKSFCKEQQKELGWKNIFCRGLGVTAPKARTRDKPMSTALFFTL
        SL+LW RLSDHFRKSFCKE QKELGWKNIFCRGLGVTAPKARTRDKPM    F TL
Subjt:  SLELWKRLSDHFRKSFCKEQQKELGWKNIFCRGLGVTAPKARTRDKPMSTALFFTL

TKR98526.1 Casparian strip membrane protein [Populus alba]2.0e-0557.89Show/hide
Query:  SSSLELW----KRLSDHFRKSF-CKEQQ-KELGWKNIFCRGLGVTAPKARTRDKPMS
        S SL  W    K L   FRKSF C  ++   LGWKN F  G+G+TAPKARTRDKPMS
Subjt:  SSSLELW----KRLSDHFRKSF-CKEQQ-KELGWKNIFCRGLGVTAPKARTRDKPMS

TrEMBL top hitse value%identityAlignment
A0A4U5PQ38 CASP-like protein9.8e-0657.89Show/hide
Query:  SSSLELW----KRLSDHFRKSF-CKEQQ-KELGWKNIFCRGLGVTAPKARTRDKPMS
        S SL  W    K L   FRKSF C  ++   LGWKN F  G+G+TAPKARTRDKPMS
Subjt:  SSSLELW----KRLSDHFRKSF-CKEQQ-KELGWKNIFCRGLGVTAPKARTRDKPMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAAGGGTGTTGTTTGCAATTTACCCTAATAGTAATACTGTTAGAGCTAGCCCCCAAGTTAGTTTTCCCTCTTTCGGATCCAACATTCCGGGCTTTCTTCTCCTC
CAGCTTGGAATTGTGGAAGCGCCTCTCTGATCATTTCCGGAAATCGTTTTGCAAGGAGCAGCAGAAGGAGCTGGGCTGGAAGAATATTTTCTGCCGAGGGTTGGGTGTCA
CTGCTCCCAAAGCAAGAACTCGTGACAAACCCATGTCTACTGCCTTGTTCTTCACTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAAGGGTGTTGTTTGCAATTTACCCTAATAGTAATACTGTTAGAGCTAGCCCCCAAGTTAGTTTTCCCTCTTTCGGATCCAACATTCCGGGCTTTCTTCTCCTC
CAGCTTGGAATTGTGGAAGCGCCTCTCTGATCATTTCCGGAAATCGTTTTGCAAGGAGCAGCAGAAGGAGCTGGGCTGGAAGAATATTTTCTGCCGAGGGTTGGGTGTCA
CTGCTCCCAAAGCAAGAACTCGTGACAAACCCATGTCTACTGCCTTGTTCTTCACTCTCTGA
Protein sequenceShow/hide protein sequence
MVEGCCLQFTLIVILLELAPKLVFPLSDPTFRAFFSSSLELWKRLSDHFRKSFCKEQQKELGWKNIFCRGLGVTAPKARTRDKPMSTALFFTL