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CaUC01G013590 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G013590
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCytochrome c oxidase assembly protein
Genome locationCiama_Chr01:26567827..26570526
RNA-Seq ExpressionCaUC01G013590
SyntenyCaUC01G013590
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5531961.1 hypothetical protein DKX38_018631 [Salix brachista]3.4e-1477.19Show/hide
Query:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHDDVGNILK
        MG AS+AGDW FKAFTASLGVATIYL ATFS NVYRGLSWH AQS+ +H  V +ILK
Subjt:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHDDVGNILK
KAF4352552.1 hypothetical protein F8388_012248 [Cannabis sativa]1.3e-1391.11Show/hide
Query:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQS
        MG ASKAGDWAFKAFTASLGVAT+YLTATFSVNVY+GL+WHKAQS
Subjt:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQS
KAF4376112.1 hypothetical protein G4B88_025203 [Cannabis sativa]3.4e-1479.63Show/hide
Query:  RRNVEVSVKMGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQS
        R  +E   +MG ASKAGDWAFKAFTASLGVAT+YLTATFSVNVY+GL+WHKAQS
Subjt:  RRNVEVSVKMGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQS
KGN64278.1 hypothetical protein Csa_014049 [Cucumis sativus]3.1e-1588.24Show/hide
Query:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHDD
        MGAASKAGDWAFKAFTA LGVATIYLTATFSVNVYRGLSWHKAQS + +D+
Subjt:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHDD
PSR96666.1 Cytochrome c oxidase assembly protein [Actinidia chinensis var. chinensis]2.2e-1384Show/hide
Query:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHD
        MG ASKAGDWAFKAFTA LGVATIYL ATFSVNVYRGLSWH AQS +  D
Subjt:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHD
TrEMBL top hitse value%identityAlignment
A0A0A0LR55 Uncharacterized protein1.5e-1588.24Show/hide
Query:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHDD
        MGAASKAGDWAFKAFTA LGVATIYLTATFSVNVYRGLSWHKAQS + +D+
Subjt:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHDD
A0A2R6PUD2 Cytochrome c oxidase assembly protein1.1e-1384Show/hide
Query:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHD
        MG ASKAGDWAFKAFTA LGVATIYL ATFSVNVYRGLSWH AQS +  D
Subjt:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHD
A0A5N5KNP1 Uncharacterized protein1.6e-1477.19Show/hide
Query:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHDDVGNILK
        MG AS+AGDW FKAFTASLGVATIYL ATFS NVYRGLSWH AQS+ +H  V +ILK
Subjt:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQSLLVHDDVGNILK
A0A7J6E2E7 Uncharacterized protein6.2e-1491.11Show/hide
Query:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQS
        MG ASKAGDWAFKAFTASLGVAT+YLTATFSVNVY+GL+WHKAQS
Subjt:  MGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQS
A0A7J6G025 Uncharacterized protein1.6e-1479.63Show/hide
Query:  RRNVEVSVKMGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQS
        R  +E   +MG ASKAGDWAFKAFTASLGVAT+YLTATFSVNVY+GL+WHKAQS
Subjt:  RRNVEVSVKMGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLSWHKAQS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCACAGAACAGCAATTGGCAAAGAAAAACCCTTCGTTTGGGAATCAGAACGACGTCGCTGCAAGGGTTTTTTGCATTTCTTCTATGCAAATCAAGGTCT
GTTCTTCTCTGGAGCGGTGAGGTCGGTGACGATCAAAGCTTAGCTGAAAGTTCCAACGGCGGAGAACGGAGAAACGTTGAAGTCTCGGTGAAAATGGGAGCAGCG
AGTAAAGCGGGCGATTGGGCGTTCAAGGCCTTTACTGCCAGTCTCGGTGTCGCCACCATTTATCTCACTGCTACCTTCTCAGTCAACGTCTACAGAGGATTGTCA
TGGCACAAAGCTCAATCCCTTTTGGTTCATGATGATGTGGGAAACATATTGAAGTGGAGTACCGACGATTACGGTGGAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCACAGAACAGCAATTGGCAAAGAAAAACCCTTCGTTTGGGAATCAGAACGACGTCGCTGCAAGGGTTTTTTGCATTTCTTCTATGCAAATCAAGGTCT
GTTCTTCTCTGGAGCGGTGAGGTCGGTGACGATCAAAGCTTAGCTGAAAGTTCCAACGGCGGAGAACGGAGAAACGTTGAAGTCTCGGTGAAAATGGGAGCAGCG
AGTAAAGCGGGCGATTGGGCGTTCAAGGCCTTTACTGCCAGTCTCGGTGTCGCCACCATTTATCTCACTGCTACCTTCTCAGTCAACGTCTACAGAGGATTGTCA
TGGCACAAAGCTCAATCCCTTTTGGTTCATGATGATGTGGGAAACATATTGAAGTGGAGTACCGACGATTACGGTGGAAGCTGATTCCTCCTAACAGTTTATTCG
ATACTTCATTGGTATTTAGCATATTCAAGATTACAAGTTCTGCAAAATATTTGCATCATGATACCTCTTGAAGGGCTAAAACGGTTATGGCTTCTTTTTGTGCAG
AAAATCAACCACGACAATACGAATGAAGAGGCTACATAA
Protein sequenceShow/hide protein sequence
MASQNSNWQRKTLRLGIRTTSLQGFFAFLLCKSRSVLLWSGEVGDDQSLAESSNGGERRNVEVSVKMGAASKAGDWAFKAFTASLGVATIYLTATFSVNVYRGLS
WHKAQSLLVHDDVGNILKWSTDDYGGS