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CaUC01G013880 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G013880
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionprotein PXR1
Genome locationCiama_Chr01:26821436..26821726
RNA-Seq ExpressionCaUC01G013880
SyntenyCaUC01G013880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584261.1 hypothetical protein SDJN03_20193, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1471.29Show/hide
Query:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKE--------KKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAP
        MG TSEEK E KVEK K++KKDKEKH EEEED+D  KK+ K+        K+KK+K+PAD KDP KLRQKLEKLEAKMQALAVKKEEILKL+HEAE NA 
Subjt:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKE--------KKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAP

Query:  P
        P
Subjt:  P
KAG7019857.1 hypothetical protein SDJN02_18822, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-1371.84Show/hide
Query:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDED---------EKKKEKKEKK-KKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHN
        MG TSEEK E KVEK K++KKDKEKH EEEE+ED         +K KE+ EKK KK+K+PAD KDP KLRQKLEKLEAKMQALAVKKEEILKL+HEAE N
Subjt:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDED---------EKKKEKKEKK-KKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHN

Query:  APP
        A P
Subjt:  APP
XP_008437610.1 PREDICTED: protein PXR1 [Cucumis melo]7.4e-1980Show/hide
Query:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPS
        MGETSEEK E KV  EKKEKKDKEKHGE E++E       K+KKKKEK PADKKDP+KLRQKLEKLEAKMQALAVKKEEILKLLHEAE N PPPS
Subjt:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPS
XP_022137487.1 nucleolar protein 58 [Momordica charantia]7.9e-1371.57Show/hide
Query:  MGETSEEKQESK--VEKEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNA----PPP
        MGE SEEK E +   +KEKKEKKDKEKH E E  E EKKKEKKEKKK  K P DKKDP+KLRQKLEKLE KM+ LA+KKEE+LKLL EAE NA    PPP
Subjt:  MGETSEEKQESK--VEKEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNA----PPP

Query:  SS
        SS
Subjt:  SS
XP_022923831.1 protein PXR1 [Cucurbita moschata]5.1e-1268.32Show/hide
Query:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKE--------KKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAP
        MG TSEEK E KVEK K++KKDKEKH EEE+D  +KK + K+        K+KK+K+PAD KDP KLRQKLEKLE KMQALAVKKEEILKL+HEAE NA 
Subjt:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKE--------KKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAP

Query:  P
        P
Subjt:  P
TrEMBL top hitse value%identityAlignment
A0A0A0LQQ8 Uncharacterized protein5.5e-2083.51Show/hide
Query:  MGETSEEKQESKVE-KEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPSS
        MGETSEEK E +VE KEKKEKKDKEKHGEE EDE     EKK+KKKKEK+PADKKDP+KLRQKLEKLE KMQALAVKKEEILKLLHEAE N PPPSS
Subjt:  MGETSEEKQESKVE-KEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPSS
A0A1S3AV24 protein PXR13.6e-1980Show/hide
Query:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPS
        MGETSEEK E KV  EKKEKKDKEKHGE E++E       K+KKKKEK PADKKDP+KLRQKLEKLEAKMQALAVKKEEILKLLHEAE N PPPS
Subjt:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPS
A0A6J1C8D9 nucleolar protein 583.8e-1371.57Show/hide
Query:  MGETSEEKQESK--VEKEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNA----PPP
        MGE SEEK E +   +KEKKEKKDKEKH E E  E EKKKEKKEKKK  K P DKKDP+KLRQKLEKLE KM+ LA+KKEE+LKLL EAE NA    PPP
Subjt:  MGETSEEKQESK--VEKEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNA----PPP

Query:  SS
        SS
Subjt:  SS
A0A6J1E7S6 protein PXR12.5e-1268.32Show/hide
Query:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKE--------KKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAP
        MG TSEEK E KVEK K++KKDKEKH EEE+D  +KK + K+        K+KK+K+PAD KDP KLRQKLEKLE KMQALAVKKEEILKL+HEAE NA 
Subjt:  MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKE--------KKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAP

Query:  P
        P
Subjt:  P
A0A6J1K499 protein PXR18.0e-1163.73Show/hide
Query:  MGETSEEKQESKVEKEKK---EKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHN---APPP
        MG  SEEK E KVEK++K   E+ D+++  ++ +D+D++ KE ++K+KK K+PADKKDP+KLRQKLEKLE KMQALAVKKEE+LKLLHEAE N   APPP
Subjt:  MGETSEEKQESKVEKEKK---EKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHN---APPP

Query:  SS
        SS
Subjt:  SS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G62750.1 unknown protein3.3e-0950Show/hide
Query:  EKQESKVEKEKKEKKDKEKH--GEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEH--------NAPPPSS
        EK+E K +K+KK+K + +K+  GEE ED+++K K+K +K KKEK P DKKDP KL+ KL+K+E K+QA+ +KK+EI+KL+H+AE         +APPP++
Subjt:  EKQESKVEKEKKEKKDKEKH--GEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEH--------NAPPPSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAACCTCAGAAGAGAAGCAGGAGAGTAAGGTGGAGAAGGAGAAGAAGGAGAAGAAAGATAAAGAGAAACATGGAGAAGAAGAAGAAGATGAAGATGAGAAGAA
GAAGGAAAAGAAAGAGAAGAAGAAGAAAGAGAAAGAGCCTGCAGATAAGAAAGACCCATCAAAACTCAGACAGAAGCTTGAGAAGCTTGAAGCCAAGATGCAAGCTTTGG
CTGTCAAGAAAGAAGAGATCTTGAAACTGCTCCATGAAGCTGAACACAATGCTCCACCACCTTCCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAACCTCAGAAGAGAAGCAGGAGAGTAAGGTGGAGAAGGAGAAGAAGGAGAAGAAAGATAAAGAGAAACATGGAGAAGAAGAAGAAGATGAAGATGAGAAGAA
GAAGGAAAAGAAAGAGAAGAAGAAGAAAGAGAAAGAGCCTGCAGATAAGAAAGACCCATCAAAACTCAGACAGAAGCTTGAGAAGCTTGAAGCCAAGATGCAAGCTTTGG
CTGTCAAGAAAGAAGAGATCTTGAAACTGCTCCATGAAGCTGAACACAATGCTCCACCACCTTCCTCTTAA
Protein sequenceShow/hide protein sequence
MGETSEEKQESKVEKEKKEKKDKEKHGEEEEDEDEKKKEKKEKKKKEKEPADKKDPSKLRQKLEKLEAKMQALAVKKEEILKLLHEAEHNAPPPSS