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CaUC01G014700 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G014700
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionphotosystem I reaction center subunit N, chloroplastic
Genome locationCiama_Chr01:27737607..27739304
RNA-Seq ExpressionCaUC01G014700
SyntenyCaUC01G014700
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0030093 - chloroplast photosystem I (cellular component)
InterPro domainsIPR008796 - Photosystem I reaction centre subunit N, chloroplastic
IPR044907 - Photosystem I reaction centre subunit N superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604288.1 Photosystem I reaction center subunit N, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.1e-8494.74Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADL+SK+ A PSVASPGVVGYKLPAIRAQQARVPEA N+GRR+ALLYLGATLFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_004148659.1 photosystem I reaction center subunit N, chloroplastic [Cucumis sativus]2.8e-8595.91Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTA PSVASPGVVGYKLPAIRAQQ +VPEA N+GRRTALLYLGA+LFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_008441057.1 PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis melo]2.3e-8798.83Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEA NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_022950888.1 photosystem I reaction center subunit N, chloroplastic-like [Cucurbita moschata]3.1e-8494.74Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADL+SK+ A PSVASPGVVGYKLPAIRAQQARVPEA N+GRR+ALLYLGATLFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

XP_038883748.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Benincasa hispida]1.0e-8799.42Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEA NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

TrEMBL top hitse value%identityAlignment
A0A0A0KFM1 Uncharacterized protein1.4e-8595.91Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTA PSVASPGVVGYKLPAIRAQQ +VPEA N+GRRTALLYLGA+LFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A1S3B240 photosystem I reaction center subunit N, chloroplastic1.1e-8798.83Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEA NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A5D3DQX9 Photosystem I reaction center subunit N1.1e-8798.83Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEA NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1BT08 photosystem I reaction center subunit N, chloroplastic isoform X12.8e-8393.57Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+A P VASPGV GYKLPAIRAQQARVPEA N+GRRTALLYLGATLFAAAAAASNS+ANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

A0A6J1GG47 photosystem I reaction center subunit N, chloroplastic-like1.5e-8494.74Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADL+SK+ A PSVASPGVVGYKLPAIRAQQARVPEA N+GRR+ALLYLGATLFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

SwissProt top hitse value%identityAlignment
O65107 Photosystem I reaction center subunit N, chloroplastic (Fragment)2.0e-4183.7Show/hide
Query:  SNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        +  SA A + ++YLEKSKANKELNDKKRLATSGANFARAYTVEFG+C+FP NFTGCQDLAKQKKVPFISDDLE+ECEGK+K+KCGSNVFWKW
Subjt:  SNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

P31093 Photosystem I reaction center subunit N, chloroplastic1.5e-4467.83Show/hide
Query:  AVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKF
        AVP  ASP           A   RV  A  + RR+ALL L A    AA AAS  SA A V ++YLEKSK NKELNDKKR ATSGANFARAYTV+FG+CKF
Subjt:  AVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKF

Query:  PENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        P NFTGCQDLAKQKKVPFI+DDLE+ECEGK+K+KCGSNVFWKW
Subjt:  PENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

P49107 Photosystem I reaction center subunit N, chloroplastic5.7e-5766.47Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQARVPEAN-NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKA
        MA MNSSVL C+YAI+G+GS +LN K+  V S    G      +P I+AQ+    + + + GRR+A+++L ATLF+ AA   ++SANAGVI++YLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQARVPEAN-NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

Q9SBN5 Photosystem I reaction center subunit N, chloroplastic2.0e-2553.79Show/hide
Query:  AIRAQQARVPEAN-----------NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFT
        A+RAQ A+V  A            +   R  LL LG  L AAA A    +ANAGV+ED L KS ANK LN+KKRLATS AN AR+ TV  GTC+FPENF 
Subjt:  AIRAQQARVPEAN-----------NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFT

Query:  GCQDLAKQKKVPFISDDLELECEGKDKYKCGS
        GC++LA  K V +I++DL++ECEGKD   CGS
Subjt:  GCQDLAKQKKVPFISDDLELECEGKDKYKCGS

Arabidopsis top hitse value%identityAlignment
AT5G64040.1 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)4.0e-5866.47Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQARVPEAN-NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKA
        MA MNSSVL C+YAI+G+GS +LN K+  V S    G      +P I+AQ+    + + + GRR+A+++L ATLF+ AA   ++SANAGVI++YLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQARVPEAN-NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

AT5G64040.2 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)1.4e-3961.81Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQARVPEAN-NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKA
        MA MNSSVL C+YAI+G+GS +LN K+  V S    G      +P I+AQ+    + + + GRR+A+++L ATLF+ AA   ++SANAGVI++YLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQARVPEAN-NEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQK
        NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQK
Subjt:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCATTTCCGGAGCTGGGTCAGCTGACCTGAACTCCAAACTCACCGCCGTCCCTTCTGTTGCGTCT
CCTGGGGTTGTGGGATACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAATAACGAAGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCC
ACCCTCTTTGCTGCTGCTGCGGCTGCCTCCAACTCCTCTGCTAATGCTGGAGTCATTGAAGATTACCTTGAGAAGAGTAAAGCTAACAAGGAGTTGAATGACAAG
AAACGATTGGCAACAAGTGGGGCAAACTTTGCAAGGGCATACACTGTTGAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAA
CAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGTAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA
mRNA sequenceShow/hide mRNA sequence
TGGAATTTGAAGCACTCCTTCAAGATTTCAAAGTGGGTCCAAAATTGAAGCTCGCCACAAAAATTTCCATGTCCGAAAACCCTAATCACAGCCATGGTTTGCCAA
TTGGGAGTGAGGAAATCTCACCTTATCCACACTCTCACCACAATCTCTTATCCAATTCCATCTCAAACATCCCCTCTTTTATCAGATTCCCTCATAATCCCACTA
CCCATTAACAACTGACAGCCATTAATTCCATCTCCGAGTTTGTCCAATCAGTTGCAAACCAATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCAT
TTCCGGAGCTGGGTCAGCTGACCTGAACTCCAAACTCACCGCCGTCCCTTCTGTTGCGTCTCCTGGGGTTGTGGGATACAAGTTGCCTGCGATTAGGGCTCAACA
GGCTAGGGTTCCTGAAGCCAATAACGAAGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCACCCTCTTTGCTGCTGCTGCGGCTGCCTCCAACTCCTCTGCTAA
TGCTGGAGTCATTGAAGATTACCTTGAGAAGAGTAAAGCTAACAAGGAGTTGAATGACAAGAAACGATTGGCAACAAGTGGGGCAAACTTTGCAAGGGCATACAC
TGTTGAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAACAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTG
TGAGGGTAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGAAGAGAAGAGAACCATTTTAAAGTCTTTGTATTCCTCACCACCATTAGTTACTC
TTCCCCTTGTATCTAATTTTTCAACTCTTAAAAAGTGTGAAATTTTATTATGCCTTTTTGGGGACATTTGTTCCAATTCCAGTGCTTTCTTTCTTCTCTTTGAGA
CCAAAAGAAGCAAAATGAGAGTAGAAACCCTAGACATCAATTGCATTAACATTTGTTAGAATTTTTCATCAATAAACATTACAAAAATTTGAGTACCACGGCACT
A
Protein sequenceShow/hide protein sequence
MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEANNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANKELNDK
KRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW