; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G015100 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G015100
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr01:28342155..28342689
RNA-Seq ExpressionCaUC01G015100
SyntenyCaUC01G015100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KCW62444.1 hypothetical protein EUGRSUZ_H05083 [Eucalyptus grandis]3.5e-0486.21Show/hide
Query:  SDIQGRKKGSISSQAWRRRKLSGGHCECF
        SDIQGRK  S SSQAWRRRKL GGHCECF
Subjt:  SDIQGRKKGSISSQAWRRRKLSGGHCECF
KGN48407.1 hypothetical protein Csa_003040 [Cucumis sativus]2.4e-0588.24Show/hide
Query:  LVTLRVSDIQGRIKTAEALKPGEGESSQAATANV
        ++ +RVSDIQGRIKTAEALKPGEGESSQAATANV
Subjt:  LVTLRVSDIQGRIKTAEALKPGEGESSQAATANV
TrEMBL top hitse value%identityAlignment
A0A059B8W6 Uncharacterized protein1.7e-0486.21Show/hide
Query:  SDIQGRKKGSISSQAWRRRKLSGGHCECF
        SDIQGRK  S SSQAWRRRKL GGHCECF
Subjt:  SDIQGRKKGSISSQAWRRRKLSGGHCECF
A0A0A0KJ49 Uncharacterized protein1.2e-0588.24Show/hide
Query:  LVTLRVSDIQGRIKTAEALKPGEGESSQAATANV
        ++ +RVSDIQGRIKTAEALKPGEGESSQAATANV
Subjt:  LVTLRVSDIQGRIKTAEALKPGEGESSQAATANV
A0A5K1BHC7 Uncharacterized protein (Fragment)5.0e-0475Show/hide
Query:  SDIQGRKKGSISSQAWRRRKLSGGHCECFEKQALRI
        SDIQGR   S SSQAWRRRKL  GHCECFEKQA  +
Subjt:  SDIQGRKKGSISSQAWRRRKLSGGHCECFEKQALRI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACTCAGACATCCAAGGAAGGAAGAAAGGCAGCATTAGCTCTCAAGCCTGGCGAAGGCGAAAGCTCTCAGGCGGCCACTGCGAATGTTTTGAGAAACAAGCCTT
AAGGATATCATCATCTGTAAAATTGAGTAACGGAAGTGAAGATCTTCCATCCAACAATGATCAGCAAGACATGAAAGACAGAGCTGACAAAAACACTGCTAAAGAGGCAG
ACGCAAAGTCCCAATTAGTCACTTTGAGAGTCTCAGACATCCAAGGAAGGATAAAGACAGCAGAAGCTCTCAAGCCCGGCGAAGGCGAAAGCTCTCAGGCGGCCACTGCG
AATGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGACTCAGACATCCAAGGAAGGAAGAAAGGCAGCATTAGCTCTCAAGCCTGGCGAAGGCGAAAGCTCTCAGGCGGCCACTGCGAATGTTTTGAGAAACAAGCCTT
AAGGATATCATCATCTGTAAAATTGAGTAACGGAAGTGAAGATCTTCCATCCAACAATGATCAGCAAGACATGAAAGACAGAGCTGACAAAAACACTGCTAAAGAGGCAG
ACGCAAAGTCCCAATTAGTCACTTTGAGAGTCTCAGACATCCAAGGAAGGATAAAGACAGCAGAAGCTCTCAAGCCCGGCGAAGGCGAAAGCTCTCAGGCGGCCACTGCG
AATGTTTAG
Protein sequenceShow/hide protein sequence
MGDSDIQGRKKGSISSQAWRRRKLSGGHCECFEKQALRISSSVKLSNGSEDLPSNNDQQDMKDRADKNTAKEADAKSQLVTLRVSDIQGRIKTAEALKPGEGESSQAATA
NV