CuGenDBv2

Gene ID	CaUC01G015570
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	transmembrane protein 220
Genome location	Ciama_Chr01:28905050..28907283
RNA-Seq Expression	CaUC01G015570
Synteny	CaUC01G015570
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029377 - TMEM220 protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004141949.1 transmembrane protein 220 isoform X2 [Cucumis sativus]

2.4e-64

87.16

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYSSCS+LMGFLFAYSTA+QFNDPDWYLWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA SSSSPK+ RT  SKSKR FPR+LTYG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRALL

XP_008440175.1 PREDICTED: transmembrane protein 220 [Cucumis melo]

3.1e-64

86.99

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYSSCS+LMGFLFAYSTA+QFNDPDWYLWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA SSSSPK+  TSKSKR FPR+LTYG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL

XP_031742851.1 transmembrane protein 220 isoform X1 [Cucumis sativus]

8.1e-65

87.07

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYSSCS+LMGFLFAYSTA+QFNDPDWYLWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRAL
        TGSGLVVCSMILHLIAA SSSSPK+ RT  SKSKR FPR+LTYG+A+
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRAL

XP_038881309.1 transmembrane protein 220 isoform X1 [Benincasa hispida]

5.1e-67

86.18

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMGFLFAYSTA+QFNDPDWYLWVPLYGCACAVNLLKW V +EAM  V KATMG GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAA--SSSSSPKIHRTSKSKREFPRYLTYGRALLEPAL
        TGSGLVVCSMILHLIAA  SSSSS +IHRTSKSKREFPRYLTYG A+   +L
Subjt:  TGSGLVVCSMILHLIAA--SSSSSPKIHRTSKSKREFPRYLTYGRALLEPAL

XP_038881310.1 transmembrane protein 220 isoform X2 [Benincasa hispida]

1.1e-66

82.42

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMGFLFAYSTA+QFNDPDWYLWVPLYGCACAVNLLKW V +EAM  V KATMG GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAA--SSSSSPKIHRTSKSKREFPRYLTYGRALLE------PALLLVPKFK
        TGSGLVVCSMILHLIAA  SSSSS +IHRTSKSKREFPRYLTYG A L       P   LV K K
Subjt:  TGSGLVVCSMILHLIAA--SSSSSPKIHRTSKSKREFPRYLTYGRALLE------PALLLVPKFK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KI28 Uncharacterized protein

1.1e-64

87.16

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYSSCS+LMGFLFAYSTA+QFNDPDWYLWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA SSSSPK+ RT  SKSKR FPR+LTYG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRT--SKSKREFPRYLTYGRALL

A0A1S3B186 transmembrane protein 220

1.5e-64

86.99

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYSSCS+LMGFLFAYSTA+QFNDPDWYLWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA SSSSPK+  TSKSKR FPR+LTYG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL

A0A5D3CNK6 Transmembrane protein 220

1.5e-64

86.99

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MA PSKLYSSCS+LMGFLFAYSTA+QFNDPDWYLWVPLYGCACAVNLLKW+V LEAMN V KA MG+GIC+W+KVVAEDYMNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVVCSMILHLIAA SSSSPK+  TSKSKR FPR+LTYG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL

A0A6J1HG20 uncharacterized protein LOC111463236

9.7e-56

76.03

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLM FLFAYSTA+QFNDPDWYLW+PLYGCACAVNLL WDV L+ +  + KAT+GLGIC+W+KVVAED++NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVV SM+LHLIA SSSS     RT K +R F RY++YG A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL

A0A6J1KP55 uncharacterized protein LOC111497019

4.8e-55

76.03

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLM FLFAYSTA+QFNDPDWYLW+PLYGCACAVNLL WDV LE +  V KAT+GLGIC+W+KVVAED+++GIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL
        TGSGLVV SM+LHLIA SSSS     RT K +R F RY+++G A L
Subjt:  TGSGLVVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G23755.1 unknown protein

1.5e-29

53.72

Show/hide

Query:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK
        MA P  L+  CSLLM FLFAYS ++Q NDPDWY W PLY  AC VNL+ +   ++ M  + +  + LG+ + +KV+AED +    G LSLDL+ RVVREK
Subjt:  MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREK

Query:  TGSGLVVCSMILHLIAASSSS
         GSGLV+ SM+L L A+SSSS
Subjt:  TGSGLVVCSMILHLIAASSSS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAACACCCTCCAAATTATACAGCAGCTGCTCTCTGCTAATGGGGTTTTTGTTTGCTTATTCCACAGCTCTTCAGTTTAACGATCCTGATTGGTATTTATGG
GTTCCACTTTATGGGTGTGCTTGTGCTGTGAATCTTCTCAAATGGGATGTCTTCTTAGAAGCCATGAATCAAGTTGGTAAGGCAACAATGGGACTTGGAATATGT
ATGTGGATGAAGGTGGTAGCAGAGGATTATATGAATGGTATTGCAGGTTTTCTCTCCCTAGATTTAAGTGAGAGAGTAGTGAGGGAGAAAACAGGAAGTGGGTTG
GTTGTGTGTTCCATGATTTTACATCTGATAGCTGCATCATCATCATCATCCCCAAAAATTCACAGAACAAGTAAAAGTAAAAGGGAATTTCCAAGGTATCTCACA
TATGGGCGTGCGCTCTTGGAACCTGCCTTGCTTCTCGTTCCAAAATTTAAAGCTCCAGATCTTTTTCCCTCAAATGGTAGGCTGTACATGTTCTTCAAATGTGGC
CTCAGCAACTTGAAGATTCACAGCCATTTCCTCCAGGCAGTAGCTCGCGTCGATAATTAA

mRNA sequence

Show/hide mRNA sequence

TTGTTGTTCGATCAGATAAGGTTTGAAAAAATAAGTGAAAATGGCAACACCCTCCAAATTATACAGCAGCTGCTCTCTGCTAATGGGGTTTTTGTTTGCTTATTC
CACAGCTCTTCAGTTTAACGATCCTGATTGGTATTTATGGGTTCCACTTTATGGGTGTGCTTGTGCTGTGAATCTTCTCAAATGGGATGTCTTCTTAGAAGCCAT
GAATCAAGTTGGTAAGGCAACAATGGGACTTGGAATATGTATGTGGATGAAGGTGGTAGCAGAGGATTATATGAATGGTATTGCAGGTTTTCTCTCCCTAGATTT
AAGTGAGAGAGTAGTGAGGGAGAAAACAGGAAGTGGGTTGGTTGTGTGTTCCATGATTTTACATCTGATAGCTGCATCATCATCATCATCCCCAAAAATTCACAG
AACAAGTAAAAGTAAAAGGGAATTTCCAAGGTATCTCACATATGGGCGTGCGCTCTTGGAACCTGCCTTGCTTCTCGTTCCAAAATTTAAAGCTCCAGATCTTTT
TCCCTCAAATGGTAGGCTGTACATGTTCTTCAAATGTGGCCTCAGCAACTTGAAGATTCACAGCCATTTCCTCCAGGCAGTAGCTCGCGTCGATAATTAA

Protein sequence

Show/hide protein sequence

MATPSKLYSSCSLLMGFLFAYSTALQFNDPDWYLWVPLYGCACAVNLLKWDVFLEAMNQVGKATMGLGICMWMKVVAEDYMNGIAGFLSLDLSERVVREKTGSGL
VVCSMILHLIAASSSSSPKIHRTSKSKREFPRYLTYGRALLEPALLLVPKFKAPDLFPSNGRLYMFFKCGLSNLKIHSHFLQAVARVDN

CaUC01G015570 (gene) of Watermelon (USVL246-FR2) v1 genome