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CaUC01G016290 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G016290
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionTranscriptional regulator
Genome locationCiama_Chr01:29762390..29763593
RNA-Seq ExpressionCaUC01G016290
SyntenyCaUC01G016290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER46420.1 transcriptional regulator [Striga asiatica]8.4e-0942.74Show/hide
Query:  IMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGFELGV
        +  + IL+G ALV+  L    +E         +LH+V +D  V L +  RVV +LVDED +A +VEG PE+G +GEAEDEE  R G    D       GV
Subjt:  IMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGFELGV

Query:  GHMEGV-----VGFGGV
        GH+ GV     VG GGV
Subjt:  GHMEGV-----VGFGGV

KAF5444354.1 hypothetical protein F2P56_036839 [Juglans regia]2.5e-0536.43Show/hide
Query:  KNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGFELGVGHM
        + +L+ +ALV++      +E       G V H+V  D  V LF        LV  DCAAV VEG PE+G +GE + +++    A ++ VG G ELG  H+
Subjt:  KNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGFELGVGHM

Query:  EGVVGF---GGVVKKGINDSGRERGGGGG
          V      GGVV++ + D  RE  G GG
Subjt:  EGVVGF---GGVVKKGINDSGRERGGGGG

PON40830.1 hypothetical protein PanWU01x14_294330 [Parasponia andersonii]1.3e-0940.13Show/hide
Query:  FIAANLLHFSVIIMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITR-SGA
        ++   ++     I  + IL G+ALVS     RR E ++      VLH+V +D  + L         LV+E  AAVVV+G P+K  +GEAEDEE     GA
Subjt:  FIAANLLHFSVIIMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITR-SGA

Query:  FSEDVGDGFELGVGH--MEGVVGFGGVVKKGINDSGRERGGGGGGSGRGGDEGRGGG
         +E    G +LG GH    G VG GGVVK+G+ D  RER        RGG E  GGG
Subjt:  FSEDVGDGFELGVGH--MEGVVGFGGVVKKGINDSGRERGGGGGGSGRGGDEGRGGG

PON42966.1 hypothetical protein PanWU01x14_277380 [Parasponia andersonii]2.8e-1231.5Show/hide
Query:  TKLKTVLIHLLNHIVAKRMSSLHQVFTTKKFIAANLL------------------------------------------------HFSVIIMH-------
        T+L+ +L+H  +HI+A++++ LHQ+  T++ I AN L                                                H  + ++H       
Subjt:  TKLKTVLIHLLNHIVAKRMSSLHQVFTTKKFIAANLL------------------------------------------------HFSVIIMH-------

Query:  -------KNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGF
               + +L G+ALV +L+  + +E    A    VL +V VD  V L     VV +LVDED  AVVVEG PE+G +GE E +E+ R GA  + V DG 
Subjt:  -------KNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGF

Query:  ELGVGHMEGVVGFGGVVKKGINDSGRERG----GGGGGSGRGGDEGRGGGGDGS
        +L   H+EGVV  G VV++G++  GR+RG            GG  G GGGG  S
Subjt:  ELGVGHMEGVVGFGGVVKKGINDSGRERG----GGGGGSGRGGDEGRGGGGDGS

PON88101.1 LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_161270 [Trema orientale]1.0e-0638Show/hide
Query:  FIAANLLHFSVIIMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVD--FGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITR-S
        ++   ++     I  + +L G ALVS     RR E ++      VLH+V +D   G+    +  +  +   E  AAVVV+G PE+  +GEAEDEE     
Subjt:  FIAANLLHFSVIIMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVD--FGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITR-S

Query:  GAFSEDVGDGFELGVGH--MEGVVGFGGVVKKGINDSGRERGGG---GGG
        GA +E    G +LG GH    G VG GGVV++G+ D  RER GG   GGG
Subjt:  GAFSEDVGDGFELGVGH--MEGVVGFGGVVKKGINDSGRERGGG---GGG

TrEMBL top hitse value%identityAlignment
A0A2P5AW99 Uncharacterized protein6.3e-1040.13Show/hide
Query:  FIAANLLHFSVIIMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITR-SGA
        ++   ++     I  + IL G+ALVS     RR E ++      VLH+V +D  + L         LV+E  AAVVV+G P+K  +GEAEDEE     GA
Subjt:  FIAANLLHFSVIIMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITR-SGA

Query:  FSEDVGDGFELGVGH--MEGVVGFGGVVKKGINDSGRERGGGGGGSGRGGDEGRGGG
         +E    G +LG GH    G VG GGVVK+G+ D  RER        RGG E  GGG
Subjt:  FSEDVGDGFELGVGH--MEGVVGFGGVVKKGINDSGRERGGGGGGSGRGGDEGRGGG

A0A2P5B2I7 Uncharacterized protein1.4e-1231.5Show/hide
Query:  TKLKTVLIHLLNHIVAKRMSSLHQVFTTKKFIAANLL------------------------------------------------HFSVIIMH-------
        T+L+ +L+H  +HI+A++++ LHQ+  T++ I AN L                                                H  + ++H       
Subjt:  TKLKTVLIHLLNHIVAKRMSSLHQVFTTKKFIAANLL------------------------------------------------HFSVIIMH-------

Query:  -------KNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGF
               + +L G+ALV +L+  + +E    A    VL +V VD  V L     VV +LVDED  AVVVEG PE+G +GE E +E+ R GA  + V DG 
Subjt:  -------KNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGF

Query:  ELGVGHMEGVVGFGGVVKKGINDSGRERG----GGGGGSGRGGDEGRGGGGDGS
        +L   H+EGVV  G VV++G++  GR+RG            GG  G GGGG  S
Subjt:  ELGVGHMEGVVGFGGVVKKGINDSGRERG----GGGGGSGRGGDEGRGGGGDGS

A0A5A7QMN2 Transcriptional regulator4.1e-0942.74Show/hide
Query:  IMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGFELGV
        +  + IL+G ALV+  L    +E         +LH+V +D  V L +  RVV +LVDED +A +VEG PE+G +GEAEDEE  R G    D       GV
Subjt:  IMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAAVVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGFELGV

Query:  GHMEGV-----VGFGGV
        GH+ GV     VG GGV
Subjt:  GHMEGV-----VGFGGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAATTGAAAACAGTTCTCATCCATCTTCTCAACCACATAGTGGCCAAGCGTATGAGTAGCCTCCACCAAGTTTTCACTACAAAGAAATTCATCGCTGCA
AACCTTCTCCACTTCTCCGTAATAATCATGCACAAAAACATTCTGTACGGGACGGCACTCGTTTCGAATCTGCTCTCTAACCGTCGCAATGAGTTCATTCAATTC
GCTTATTTTGGTAGTGTATTGCACATCGTAAGCGTCGATTTCGGGGTGTTTCTCTTCAATGAAAGCCGCGTAGTAGCGATTCTCGTCGATGAAGACTGTGCGGCC
GTTGTGGTTGAGGGATTTCCAGAGAAGGGTTTCTTGGGTGAGGCCGAAGATGAGGAAATTACAAGGAGTGGAGCATTTTCGGAGGACGTCGGAGATGGGTTTGAG
CTCGGAGTGGGTCATATGGAAGGAGTCGTTGGATTTGGAGGCGTAGTAAAGAAGGGTATTAATGACAGTGGTCGGGAGAGGGGTGGCGGAGGCGGGGGAAGCGGA
AGAGGAGGAGACGAGGGAAGAGGCGGCGGCGGTGATGGGAGTAGTGGATGCGCGAGTGTAGACAAGGAGGAGAAGGAGGAGGAAGGCGAGAGTGAAGAAGGAGAG
GAAGGCAAGAAGCCATATCTTGGAGGAAGTGCCCTGTTTTTGGATGTAAGGATGAAGGAGAATGAGCCTTGTGTTATTGGGATTGGGGGCTTGGGTGAGAAGGTT
TTAAGAAATAGGGAGGTGGGTGAAGGGAAATTGAGGAAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAATTGAAAACAGTTCTCATCCATCTTCTCAACCACATAGTGGCCAAGCGTATGAGTAGCCTCCACCAAGTTTTCACTACAAAGAAATTCATCGCTGCA
AACCTTCTCCACTTCTCCGTAATAATCATGCACAAAAACATTCTGTACGGGACGGCACTCGTTTCGAATCTGCTCTCTAACCGTCGCAATGAGTTCATTCAATTC
GCTTATTTTGGTAGTGTATTGCACATCGTAAGCGTCGATTTCGGGGTGTTTCTCTTCAATGAAAGCCGCGTAGTAGCGATTCTCGTCGATGAAGACTGTGCGGCC
GTTGTGGTTGAGGGATTTCCAGAGAAGGGTTTCTTGGGTGAGGCCGAAGATGAGGAAATTACAAGGAGTGGAGCATTTTCGGAGGACGTCGGAGATGGGTTTGAG
CTCGGAGTGGGTCATATGGAAGGAGTCGTTGGATTTGGAGGCGTAGTAAAGAAGGGTATTAATGACAGTGGTCGGGAGAGGGGTGGCGGAGGCGGGGGAAGCGGA
AGAGGAGGAGACGAGGGAAGAGGCGGCGGCGGTGATGGGAGTAGTGGATGCGCGAGTGTAGACAAGGAGGAGAAGGAGGAGGAAGGCGAGAGTGAAGAAGGAGAG
GAAGGCAAGAAGCCATATCTTGGAGGAAGTGCCCTGTTTTTGGATGTAAGGATGAAGGAGAATGAGCCTTGTGTTATTGGGATTGGGGGCTTGGGTGAGAAGGTT
TTAAGAAATAGGGAGGTGGGTGAAGGGAAATTGAGGAAGGATTGA
Protein sequenceShow/hide protein sequence
MTKLKTVLIHLLNHIVAKRMSSLHQVFTTKKFIAANLLHFSVIIMHKNILYGTALVSNLLSNRRNEFIQFAYFGSVLHIVSVDFGVFLFNESRVVAILVDEDCAA
VVVEGFPEKGFLGEAEDEEITRSGAFSEDVGDGFELGVGHMEGVVGFGGVVKKGINDSGRERGGGGGGSGRGGDEGRGGGGDGSSGCASVDKEEKEEEGESEEGE
EGKKPYLGGSALFLDVRMKENEPCVIGIGGLGEKVLRNREVGEGKLRKD