CuGenDBv2

Gene ID	CaUC01G016330
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Genome location	Ciama_Chr01:29794126..29794546
RNA-Seq Expression	CaUC01G016330
Synteny	CaUC01G016330
Gene Ontology terms	GO:0006633 - fatty acid biosynthetic process (biological process) GO:2001295 - malonyl-CoA biosynthetic process (biological process) GO:0009317 - acetyl-CoA carboxylase complex (cellular component) GO:0009570 - chloroplast stroma (cellular component) GO:0003989 - acetyl-CoA carboxylase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0016743 - carboxyl- or carbamoyltransferase activity (molecular function)
InterPro domains	IPR011762 - Acetyl-coenzyme A carboxyltransferase, N-terminal IPR029045 - ClpP/crotonase-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

QXJ40957.1 acetyl-CoA carboxylase subunit beta [Xanthostemon chrysanthus]

2.0e-24

78.08

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Query:  YDRRENKGDESKYERKIKKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        + RREN  D        +KYRHLWVQCENCYGLNYKKLLKSK+NICDQCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  YDRRENKGDESKYERKIKKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

YP_009325998.1 acetyl-CoA carboxylase beta subunit [Citrullus lanatus]

2.0e-24

94.64

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

YP_009420803.1 acetyl-CoA carboxylase beta subunit [Citrullus colocynthis]

2.0e-24

94.64

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

YP_009431651.1 acetyl-CoA carboxylase beta subunit [Citrullus rehmii]

2.0e-24

94.64

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

YP_009663162.1 AccD [Ipomoea goyazensis]

4.4e-24

76.81

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Query:  ENKGDESKYERKIKKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        EN+ + S    + KKYRHLW+QCENCYGLNYKK LKSK+NIC+QCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  ENKGDESKYERKIKKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LF62 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

9.6e-25

94.64

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

A0A1P8LFN2 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

9.6e-25

94.64

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

A0A249RWX9 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

9.6e-25

94.64

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

A0A249RX87 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

9.6e-25

94.64

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

A0A343A8B9 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

9.6e-25

94.64

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

SwissProt top hits

e value

%identity

Alignment

P12219 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

3.8e-26

89.29

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KYRHLWVQCENCYGLNYKK LKSK+NIC+QCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

Q2MI91 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

8.4e-26

87.5

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KY+HLWVQCENCYGLNYKK LKSK+NIC+QCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

Q2MIH8 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

8.4e-26

87.5

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KY+HLWVQCENCYGLNYKK LKSK+NIC+QCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

Q3C1J3 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

3.8e-26

89.29

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        +KYRHLWVQCENCYGLNYKK LKSK+NIC+QCGYHLKMSSS+RIELLIDPGTWDP+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

Q49KY9 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic

1.3e-26

76.71

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Query:  YDRRENKGDESKYERKIKKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        + RREN  D        +KYRHLWVQCENCYGLNYKKLLKSK+NICDQCGYHLKMSSS+RIEL IDPGTWDP+
Subjt:  YDRRENKGDESKYERKIKKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta

5.1e-18

64.29

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Query:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV
        + Y  LW+QC+NCYGL YKK+   K+N+C+QCG++LKMSSS RIEL IDPGTW+P+
Subjt:  KKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPV

Sequences

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CDS sequence

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ATGTATGACCGACGAGAGAATAAAGGTGATGAAAGTAAATATGAGAGGAAGATTAAAAAATACAGGCATTTGTGGGTTCAATGCGAAAATTGTTATGGATTAAATTATAA
GAAATTGTTGAAATCAAAACTGAATATTTGTGACCAATGTGGATACCATTTGAAAATGAGTAGTTCAAATAGAATCGAACTTTTGATTGATCCGGGTACTTGGGACCCAG
TTCCGGGTTCGAGTCCCGGGCAACCCATATTAATGATGATACAGCAAGATGGACTTTACCCCGACTAA

mRNA sequence

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Protein sequence

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MYDRRENKGDESKYERKIKKYRHLWVQCENCYGLNYKKLLKSKLNICDQCGYHLKMSSSNRIELLIDPGTWDPVPGSSPGQPILMMIQQDGLYPD

CaUC01G016330 (gene) of Watermelon (USVL246-FR2) v1 genome