; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G016500 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G016500
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionMYB transcription factor
Genome locationCiama_Chr01:29943999..29946580
RNA-Seq ExpressionCaUC01G016500
SyntenyCaUC01G016500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4373896.1 hypothetical protein F8388_007802 [Cannabis sativa]1.4e-1536.56Show/hide
Query:  FWYRSGLKLMGSSHSFESLCMAQALTSTIVPRG---TSDRVP--ILVEKASDRSSCSFLLPSSFGVHQLAPARTHPLSSPIELISFQDHSRSSSIWKSP-
        F  R  + LMG  + +++ C     T  I+ R    TS  +   I+    S  SSCS L+ S    H +     HP   P +  +  D  +  ++  SP 
Subjt:  FWYRSGLKLMGSSHSFESLCMAQALTSTIVPRG---TSDRVP--ILVEKASDRSSCSFLLPSSFGVHQLAPARTHPLSSPIELISFQDHSRSSSIWKSP-

Query:  GFDTPAIATISLINSLNLLA----SSSFVTSSPFRTNRFTSSLRISANSLIRDKEKISMAPIRRRFRQWSPYGAAIMPMYFPMSKRGRLARTTSFLVKHS
        G +      +S ++S NL+     + +F++    R +  TSSL I      R +EKISMAP+RRR RQWSPYG       FP  + GRLA+T SFLVKHS
Subjt:  GFDTPAIATISLINSLNLLA----SSSFVTSSPFRTNRFTSSLRISANSLIRDKEKISMAPIRRRFRQWSPYGAAIMPMYFPMSKRGRLARTTSFLVKHS

Query:  STAADEDITTASLDPRRRDITGPYLAE
        STA  +D  T   DP  R+ T PYL E
Subjt:  STAADEDITTASLDPRRRDITGPYLAE

KAF4377577.1 hypothetical protein G4B88_006857 [Cannabis sativa]9.4e-1547.46Show/hide
Query:  ISLINSLNLLA----SSSFVTSSPFRTNRFTSSLRISANSLIRDKEKISMAPIRRRFRQWSPYGAAIMPMYFPMSKRGRLARTTSFLVKHSSTAADEDIT
        +S ++S NL+     + +F++    R +  TSSL I      R +EKISMAP+RRR RQWSPYG       FP  + GRLA+T SFLVKHSSTA  +D  
Subjt:  ISLINSLNLLA----SSSFVTSSPFRTNRFTSSLRISANSLIRDKEKISMAPIRRRFRQWSPYGAAIMPMYFPMSKRGRLARTTSFLVKHSSTAADEDIT

Query:  TASLDPRRRDITGPYLAE
        T   DP  R+ T PYL E
Subjt:  TASLDPRRRDITGPYLAE

KAF4389003.1 hypothetical protein F8388_026732 [Cannabis sativa]9.4e-0748.15Show/hide
Query:  IRPITLCAMADPGQARLPTPKGNNLCTSTAS--DFWYRSGLKLMGSSHSFESLCMAQALTSTIVPRGTSDRVPILVEKASD
        ++PI   A   PGQARLP+P G +L  S  S   F   SG+KL  S H+ ESLC+A ALT+ IVPRGTS   P++V+   +
Subjt:  IRPITLCAMADPGQARLPTPKGNNLCTSTAS--DFWYRSGLKLMGSSHSFESLCMAQALTSTIVPRGTSDRVPILVEKASD

KAG5000639.1 hypothetical protein JHK87_021711 [Glycine soja]1.5e-0443.06Show/hide
Query:  PYGAAIMPMYFPMSKRGRLARTTSFLVKHSSTAADEDITTASLDPRRRDITGPYLAERFWKFRCSGFFKRWR
        P G  ++   F   + G LARTTSFLVKHS     E+ TT   +P  R++  PYL ER  K R  G  + WR
Subjt:  PYGAAIMPMYFPMSKRGRLARTTSFLVKHSSTAADEDITTASLDPRRRDITGPYLAERFWKFRCSGFFKRWR

RZB97672.1 Telomere repeat-binding factor 5 isoform D [Glycine soja]7.4e-0441.67Show/hide
Query:  PYGAAIMPMYFPMSKRGRLARTTSFLVKHSSTAADEDITTASLDPRRRDITGPYLAERFWKFRCSGFFKRWR
        P G  ++   F   + G LA TTSFLVKHS     E+ TT   +P  R++  PYL ER  K R  G  + WR
Subjt:  PYGAAIMPMYFPMSKRGRLARTTSFLVKHSSTAADEDITTASLDPRRRDITGPYLAERFWKFRCSGFFKRWR

TrEMBL top hitse value%identityAlignment
A0A0A0KGE7 Uncharacterized protein2.6e-1048.11Show/hide
Query:  KSPGFDTPAIATISLINSLNLLASSSFVTSSP------------------------------------FRTNRFTSSLRISANSLIRDKEKISMAPIRRR
        KSPGFDTP I TI LI+SL+ LASS+ +TSSP                                    F +N  TSS R+ AN L RD EKISMAPIRRR
Subjt:  KSPGFDTPAIATISLINSLNLLASSSFVTSSP------------------------------------FRTNRFTSSLRISANSLIRDKEKISMAPIRRR

Query:  FRQWSP
        FRQWSP
Subjt:  FRQWSP

A0A0A0LR56 Uncharacterized protein4.7e-1243.8Show/hide
Query:  FDTPAIATISLINSLNLLASSSFVTSSPFRT---------NRFTSSLRISANSLIRDKEKISMAPIRRRFRQWSPYG--AAIMPMY---FPMSKRGRLAR
        F    + TI  + S N+ +SS+   +S   T         NRFTSS  I  N L    EKIS   +RRR RQ SPYG  A+ + +Y   FP+ K GR AR
Subjt:  FDTPAIATISLINSLNLLASSSFVTSSPFRT---------NRFTSSLRISANSLIRDKEKISMAPIRRRFRQWSPYG--AAIMPMY---FPMSKRGRLAR

Query:  TTSFLVKHSSTAADEDITTASLDPRRRDITGPYLAER
          SF VKHS TA  +DITT   +P RR+ T PY  ER
Subjt:  TTSFLVKHSSTAADEDITTASLDPRRRDITGPYLAER

A0A7J6FT50 Uncharacterized protein7.0e-1636.56Show/hide
Query:  FWYRSGLKLMGSSHSFESLCMAQALTSTIVPRG---TSDRVP--ILVEKASDRSSCSFLLPSSFGVHQLAPARTHPLSSPIELISFQDHSRSSSIWKSP-
        F  R  + LMG  + +++ C     T  I+ R    TS  +   I+    S  SSCS L+ S    H +     HP   P +  +  D  +  ++  SP 
Subjt:  FWYRSGLKLMGSSHSFESLCMAQALTSTIVPRG---TSDRVP--ILVEKASDRSSCSFLLPSSFGVHQLAPARTHPLSSPIELISFQDHSRSSSIWKSP-

Query:  GFDTPAIATISLINSLNLLA----SSSFVTSSPFRTNRFTSSLRISANSLIRDKEKISMAPIRRRFRQWSPYGAAIMPMYFPMSKRGRLARTTSFLVKHS
        G +      +S ++S NL+     + +F++    R +  TSSL I      R +EKISMAP+RRR RQWSPYG       FP  + GRLA+T SFLVKHS
Subjt:  GFDTPAIATISLINSLNLLA----SSSFVTSSPFRTNRFTSSLRISANSLIRDKEKISMAPIRRRFRQWSPYGAAIMPMYFPMSKRGRLARTTSFLVKHS

Query:  STAADEDITTASLDPRRRDITGPYLAE
        STA  +D  T   DP  R+ T PYL E
Subjt:  STAADEDITTASLDPRRRDITGPYLAE

A0A7J6G3Z8 Uncharacterized protein4.5e-1547.46Show/hide
Query:  ISLINSLNLLA----SSSFVTSSPFRTNRFTSSLRISANSLIRDKEKISMAPIRRRFRQWSPYGAAIMPMYFPMSKRGRLARTTSFLVKHSSTAADEDIT
        +S ++S NL+     + +F++    R +  TSSL I      R +EKISMAP+RRR RQWSPYG       FP  + GRLA+T SFLVKHSSTA  +D  
Subjt:  ISLINSLNLLA----SSSFVTSSPFRTNRFTSSLRISANSLIRDKEKISMAPIRRRFRQWSPYGAAIMPMYFPMSKRGRLARTTSFLVKHSSTAADEDIT

Query:  TASLDPRRRDITGPYLAE
        T   DP  R+ T PYL E
Subjt:  TASLDPRRRDITGPYLAE

A0A7J6H1G4 Uncharacterized protein4.6e-0748.15Show/hide
Query:  IRPITLCAMADPGQARLPTPKGNNLCTSTAS--DFWYRSGLKLMGSSHSFESLCMAQALTSTIVPRGTSDRVPILVEKASD
        ++PI   A   PGQARLP+P G +L  S  S   F   SG+KL  S H+ ESLC+A ALT+ IVPRGTS   P++V+   +
Subjt:  IRPITLCAMADPGQARLPTPKGNNLCTSTAS--DFWYRSGLKLMGSSHSFESLCMAQALTSTIVPRGTSDRVPILVEKASD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAAGGTTGCTGATGATGGGACGAGCTTTGCACATGGCCTCCAGTGGCACCATCTTGGTCATTGTGGCACCACTCCGCTCACTCATATCGATGTCTTCTTCTCCAATCT
TCTCCCACTCAAAGCATTGAATCAGATTAGACCCATCACTCTGTGCGCCATGGCAGACCCAGGACAAGCTCGTCTCCCTACTCCAAAAGGCAACAACTTGTGTACCTCCA
CGGCTTCTGACTTTTGGTATCGCTCTGGTTTGAAACTTATGGGATCCTCCCATTCATTTGAATCCCTATGTATGGCCCAGGCATTGACTAGTACCATCGTACCGCGCGGC
ACATCTGATCGGGTTCCGATTCTTGTAGAGAAAGCAAGTGATCGATCATCGTGTTCCTTCCTTCTTCCTTCTTCCTTCGGTGTTCATCAATTAGCCCCTGCAAGAACGCA
TCCACTTTCTTCCCCAATTGAATTAATTTCCTTTCAAGACCATTCGAGATCCAGTTCAATATGGAAATCCCCTGGATTTGATACTCCTGCTATCGCCACAATCTCTTTAA
TTAACTCCCTGAATCTCCTCGCCTCTTCTTCGTTCGTCACGTCCTCGCCTTTTCGCACCAATCGATTCACTTCATCCCTCCGGATATCGGCGAATTCGTTGATTCGAGAT
AAAGAGAAGATTTCAATGGCGCCTATTCGACGAAGGTTCCGCCAGTGGTCGCCGTACGGAGCCGCAATCATGCCGATGTATTTTCCAATGAGCAAACGCGGACGGTTGGC
GAGAACAACGTCGTTTTTAGTGAAGCACTCCTCCACCGCCGCCGACGAGGATATAACGACTGCGAGCTTAGATCCGAGGCGGAGAGACATAACAGGGCCATATTTGGCAG
AGAGGTTTTGGAAATTTCGGTGTAGTGGCTTTTTCAAGAGATGGAGA
mRNA sequenceShow/hide mRNA sequence
AAGAAGGTTGCTGATGATGGGACGAGCTTTGCACATGGCCTCCAGTGGCACCATCTTGGTCATTGTGGCACCACTCCGCTCACTCATATCGATGTCTTCTTCTCCAATCT
TCTCCCACTCAAAGCATTGAATCAGATTAGACCCATCACTCTGTGCGCCATGGCAGACCCAGGACAAGCTCGTCTCCCTACTCCAAAAGGCAACAACTTGTGTACCTCCA
CGGCTTCTGACTTTTGGTATCGCTCTGGTTTGAAACTTATGGGATCCTCCCATTCATTTGAATCCCTATGTATGGCCCAGGCATTGACTAGTACCATCGTACCGCGCGGC
ACATCTGATCGGGTTCCGATTCTTGTAGAGAAAGCAAGTGATCGATCATCGTGTTCCTTCCTTCTTCCTTCTTCCTTCGGTGTTCATCAATTAGCCCCTGCAAGAACGCA
TCCACTTTCTTCCCCAATTGAATTAATTTCCTTTCAAGACCATTCGAGATCCAGTTCAATATGGAAATCCCCTGGATTTGATACTCCTGCTATCGCCACAATCTCTTTAA
TTAACTCCCTGAATCTCCTCGCCTCTTCTTCGTTCGTCACGTCCTCGCCTTTTCGCACCAATCGATTCACTTCATCCCTCCGGATATCGGCGAATTCGTTGATTCGAGAT
AAAGAGAAGATTTCAATGGCGCCTATTCGACGAAGGTTCCGCCAGTGGTCGCCGTACGGAGCCGCAATCATGCCGATGTATTTTCCAATGAGCAAACGCGGACGGTTGGC
GAGAACAACGTCGTTTTTAGTGAAGCACTCCTCCACCGCCGCCGACGAGGATATAACGACTGCGAGCTTAGATCCGAGGCGGAGAGACATAACAGGGCCATATTTGGCAG
AGAGGTTTTGGAAATTTCGGTGTAGTGGCTTTTTCAAGAGATGGAGA
Protein sequenceShow/hide protein sequence
KKVADDGTSFAHGLQWHHLGHCGTTPLTHIDVFFSNLLPLKALNQIRPITLCAMADPGQARLPTPKGNNLCTSTASDFWYRSGLKLMGSSHSFESLCMAQALTSTIVPRG
TSDRVPILVEKASDRSSCSFLLPSSFGVHQLAPARTHPLSSPIELISFQDHSRSSSIWKSPGFDTPAIATISLINSLNLLASSSFVTSSPFRTNRFTSSLRISANSLIRD
KEKISMAPIRRRFRQWSPYGAAIMPMYFPMSKRGRLARTTSFLVKHSSTAADEDITTASLDPRRRDITGPYLAERFWKFRCSGFFKRWR