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CaUC01G016660 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G016660
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr01:30081769..30084958
RNA-Seq ExpressionCaUC01G016660
SyntenyCaUC01G016660
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR027854 - Short transmembrane mitochondrial protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594998.1 hypothetical protein SDJN03_11551, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2083.87Show/hide
Query:  KRRTLMGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
        +R T MGFIRSSFSF+ GTV G+YVAQNY+VPNIRKLANTG++MAKHIEENYRKPKKREDDD
Subjt:  KRRTLMGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
KAG7034311.1 hypothetical protein SDJN02_04038, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-2387.69Show/hide
Query:  LRRKRRTLMGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
        LRRKRRT MG IRS FS +AGTV+G+Y+AQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
Subjt:  LRRKRRTLMGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
XP_022132505.1 uncharacterized protein LOC111005345 [Momordica charantia]5.2e-2191.23Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
        MGFIRSSFSF+AGTV+G+YVAQNYNVPNIRKLANTGLV+AKHIEENYRKPKKR+DDD
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
XP_038882745.1 uncharacterized protein LOC120073906 [Benincasa hispida]4.7e-2296.49Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
        MGFIRSSFSF+AGTVIG+YVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
XP_038882750.1 uncharacterized protein LOC120073907 [Benincasa hispida]8.8e-2191.23Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
        MGFIRSSFSF+ GTV G+Y+AQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
TrEMBL top hitse value%identityAlignment
A0A1S3B1N0 uncharacterized protein LOC1034848241.2e-2089.47Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
        MGFIRSSFSF+AG+V G+YVAQNYNVPNIRKLANTGL MAKHIEENYRKPKKR+DDD
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
A0A5D3CR66 Uncharacterized protein1.2e-2089.47Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
        MGFIRSSFSF+AG+V G+YVAQNYNVPNIRKLANTGL MAKHIEENYRKPKKR+DDD
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
A0A6J1BSM8 uncharacterized protein LOC1110053452.5e-2191.23Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
        MGFIRSSFSF+AGTV+G+YVAQNYNVPNIRKLANTGLV+AKHIEENYRKPKKR+DDD
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
A0A6J1HHR2 uncharacterized protein LOC1114636302.8e-2087.72Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
        MGFIRSSFSF+ GTV G+YVAQNY+VPNIRKLANTG++MAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
A0A6J1KVJ8 uncharacterized protein LOC1114968252.8e-2087.72Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
        MGFIRSSFSF+ GTV G+YVAQNY+VPNIRKLANTG++MAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35736.1 unknown protein8.8e-1978.85Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKK
        MG  RS FSF+ G+V GVY+AQNYNVPNIRKL NTGLV+AKH+EENYRKPKK
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKK
AT2G35736.2 unknown protein8.8e-1978.85Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKK
        MG  RS FSF+ G+V GVY+AQNYNVPNIRKL NTGLV+AKH+EENYRKPKK
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKK
AT4G25225.1 unknown protein1.2e-1565.45Show/hide
Query:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKRED
        MG IRSSFSF+ GTV G+Y+AQ YNVPNI+KL +  + MAK +EE YRKPK R+D
Subjt:  MGFIRSSFSFVAGTVIGVYVAQNYNVPNIRKLANTGLVMAKHIEENYRKPKKRED

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCAAGTTGGAGCCGCACGCAGCCCGATCCGCTTCTTCTCTTCCATCACGTTTTTCTCCTCCTTCTAAGATCTCTAAGAACTCTCTCGGAACTCTCTTCAACGAG
GAAGCTGCCGGCCAGAGAACCCACGCGCAACACCGCTCAGCACCAGTCTCCGCTGTCGCGCTCCGCCTCGCCTTCGTCATCGCTGCGGTCCTCGATCGTCGGTCG
TTCACGCGCAGACGGCTCCGACGAAAGCGAAGGACGTTGATGGGCTTTATCAGAAGTAGCTTCTCCTTTGTAGCGGGTACTGTGATCGGGGTTTACGTGGCTCAA
AATTACAACGTTCCCAACATCAGGAAGCTCGCCAATACCGGGCTTGTGATGGCCAAGCACATCGAAGAGAATTATAGGAAGCCAAAGAAGAGGGAGGATGATGAT
TGA
mRNA sequenceShow/hide mRNA sequence
ATCAAGTTGGAGCCGCACGCAGCCCGATCCGCTTCTTCTCTTCCATCACGTTTTTCTCCTCCTTCTAAGATCTCTAAGAACTCTCTCGGAACTCTCTTCAACGAG
GAAGCTGCCGGCCAGAGAACCCACGCGCAACACCGCTCAGCACCAGTCTCCGCTGTCGCGCTCCGCCTCGCCTTCGTCATCGCTGCGGTCCTCGATCGTCGGTCG
TTCACGCGCAGACGGCTCCGACGAAAGCGAAGGACGTTGATGGGCTTTATCAGAAGTAGCTTCTCCTTTGTAGCGGGTACTGTGATCGGGGTTTACGTGGCTCAA
AATTACAACGTTCCCAACATCAGGAAGCTCGCCAATACCGGGCTTGTGATGGCCAAGCACATCGAAGAGAATTATAGGAAGCCAAAGAAGAGGGAGGATGATGAT
TGATTGGAAGACCTACAATTCAGATGTGATCTCTGTAGCCAAGTGGAGGTTCTTGATACTGGATAGTTGGAAACTTGAACCGCAGGTGGATCTTCTGCCCTTTTA
TATGCTTTGATAGTTTTCTATTATGATGTTGGTTTCATCACGGTCTTCACTATCGAAAAAGAAATATTGTGCCAATGGTAAGCAGGAATATTTGAGAAAGTAGGT
TTTTCCTCTATTGAAATATTCGATATTGGTTATAGTCAATGAGGTCTAACTTTTTGTTGGATTTCGAATTCCCCTGTTTAATTTTGTATTTTCAAATTCTATTTT
TAGACTGATTTTAGTTGATAA
Protein sequenceShow/hide protein sequence
IKLEPHAARSASSLPSRFSPPSKISKNSLGTLFNEEAAGQRTHAQHRSAPVSAVALRLAFVIAAVLDRRSFTRRRLRRKRRTLMGFIRSSFSFVAGTVIGVYVAQ
NYNVPNIRKLANTGLVMAKHIEENYRKPKKREDDD