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CaUC01G016680 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G016680
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLate embryogenesis abundant protein
Genome locationCiama_Chr01:30091344..30091613
RNA-Seq ExpressionCaUC01G016680
SyntenyCaUC01G016680
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12837.1 Late embryogenesis abundant protein, LEA-18 [Cucumis melo var. makuwa]9.2e-3287.78Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        M+KR+ADQ Q Q EE KSEREKERSEG+PLESSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

XP_016899224.1 PREDICTED: uncharacterized protein LOC107990449 [Cucumis melo]6.4e-3390Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        M+KREADQ Q Q EERKSEREKERSEG+PLESSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

XP_023003117.1 uncharacterized protein LOC111496824 [Cucurbita maxima]3.3e-2984.44Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        MDKREADQP+RQQ ERKSE ++ER EGIPLE+SPYVNYKDLEDYKNQAYG QGHL+PKP R GGGGG TDAPTLSGDA+ SSVINRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

XP_023518886.1 uncharacterized protein LOC111782271 [Cucurbita pepo subsp. pepo]1.3e-3086.52Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP
        MDKREADQP+RQQ ERKS  E+ER EGIPLE+SPYVNYKDLEDYKNQAYG QGHL+PKP RGGGGG TDAPTLSGDAV SSVINRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP

XP_038883215.1 uncharacterized protein LOC120074234 [Benincasa hispida]2.0e-3492.13Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP
        MDKRE DQ QRQQEERKS RE+ERSEGIPLESSPYVNYKDLEDYK+QAYGTQGHLQPKPGRG GGGPTDAPTLSGDA ASSVINRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP

TrEMBL top hitse value%identityAlignment
A0A0A0KGG1 Uncharacterized protein3.3e-2787.65Show/hide
Query:  MDKREADQPQRQQEE-RKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVAS
        M+KREADQ Q Q +E RKSEREKERSE IPLESSPYVNY+DLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDA A+
Subjt:  MDKREADQPQRQQEE-RKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVAS

A0A1S4DTA9 uncharacterized protein LOC1079904493.1e-3390Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        M+KREADQ Q Q EERKSEREKERSEG+PLESSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

A0A5D3CLL7 Late embryogenesis abundant protein, LEA-184.5e-3287.78Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        M+KR+ADQ Q Q EE KSEREKERSEG+PLESSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

A0A6J1HDU8 uncharacterized protein LOC1114630784.6e-2984.27Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP
        MDKREADQP+RQQ ERKS  E+ER EGIPLE+SPYVNYKDLEDYKNQAYG QGHL+ KP R GGGG TDAPTLSGDAV SSVINRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP

A0A6J1KLI9 uncharacterized protein LOC1114968241.6e-2984.44Show/hide
Query:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP
        MDKREADQP+RQQ ERKSE ++ER EGIPLE+SPYVNYKDLEDYKNQAYG QGHL+PKP R GGGGG TDAPTLSGDA+ SSVINRQGVP
Subjt:  MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 63.1e-0943.96Show/hide
Query:  QQEERKSEREKERSEGIPLES--SPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGVP
        Q++   +E+E +  +   LES  +PY++Y +LEDYK + YG QGH +PK G GGG   TDAPT SG           D  ++  INRQGVP
Subjt:  QQEERKSEREKERSEGIPLES--SPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGVP

AT2G23110.2 Late embryogenesis abundant protein, group 63.1e-0943.96Show/hide
Query:  QQEERKSEREKERSEGIPLES--SPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGVP
        Q++   +E+E +  +   LES  +PY++Y +LEDYK + YG QGH +PK G GGG   TDAPT SG           D  ++  INRQGVP
Subjt:  QQEERKSEREKERSEGIPLES--SPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGVP

AT2G23120.1 Late embryogenesis abundant protein, group 65.8e-0850.75Show/hide
Query:  ERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASS
        E+K+E+ K+    +P + SPY+    LEDYK +AYG +GH +P PG GGG   TDAPT SGDA A++
Subjt:  ERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASS

AT2G33690.1 Late embryogenesis abundant protein, group 63.5e-1356.45Show/hide
Query:  EKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSV
        + E  + +PLE+SPY  Y+D+EDYK  AYGT GH   KPG   GGG TDAPT SGDA  S++
Subjt:  EKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGCGCGAGGCCGATCAGCCGCAGCGGCAACAAGAGGAGAGGAAAAGCGAAAGGGAAAAGGAGAGATCAGAAGGCATTCCGTTGGAGAGCAGTCCGTAC
GTGAATTATAAAGACTTGGAAGATTACAAAAACCAAGCCTACGGAACTCAAGGCCATCTTCAGCCCAAGCCCGGCCGTGGCGGCGGCGGTGGTCCCACCGACGCC
CCCACTCTCTCCGGTGACGCCGTCGCTTCGTCGGTGATTAACCGCCAAGGAGTACCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGCGCGAGGCCGATCAGCCGCAGCGGCAACAAGAGGAGAGGAAAAGCGAAAGGGAAAAGGAGAGATCAGAAGGCATTCCGTTGGAGAGCAGTCCGTAC
GTGAATTATAAAGACTTGGAAGATTACAAAAACCAAGCCTACGGAACTCAAGGCCATCTTCAGCCCAAGCCCGGCCGTGGCGGCGGCGGTGGTCCCACCGACGCC
CCCACTCTCTCCGGTGACGCCGTCGCTTCGTCGGTGATTAACCGCCAAGGAGTACCCTGA
Protein sequenceShow/hide protein sequence
MDKREADQPQRQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGVP