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CaUC01G016740 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G016740
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr01:30142965..30143310
RNA-Seq ExpressionCaUC01G016740
SyntenyCaUC01G016740
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR026939 - ZNF706/At2g23090 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647516.1 hypothetical protein Csa_003813 [Cucumis sativus]4.7e-1488.46Show/hide
Query:  AGEGDLFFELGFQIIEVLSGFLVKMGGGNGQKAKMAREKNMEKLKAA-KGEF
        A EGDLFF LGFQI +VLSGFLVKMGGGNGQK+KMAREKNMEKLKAA KGEF
Subjt:  AGEGDLFFELGFQIIEVLSGFLVKMGGGNGQKAKMAREKNMEKLKAA-KGEF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTGGTCTGTGACCTTTATGCGGGCGAAGGCGATCTCTTCTTCGAATTAGGGTTTCAGATTATTGAGGTTCTCTCGGGATTCCTCGTAAAAATGGGAGGG
GGGAACGGGCAGAAAGCGAAGATGGCTCGCGAGAAGAACATGGAGAAGCTGAAAGCTGCTAAGGGCGAGTTTTCTCTCTCTAATTCTTCGCCTCTATTTATCGAC
AATTCTTTCTTTTTTGTCGTACTTTTGTTTGATTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTGGTCTGTGACCTTTATGCGGGCGAAGGCGATCTCTTCTTCGAATTAGGGTTTCAGATTATTGAGGTTCTCTCGGGATTCCTCGTAAAAATGGGAGGG
GGGAACGGGCAGAAAGCGAAGATGGCTCGCGAGAAGAACATGGAGAAGCTGAAAGCTGCTAAGGGCGAGTTTTCTCTCTCTAATTCTTCGCCTCTATTTATCGAC
AATTCTTTCTTTTTTGTCGTACTTTTGTTTGATTTCTGA
Protein sequenceShow/hide protein sequence
MSLVCDLYAGEGDLFFELGFQIIEVLSGFLVKMGGGNGQKAKMAREKNMEKLKAAKGEFSLSNSSPLFIDNSFFFVVLLFDF