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CaUC01G017780 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G017780
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description3-ketoacyl-CoA synthase
Genome locationCiama_Chr01:31210098..31215695
RNA-Seq ExpressionCaUC01G017780
SyntenyCaUC01G017780
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0102756 - very-long-chain 3-ketoacyl-CoA synthase activity (molecular function)
InterPro domainsIPR013601 - FAE1/Type III polyketide synthase-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049314.1 3-ketoacyl-CoA synthase 20-like [Cucumis melo var. makuwa]5.6e-0868Show/hide
Query:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Subjt:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
XP_008438597.1 PREDICTED: 3-ketoacyl-CoA synthase 20-like [Cucumis melo]5.6e-0868Show/hide
Query:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Subjt:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
XP_022924722.1 3-ketoacyl-CoA synthase 11-like [Cucurbita moschata]7.3e-0868Show/hide
Query:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Subjt:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
XP_022979387.1 3-ketoacyl-CoA synthase 11-like [Cucurbita maxima]7.3e-0868Show/hide
Query:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Subjt:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
XP_038900907.1 LOW QUALITY PROTEIN: 3-ketoacyl-CoA synthase 20 [Benincasa hispida]7.3e-0871.74Show/hide
Query:  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Subjt:  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
TrEMBL top hitse value%identityAlignment
A0A1S3AWF2 3-ketoacyl-CoA synthase2.7e-0868Show/hide
Query:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Subjt:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
A0A2C9UCE8 3-ketoacyl-CoA synthase4.6e-0868.09Show/hide
Query:  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
        SF EENLGFQKKILER GL +KTYLPEAV+RV  NPC+ +  +E +T
Subjt:  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
A0A5D3D1Z6 3-ketoacyl-CoA synthase 20-like2.7e-0868Show/hide
Query:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Subjt:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
A0A6J1E9S5 3-ketoacyl-CoA synthase3.5e-0868Show/hide
Query:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Subjt:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
A0A6J1INL8 3-ketoacyl-CoA synthase3.5e-0868Show/hide
Query:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        E   SF EENLGFQKKILER GL EKTYLPEAVMRV  NPC+ +  +E +
Subjt:  EAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
SwissProt top hitse value%identityAlignment
O48780 3-ketoacyl-CoA synthase 113.4e-0859.57Show/hide
Query:  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
        SF EENL FQ+KIL+R GL E TYLPEAV+ V  NPC+ +  +E +T
Subjt:  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
Q5XEP9 3-ketoacyl-CoA synthase 27.6e-0856.52Show/hide
Query:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
        F E+NL FQ+KILER GL +KTY PEA++RV  NPC+ +  +E +T
Subjt:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
Q9FG87 3-ketoacyl-CoA synthase 209.9e-0856.52Show/hide
Query:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
        F E+NL FQ+KILER GL +KTY PEA++RV  NPC+ +  +E +T
Subjt:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
Q9SIX1 3-ketoacyl-CoA synthase 95.1e-0451.11Show/hide
Query:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        F E +L FQ+KILER GL E+TYLPEA+  +   P +M   EE +
Subjt:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
Arabidopsis top hitse value%identityAlignment
AT1G04220.1 3-ketoacyl-CoA synthase 25.4e-0956.52Show/hide
Query:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
        F E+NL FQ+KILER GL +KTY PEA++RV  NPC+ +  +E +T
Subjt:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
AT2G16280.1 3-ketoacyl-CoA synthase 93.6e-0551.11Show/hide
Query:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
        F E +L FQ+KILER GL E+TYLPEA+  +   P +M   EE +
Subjt:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGK
AT2G26640.1 3-ketoacyl-CoA synthase 112.4e-0959.57Show/hide
Query:  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
        SF EENL FQ+KIL+R GL E TYLPEAV+ V  NPC+ +  +E +T
Subjt:  SFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
AT5G43760.1 3-ketoacyl-CoA synthase 207.0e-0956.52Show/hide
Query:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT
        F E+NL FQ+KILER GL +KTY PEA++RV  NPC+ +  +E +T
Subjt:  FIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACCTACGAAAGTGGGACGTTTCTCCACAAATCGAAGCTCAATGGAGTTTTATAGAGGAGAATTTGGGGTTCCAAAAGAAGATTCTTGAGCGAAAGGGTTTGAG
GGAGAAGACTTACTTGCCAGAGGCGGTGATGAGGGTGTCGTCGAATCCTTGTTTGATGAAAAAAGAAGAAGAGGGGAAAACAGCGTCGACACCGAACAGGGAGGAGTGTC
AAAAGAGGAGGTTGGGAGCAATAAAAAAACAACATACTTATCAAACGCATCCACCAGCATGGAATTTCAGAGAACAGACCTCTATAAGAGCATCACGTTTCTTGAGCTCC
TCCTCAAGCTTCTTGCTTACTGCAGAAGAATCCATGCTATCTCCAGTGGCCTTGGATGGTTCTGTGCTCAATGACGATCTAACTTCATTCACTTGTGACTCTATGCTTTT
AATCTTTGACTACATGGAGAAAAAATTGTACCATTTCCATCAATACAAAAATAATGGACTTACAAATTATTCAGTTTTTCTGCAAGTGAAATGTTCTCCATCTGCATCAT
ATAGAACACAACTCAGCGACTTTGCTGCTGGAAGAAGTGATATGACAAAACTAATATCAACACTTAATACAGCATTCCGTGCTCTTGCGGAGAAGTTTAATGATGATAGC
GTCTCTGACAGATTTGAAGCATTGGGGCAGAGGTGGACAATCATCAAAGTTTTCGAATTCCCGCCTGCATTAATTGAACCCGTTAAGCAAAAGGAACCAGGTCTACCTCA
TTCCAGCAGCCTTCGGATAACGATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACCTACGAAAGTGGGACGTTTCTCCACAAATCGAAGCTCAATGGAGTTTTATAGAGGAGAATTTGGGGTTCCAAAAGAAGATTCTTGAGCGAAAGGGTTTGAG
GGAGAAGACTTACTTGCCAGAGGCGGTGATGAGGGTGTCGTCGAATCCTTGTTTGATGAAAAAAGAAGAAGAGGGGAAAACAGCGTCGACACCGAACAGGGAGGAGTGTC
AAAAGAGGAGGTTGGGAGCAATAAAAAAACAACATACTTATCAAACGCATCCACCAGCATGGAATTTCAGAGAACAGACCTCTATAAGAGCATCACGTTTCTTGAGCTCC
TCCTCAAGCTTCTTGCTTACTGCAGAAGAATCCATGCTATCTCCAGTGGCCTTGGATGGTTCTGTGCTCAATGACGATCTAACTTCATTCACTTGTGACTCTATGCTTTT
AATCTTTGACTACATGGAGAAAAAATTGTACCATTTCCATCAATACAAAAATAATGGACTTACAAATTATTCAGTTTTTCTGCAAGTGAAATGTTCTCCATCTGCATCAT
ATAGAACACAACTCAGCGACTTTGCTGCTGGAAGAAGTGATATGACAAAACTAATATCAACACTTAATACAGCATTCCGTGCTCTTGCGGAGAAGTTTAATGATGATAGC
GTCTCTGACAGATTTGAAGCATTGGGGCAGAGGTGGACAATCATCAAAGTTTTCGAATTCCCGCCTGCATTAATTGAACCCGTTAAGCAAAAGGAACCAGGTCTACCTCA
TTCCAGCAGCCTTCGGATAACGATATAA
Protein sequenceShow/hide protein sequence
MEDLRKWDVSPQIEAQWSFIEENLGFQKKILERKGLREKTYLPEAVMRVSSNPCLMKKEEEGKTASTPNREECQKRRLGAIKKQHTYQTHPPAWNFREQTSIRASRFLSS
SSSFLLTAEESMLSPVALDGSVLNDDLTSFTCDSMLLIFDYMEKKLYHFHQYKNNGLTNYSVFLQVKCSPSASYRTQLSDFAAGRSDMTKLISTLNTAFRALAEKFNDDS
VSDRFEALGQRWTIIKVFEFPPALIEPVKQKEPGLPHSSSLRITI