CuGenDBv2

Gene ID	CaUC01G018360
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein TAPETUM DETERMINANT 1-like
Genome location	Ciama_Chr01:31746635..31747843
RNA-Seq Expression	CaUC01G018360
Synteny	CaUC01G018360
Gene Ontology terms	NA
InterPro domains	IPR040361 - Tapetum determinant 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-44

68.12

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        MA F+KL  ALLF+SL+  G                NCQC+ N+I ISQ+M+GFQIHGMT+W VTISNNCLCSQSEVK+DCKGFQTT+SIDPSILA++DT
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
        ECLVNNGLPIF S P+ FTYA+DPKFDF  ISSQI+CS
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

XP_008440637.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Cucumis melo]

6.6e-45

69.57

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        MAI VKL+ ALL LS ISTG                NCQC+LNNITISQ+M+GFQIHGMT+W VTI+NNC+CSQS++K+DCKGF TT SIDPSIL+ISD 
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
        ECLVNNG PIF+SKPITF YA+ PKF+F PISSQISCS
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

XP_023518832.1 uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo]

3.1e-42

65.22

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        MA F  L  ALLF+SL+  G                N QC+ N+I ISQ+M+GFQIHGMT+W VTISNNCLCSQSEVK+DC+GFQTT+S+DPSILA++DT
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
        ECLVNNGLPIF S P+ FTYA+DPKFDF  ISSQI+CS
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

XP_031742370.1 uncharacterized protein At1g05835-like [Cucumis sativus]

1.5e-44

68.84

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        M IF KL+ ALL LSLISTG                NCQC LNNI ISQ M+GFQIHGMT+WKVTI+NNC+CSQS++K+DCKGF TT SIDPSILAISD+
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
        ECLVNNG PIF+S+PITF YA+ PKF+F P+SSQISCS
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]

2.1e-51

76.81

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        MAIFVKLVTALL LSL+STG                NCQC+LNNITISQRM+GFQIHGMT+WKVTISNNC CSQSEVK+DCKGFQTTESIDPSILA+ DT
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
        ECLVNNGLPIF+S PITF+YA+DP+F+F PISSQISCS
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLZ6 Uncharacterized protein

7.1e-45

68.84

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        M IF KL+ ALL LSLISTG                NCQC LNNI ISQ M+GFQIHGMT+WKVTI+NNC+CSQS++K+DCKGF TT SIDPSILAISD+
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
        ECLVNNG PIF+S+PITF YA+ PKF+F P+SSQISCS
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like

3.2e-45

69.57

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        MAI VKL+ ALL LS ISTG                NCQC+LNNITISQ+M+GFQIHGMT+W VTI+NNC+CSQS++K+DCKGF TT SIDPSIL+ISD 
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
        ECLVNNG PIF+SKPITF YA+ PKF+F PISSQISCS
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like

3.2e-45

69.57

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        MAI VKL+ ALL LS ISTG                NCQC+LNNITISQ+M+GFQIHGMT+W VTI+NNC+CSQS++K+DCKGF TT SIDPSIL+ISD 
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
        ECLVNNG PIF+SKPITF YA+ PKF+F PISSQISCS
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

A0A6J1HGA0 uncharacterized protein At1g05835-like

2.8e-41

64.49

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        MA   KL  ALLF+S +S                  N QC L+NITI Q M+GFQIHGMT+W  T+SNNCLCSQSEVK+DC+GFQTT+SIDP ILAI+DT
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
        ECLVNNGLPIF+S PITFTYA++P+F+F PISSQI+CS
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like

3.3e-42

65.94

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        MA F KL  ALLF+SL+  G                NCQC+ N+I I Q MSGFQIHGMT+W VTISN CLCSQSEVK+DC+GFQTT+SIDPS+LA++D+
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
        ECLVNNGLPIF S  ITFTYA DPKFDF  ISSQI+CS
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

SwissProt top hits

e value

%identity

Alignment

A8MS78 Uncharacterized protein At1g05835

1.6e-04

28.4

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Query:  QWKVTISNNC-LCSQSEVKVDCKGFQTTESIDPS---ILAISDTECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISC
        +++V + N C +C    +++ C+GF  +  +DP+   +L+ S   C+VN+GLP+   + ++F Y+   +F   P+S    C
Subjt:  QWKVTISNNC-LCSQSEVKVDCKGFQTTESIDPS---ILAISDTECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISC

Arabidopsis top hits

e value

%identity

Alignment

AT1G05835.1 PHD finger protein

1.1e-05

28.4

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Query:  QWKVTISNNC-LCSQSEVKVDCKGFQTTESIDPS---ILAISDTECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISC
        +++V + N C +C    +++ C+GF  +  +DP+   +L+ S   C+VN+GLP+   + ++F Y+   +F   P+S    C
Subjt:  QWKVTISNNC-LCSQSEVKVDCKGFQTTESIDPS---ILAISDTECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISC

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein

7.9e-12

29.71

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Query:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT
        MA  +K    +L LS++S G+                C C    I I    +G +I G  +WKVT+ N C C Q  V + C GF   + + P +L     
Subjt:  MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDT

Query:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS
         CL+  G  + +     FTYA  P + F P+ S++  S
Subjt:  ECLVNNGLPIFSSKPITFTYARDPKFDFNPISSQISCS

Sequences

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CDS sequence

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ATGGCCATCTTCGTCAAGCTTGTCACTGCTCTTCTCTTCCTCTCTCTCATTTCCACTGGTATAAATATTAAATTTCGAGTCCATTTTGTCTTTTTCTTCCGTTATCGAAA
TTGCCAATGTTTATTGAACAACATAACGATCAGCCAAAGGATGAGTGGATTTCAGATCCATGGAATGACACAATGGAAAGTGACAATAAGCAACAACTGTTTGTGTTCTC
AGTCAGAGGTGAAAGTAGATTGCAAAGGATTTCAAACAACTGAAAGCATTGATCCTTCCATCTTGGCCATTTCTGATACTGAATGTTTGGTCAACAATGGCCTCCCAATT
TTCAGTTCCAAACCCATCACCTTCACTTATGCACGAGACCCTAAATTCGATTTCAACCCAATTTCCTCCCAGATTTCTTGTTCTTAA

mRNA sequence

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Protein sequence

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MAIFVKLVTALLFLSLISTGINIKFRVHFVFFFRYRNCQCLLNNITISQRMSGFQIHGMTQWKVTISNNCLCSQSEVKVDCKGFQTTESIDPSILAISDTECLVNNGLPI
FSSKPITFTYARDPKFDFNPISSQISCS

CaUC01G018360 (gene) of Watermelon (USVL246-FR2) v1 genome