; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G018660 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G018660
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr01:31964101..31966847
RNA-Seq ExpressionCaUC01G018660
SyntenyCaUC01G018660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS84030.1 Os03g0330900 [Oryza sativa Japonica Group]9.8e-1050Show/hide
Query:  VWKLTQRPESTVEASDSSHSGIVAGV-RWWHLVGLDGAETAKR--GWRK--------ESGF-RFEPLD-VGEERGGVTGALFDILRGGRLAG-KAEGKKM
        +WKL  RPESTVE SD SHSGIV+G  R    VGL GAETAK+   W+K        +SGF      D VG+E GGVTGAL +   GGRLA  +  G++ 
Subjt:  VWKLTQRPESTVEASDSSHSGIVAGV-RWWHLVGLDGAETAKR--GWRK--------ESGF-RFEPLD-VGEERGGVTGALFDILRGGRLAG-KAEGKKM

Query:  DSHR
        ++ R
Subjt:  DSHR
TrEMBL top hitse value%identityAlignment
A0A0P0VX05 Os03g0330900 protein4.8e-1050Show/hide
Query:  VWKLTQRPESTVEASDSSHSGIVAGV-RWWHLVGLDGAETAKR--GWRK--------ESGF-RFEPLD-VGEERGGVTGALFDILRGGRLAG-KAEGKKM
        +WKL  RPESTVE SD SHSGIV+G  R    VGL GAETAK+   W+K        +SGF      D VG+E GGVTGAL +   GGRLA  +  G++ 
Subjt:  VWKLTQRPESTVEASDSSHSGIVAGV-RWWHLVGLDGAETAKR--GWRK--------ESGF-RFEPLD-VGEERGGVTGALFDILRGGRLAG-KAEGKKM

Query:  DSHR
        ++ R
Subjt:  DSHR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAAGCAGCTCTGTTGAATTTGACAAAACAGATTGTTAACAATTCTGAGAGGAACACCGAATGTTATCCTTTCCCGGGCCTTGACTCAAATATTGATTGCTCTTC
CAGTATAAGATGTCACAAGTTCAGATTTTTGCAAGGGCTCCAAGGGAAAGGAACTGTTCAAATGAAGGCAAACCAGGGTCGGGGATGCTTAACCACGGGCCTTCCCACCC
CCAAGAGTAAGCTCCAAATCATCCACCCCAACTTCATGAATTCTCTCACCCTCCCATGGCTTCACTGTGCCACTCTCAAATTTCTCAAATTCAAACTCAGAGCCTCGTCC
CCTATCAGATGTAGCACCCCAGCCCATTGCTCCATATTAAATGTAGGGGAAGGAGGAGCAACAGAAGGTGCCACAGTCTGGAAACTGACCCAGCGGCCAGAGTCTACAGT
TGAAGCATCAGACTCATCACATTCTGGAATTGTTGCGGGTGTAAGATGGTGGCATCTTGTAGGACTTGATGGAGCAGAGACAGCAAAGAGGGGATGGCGGAAAGAGTCGG
GCTTTCGCTTCGAACCCCTTGACGTCGGGGAAGAAAGAGGTGGTGTGACAGGTGCACTGTTCGATATTCTGAGAGGAGGGAGATTAGCAGGAAAGGCAGAAGGTAAGAAG
ATGGATTCCCATCGAATCGAGTTGGGCTTGGAAAAGAGGATGAAGAAGGACTGGCATGGTAGGATGGTACAGGACTGGGGAAGCATGAAGATTGTGGGCTTGGTTGAAGA
GAAGAACAGGCACTCATATTTGCAGAAGTGCCAATATCAATCGGAGGTGGCTTGCATCCCTGTACAAGGCAACAACACAAAAGAACTTCGCAGATTTGGACAGATCAACT
GCTTAAGAATTCTGGATCTAAAAGAGGAAACAACAACGCTGCTTTCTCATTTAGGCCTCCGTCACTTACTCATTTCCTCAAAACAACAGATTCTTAAATTCTCGATTCCC
CAAATATCCAGATCTAAGAAAATAAAGACACAGAACCAAAGACGAAACGCGCAACAATGGCTCTCCGTCGCCTCTCTCTCCTCTTATTGTTCTCCCTTTCTTTCCACGTC
GGCGTCCTTCCCGATGACCCTCTGCCCGTCATGGCTTCTTCAGACAACAACAAATCGCTCTGCAGCAGCTTCCGATTCTTCAGTTCCGGCAATTCAGCTCCGCCGTGGAA
CTTCTTCTCATTCTCTCTCGCTTCCTAGGGTTTATTCTCGTTCTCGATCAGAGAGCGAATTTTCGATGGGGGGAAAGAGAGAGAGAGAGAAACAGAGCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAAGCAGCTCTGTTGAATTTGACAAAACAGATTGTTAACAATTCTGAGAGGAACACCGAATGTTATCCTTTCCCGGGCCTTGACTCAAATATTGATTGCTCTTC
CAGTATAAGATGTCACAAGTTCAGATTTTTGCAAGGGCTCCAAGGGAAAGGAACTGTTCAAATGAAGGCAAACCAGGGTCGGGGATGCTTAACCACGGGCCTTCCCACCC
CCAAGAGTAAGCTCCAAATCATCCACCCCAACTTCATGAATTCTCTCACCCTCCCATGGCTTCACTGTGCCACTCTCAAATTTCTCAAATTCAAACTCAGAGCCTCGTCC
CCTATCAGATGTAGCACCCCAGCCCATTGCTCCATATTAAATGTAGGGGAAGGAGGAGCAACAGAAGGTGCCACAGTCTGGAAACTGACCCAGCGGCCAGAGTCTACAGT
TGAAGCATCAGACTCATCACATTCTGGAATTGTTGCGGGTGTAAGATGGTGGCATCTTGTAGGACTTGATGGAGCAGAGACAGCAAAGAGGGGATGGCGGAAAGAGTCGG
GCTTTCGCTTCGAACCCCTTGACGTCGGGGAAGAAAGAGGTGGTGTGACAGGTGCACTGTTCGATATTCTGAGAGGAGGGAGATTAGCAGGAAAGGCAGAAGGTAAGAAG
ATGGATTCCCATCGAATCGAGTTGGGCTTGGAAAAGAGGATGAAGAAGGACTGGCATGGTAGGATGGTACAGGACTGGGGAAGCATGAAGATTGTGGGCTTGGTTGAAGA
GAAGAACAGGCACTCATATTTGCAGAAGTGCCAATATCAATCGGAGGTGGCTTGCATCCCTGTACAAGGCAACAACACAAAAGAACTTCGCAGATTTGGACAGATCAACT
GCTTAAGAATTCTGGATCTAAAAGAGGAAACAACAACGCTGCTTTCTCATTTAGGCCTCCGTCACTTACTCATTTCCTCAAAACAACAGATTCTTAAATTCTCGATTCCC
CAAATATCCAGATCTAAGAAAATAAAGACACAGAACCAAAGACGAAACGCGCAACAATGGCTCTCCGTCGCCTCTCTCTCCTCTTATTGTTCTCCCTTTCTTTCCACGTC
GGCGTCCTTCCCGATGACCCTCTGCCCGTCATGGCTTCTTCAGACAACAACAAATCGCTCTGCAGCAGCTTCCGATTCTTCAGTTCCGGCAATTCAGCTCCGCCGTGGAA
CTTCTTCTCATTCTCTCTCGCTTCCTAGGGTTTATTCTCGTTCTCGATCAGAGAGCGAATTTTCGATGGGGGGAAAGAGAGAGAGAGAGAAACAGAGCGTGTGA
Protein sequenceShow/hide protein sequence
MSEAALLNLTKQIVNNSERNTECYPFPGLDSNIDCSSSIRCHKFRFLQGLQGKGTVQMKANQGRGCLTTGLPTPKSKLQIIHPNFMNSLTLPWLHCATLKFLKFKLRASS
PIRCSTPAHCSILNVGEGGATEGATVWKLTQRPESTVEASDSSHSGIVAGVRWWHLVGLDGAETAKRGWRKESGFRFEPLDVGEERGGVTGALFDILRGGRLAGKAEGKK
MDSHRIELGLEKRMKKDWHGRMVQDWGSMKIVGLVEEKNRHSYLQKCQYQSEVACIPVQGNNTKELRRFGQINCLRILDLKEETTTLLSHLGLRHLLISSKQQILKFSIP
QISRSKKIKTQNQRRNAQQWLSVASLSSYCSPFLSTSASFPMTLCPSWLLQTTTNRSAAASDSSVPAIQLRRGTSSHSLSLPRVYSRSRSESEFSMGGKREREKQSV