; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G018890 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G018890
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr01:32124653..32129003
RNA-Seq ExpressionCaUC01G018890
SyntenyCaUC01G018890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9678324.1 hypothetical protein SADUNF_Sadunf07G0023100 [Salix dunnii]3.4e-0556.92Show/hide
Query:  GRRFLIDLCHPTFAMTGALAWQVN-YVNEKNDFWVLRRDRTGIARDPSSLVCAVSSLSLSLCILP
        GR  +  LCHP +AMTGALAWQVN Y+N+   F  LR DRTGI+R P  L+C VS   LS   LP
Subjt:  GRRFLIDLCHPTFAMTGALAWQVN-YVNEKNDFWVLRRDRTGIARDPSSLVCAVSSLSLSLCILP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAAGATATCAGGCCGAACCGTCCCTATATTATTAGGGAGGCGGTTTCTGATCGATCTTTGTCATCCGACCTTTGCCATGACAGGTGCGCTTGCATGGCAG
GTCAACTACGTTAATGAAAAAAATGATTTTTGGGTTTTGAGGAGGGATCGCACGGGGATTGCCCGGGATCCATCCTCTCTGGTGTGTGCCGTTTCCTCTCTTTCT
TTATCTCTCTGCATACTGCCTACAATTGCTTGCATCCTCAGGGATTGCTCGCTCGATCGTTCTTGCCCAACCTATGCTCGTTTCAAGAATAATATATTAACTCTG
ACTAATCTTCTACAATTTAGCCGGTATATAATCTTTGCTCGTGACTTAGCATCCTCCCGTTTATGGCAACTATATCTTTTAGGATCCTTTCACAACAAAAATGAG
TGTGTCGGAAATGCGGATGAAGAACCTGTTTTGGGCCGGGCCGTGGATTGTAAAGCTGGTTTGATCTTCGCCATTGCTGAGCTGTTGGATTTGCAGATCTCTGTT
AAGTTCTGGAATTTCAAGTGGAATCATTCTATCTTGATCTGTTCCTCAATGTTTTCTAAAAACTATAATACAAAAATTCGTATGTTTTCAGATTGTTATAATAAT
CAAGAACAACGGGAGAATACTTTTCTGGTTAGATTCATCAGTATATTTAAGAGCATCGCCTCCACGGAAGGCTCTAGTGGCATTGCAATTGAATTACAAACATGT
ACTGCAAATTCCTTGACTGGCCACGGTCCAATAATGTATAGTGGGCTCGTGGGTGAATTGGTCTGTACGTTGATGTTGTCTAATAACATAAGTGTTGTAGGATTT
GAAGATCAGCCGGTGGTGATTTTTAATTTCAACGTAAATGGTTTGTACGTTAGTTGTGTCAACGTCACTCTTAGATGTCATCTTAATGTGTGTGCATACTATTTG
CGTGGGACTAGAGATAGTCTTCAATTTCCTTGGAAGCACACATTGTTGACAAGAGATCGAATTTTGCCGAATTTGTCTTGTAGTAAAGATCCTGTACCCATCCCT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTATAAGATATCAGGCCGAACCGTCCCTATATTATTAGGGAGGCGGTTTCTGATCGATCTTTGTCATCCGACCTTTGCCATGACAGGTGCGCTTGCATGGCAG
GTCAACTACGTTAATGAAAAAAATGATTTTTGGGTTTTGAGGAGGGATCGCACGGGGATTGCCCGGGATCCATCCTCTCTGGTGTGTGCCGTTTCCTCTCTTTCT
TTATCTCTCTGCATACTGCCTACAATTGCTTGCATCCTCAGGGATTGCTCGCTCGATCGTTCTTGCCCAACCTATGCTCGTTTCAAGAATAATATATTAACTCTG
ACTAATCTTCTACAATTTAGCCGGTATATAATCTTTGCTCGTGACTTAGCATCCTCCCGTTTATGGCAACTATATCTTTTAGGATCCTTTCACAACAAAAATGAG
TGTGTCGGAAATGCGGATGAAGAACCTGTTTTGGGCCGGGCCGTGGATTGTAAAGCTGGTTTGATCTTCGCCATTGCTGAGCTGTTGGATTTGCAGATCTCTGTT
AAGTTCTGGAATTTCAAGTGGAATCATTCTATCTTGATCTGTTCCTCAATGTTTTCTAAAAACTATAATACAAAAATTCGTATGTTTTCAGATTGTTATAATAAT
CAAGAACAACGGGAGAATACTTTTCTGGTTAGATTCATCAGTATATTTAAGAGCATCGCCTCCACGGAAGGCTCTAGTGGCATTGCAATTGAATTACAAACATGT
ACTGCAAATTCCTTGACTGGCCACGGTCCAATAATGTATAGTGGGCTCGTGGGTGAATTGGTCTGTACGTTGATGTTGTCTAATAACATAAGTGTTGTAGGATTT
GAAGATCAGCCGGTGGTGATTTTTAATTTCAACGTAAATGGTTTGTACGTTAGTTGTGTCAACGTCACTCTTAGATGTCATCTTAATGTGTGTGCATACTATTTG
CGTGGGACTAGAGATAGTCTTCAATTTCCTTGGAAGCACACATTGTTGACAAGAGATCGAATTTTGCCGAATTTGTCTTGTAGTAAAGATCCTGTACCCATCCCT
TAA
Protein sequenceShow/hide protein sequence
MYKISGRTVPILLGRRFLIDLCHPTFAMTGALAWQVNYVNEKNDFWVLRRDRTGIARDPSSLVCAVSSLSLSLCILPTIACILRDCSLDRSCPTYARFKNNILTL
TNLLQFSRYIIFARDLASSRLWQLYLLGSFHNKNECVGNADEEPVLGRAVDCKAGLIFAIAELLDLQISVKFWNFKWNHSILICSSMFSKNYNTKIRMFSDCYNN
QEQRENTFLVRFISIFKSIASTEGSSGIAIELQTCTANSLTGHGPIMYSGLVGELVCTLMLSNNISVVGFEDQPVVIFNFNVNGLYVSCVNVTLRCHLNVCAYYL
RGTRDSLQFPWKHTLLTRDRILPNLSCSKDPVPIP