CuGenDBv2

Gene ID	CaUC01G019310
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	pleiotropic regulatory locus 1
Genome location	Ciama_Chr01:32410401..32410643
RNA-Seq Expression	CaUC01G019310
Synteny	CaUC01G019310
Gene Ontology terms	GO:0010467 - gene expression (biological process) GO:0034641 - cellular nitrogen compound metabolic process (biological process) GO:0044238 - primary metabolic process (biological process) GO:0043231 - intracellular membrane-bounded organelle (cellular component) GO:1902494 - catalytic complex (cellular component) GO:0005515 - protein binding (molecular function) GO:0097159 - organic cyclic compound binding (molecular function) GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAF3456238.1 hypothetical protein FNV43_RR00888 [Rhamnella rubrinervis]

9.2e-15

55.56

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Query:  QVVIALFFSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        Q  +   FSRPTDPQVVTGSHDSTI L++  +    +T+                  FASASADNIKKF+LPKGEF HNMLSQQ +IINA
Subjt:  QVVIALFFSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

XP_004296851.1 PREDICTED: protein pleiotropic regulatory locus 1 [Fragaria vesca subsp. vesca]

1.2e-14

59.04

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        F+RPTDPQVVTGSHDSTI  ++  +    STI                  FASASADNIKKFSLP+GEF+HNMLSQQ +IINA
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

XP_010684484.1 PREDICTED: protein pleiotropic regulatory locus 1 [Beta vulgaris subsp. vulgaris]

2.1e-14

57.32

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIIN
        F+RPTDPQVVTGSHDSTI  ++  H    +T+                  FASASADNIKKF+LPKGEF+HNMLSQQ +IIN
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIIN

XP_013463226.1 protein pleiotropic regulatory locus 1 [Medicago truncatula]

2.1e-14

57.83

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        F+RPTDPQVVTGSHDSTI +++  +    ST+                  FASASADNIKKF+LPKGEF HNMLSQQ +IINA
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

XP_024196921.1 protein pleiotropic regulatory locus 1 [Rosa chinensis]

1.2e-14

59.04

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        F+RPTDPQVVTGSHDSTI  ++  +    STI                  FASASADNIKKFSLP+GEF+HNMLSQQ +IINA
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

TrEMBL top hits

e value

%identity

Alignment

A0A072V5D5 PP1/PP2A phosphatase pleiotropic regulator PRL1

1.0e-14

57.83

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        F+RPTDPQVVTGSHDSTI +++  +    ST+                  FASASADNIKKF+LPKGEF HNMLSQQ +IINA
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

A0A0K9RK94 WD_REPEATS_REGION domain-containing protein

1.0e-14

58.33

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI------------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        FSRPTDPQVVTGSHDSTI  ++  H   + T                    FASASADNIKKF+LPKGEF+HNMLSQQ +IINA
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI------------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

A0A2P6QYP4 Putative transcription factor WD40-like family

5.8e-15

59.04

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        F+RPTDPQVVTGSHDSTI  ++  +    STI                  FASASADNIKKFSLP+GEF+HNMLSQQ +IINA
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

A0A6A3CGA5 Protein pleiotropic regulatory locus 1

1.0e-14

57.83

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        F+RPTDPQVVTGSHD+TI  ++  +    ST+                  FASASADNIKKFSLPKGEF+HNMLSQQ +IINA
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

A0A7J6VA41 Pleiotropic regulator PRL2

1.0e-14

57.83

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        F+RPTDPQVVTGSHDSTI  ++  +    +T+                  FASASADNIKKFSLPKGEF+HNMLSQQ +IINA
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

SwissProt top hits

e value

%identity

Alignment

O43660 Pleiotropic regulator 1

6.9e-05

34.83

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Query:  IALFFSRPTDPQVVTGSHDSTINLFEQWHNILSST--------------------IFFASASADNIKKFSLPKGEFVHNMLSQQNSIIN
        +A    +  +PQ++TGSHD+TI L   W  +   T                      FAS S DNIK++  P G F+ N LS  N+IIN
Subjt:  IALFFSRPTDPQVVTGSHDSTINLFEQWHNILSST--------------------IFFASASADNIKKFSLPKGEFVHNMLSQQNSIIN

Q2KID6 Pleiotropic regulator 1

6.9e-05

34.83

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Query:  IALFFSRPTDPQVVTGSHDSTINLFEQWHNILSST--------------------IFFASASADNIKKFSLPKGEFVHNMLSQQNSIIN
        +A    +  +PQ++TGSHD+TI L   W  +   T                      FAS S DNIK++  P G F+ N LS  N+IIN
Subjt:  IALFFSRPTDPQVVTGSHDSTINLFEQWHNILSST--------------------IFFASASADNIKKFSLPKGEFVHNMLSQQNSIIN

Q39190 Protein pleiotropic regulator PRL2

5.6e-15

54.88

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Query:  SRPTDPQVVTGSHDSTINLFEQWHNILSSTIF-----------------FASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        +RPTDPQV+TGSHDSTI  ++  +    +TI                  F SASADNIKKFSLPKGEF HNMLS Q  IINA
Subjt:  SRPTDPQVVTGSHDSTINLFEQWHNILSSTIF-----------------FASASADNIKKFSLPKGEFVHNMLSQQNSIINA

Q42384 Protein pleiotropic regulatory locus 1

1.7e-16

56.63

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        F+RPTDPQVVTGSHD+TI  ++  +    ST+                  FASASADN KKFSLPKGEF HNMLSQQ +IINA
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

Q922V4 Pleiotropic regulator 1

1.2e-04

34.83

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Query:  IALFFSRPTDPQVVTGSHDSTINLFEQWHNILSST--------------------IFFASASADNIKKFSLPKGEFVHNMLSQQNSIIN
        +A    +  +PQ++TGSHD+TI L   W  +   T                      FAS S DNIK++  P G F+ N LS  N+IIN
Subjt:  IALFFSRPTDPQVVTGSHDSTINLFEQWHNILSST--------------------IFFASASADNIKKFSLPKGEFVHNMLSQQNSIIN

Arabidopsis top hits

e value

%identity

Alignment

AT3G16650.1 Transducin/WD40 repeat-like superfamily protein

4.0e-16

54.88

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Query:  SRPTDPQVVTGSHDSTINLFEQWHNILSSTIF-----------------FASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        +RPTDPQV+TGSHDSTI  ++  +    +TI                  F SASADNIKKFSLPKGEF HNMLS Q  IINA
Subjt:  SRPTDPQVVTGSHDSTINLFEQWHNILSSTIF-----------------FASASADNIKKFSLPKGEFVHNMLSQQNSIINA

AT4G15900.1 pleiotropic regulatory locus 1

1.2e-17

56.63

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Query:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA
        F+RPTDPQVVTGSHD+TI  ++  +    ST+                  FASASADN KKFSLPKGEF HNMLSQQ +IINA
Subjt:  FSRPTDPQVVTGSHDSTINLFEQWHNILSSTI-----------------FFASASADNIKKFSLPKGEFVHNMLSQQNSIINA

Sequences

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CDS sequence

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ATGGTAACACAGGTTGTGATTGCTCTGTTTTTTTCTCGACCCACCGATCCACAGGTTGTGACTGGCTCCCATGACTCAACTATTAATCTATTCGAGCAATGGCAC
AACATCCTAAGCAGCACAATTTTTTTTGCATCTGCTTCAGCTGACAACATCAAGAAATTTAGCCTCCCCAAAGGGGAGTTTGTGCACAATATGCTTTCTCAGCAA
AACTCTATAATCAATGCCGATGGATGTCAATGA

mRNA sequence

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Protein sequence

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MVTQVVIALFFSRPTDPQVVTGSHDSTINLFEQWHNILSSTIFFASASADNIKKFSLPKGEFVHNMLSQQNSIINADGCQ

CaUC01G019310 (gene) of Watermelon (USVL246-FR2) v1 genome