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CaUC01G019460 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G019460
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr01:32513236..32515132
RNA-Seq ExpressionCaUC01G019460
SyntenyCaUC01G019460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV59216.1 hypothetical protein CFOL_v3_02747, partial [Cephalotus follicularis]9.5e-2269.15Show/hide
Query:  SISFLFCLNVAPSVLFFLPKQVLVNARHSSRFTSGTSFLGRMITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF
        S +F  CLNVAP+VLFF  K VLV A HSS+FTSG    GR+ITTDEST GQG KS LLTS+  STSAT+FTFTA  L SESPG A+NR ANSF
Subjt:  SISFLFCLNVAPSVLFFLPKQVLVNARHSSRFTSGTSFLGRMITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF

PON71519.1 hypothetical protein PanWU01x14_073160 [Parasponia andersonii]9.9e-1182.69Show/hide
Query:  ITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF
        +TT+ESTLGQG KS LLTS+TCSTSATSFTFTAKRL SESPG ANN  ANSF
Subjt:  ITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF

PON99546.1 hypothetical protein TorRG33x02_047130 [Trema orientale]9.9e-1182.69Show/hide
Query:  ITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF
        +TT+ESTLGQG KS LLTS+TCSTSATSFTFTAKRL SESPG ANN  ANSF
Subjt:  ITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF

TrEMBL top hitse value%identityAlignment
A0A0A0KGL1 Uncharacterized protein1.9e-4793.75Show/hide
Query:  MTISLKELNPSSEFECIRSISFLFCLNVAPSVLFFLPKQVLVNARHSSRFTSGTSFLGRMITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSES
        MT+SLKEL PS EFECIRSISFLFCLNVAPSVLFFLPKQVLVNARHSSRFTSGTSFLGR+ TTDESTLGQGTKS LLTSMTCSTSATSFT TAKRLYSES
Subjt:  MTISLKELNPSSEFECIRSISFLFCLNVAPSVLFFLPKQVLVNARHSSRFTSGTSFLGRMITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSES

Query:  PGSANNRRANSF
        PGSANNRRANSF
Subjt:  PGSANNRRANSF

A0A1Q3ATX8 Uncharacterized protein (Fragment)4.6e-2269.15Show/hide
Query:  SISFLFCLNVAPSVLFFLPKQVLVNARHSSRFTSGTSFLGRMITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF
        S +F  CLNVAP+VLFF  K VLV A HSS+FTSG    GR+ITTDEST GQG KS LLTS+  STSAT+FTFTA  L SESPG A+NR ANSF
Subjt:  SISFLFCLNVAPSVLFFLPKQVLVNARHSSRFTSGTSFLGRMITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF

A0A2P5DE18 Uncharacterized protein4.8e-1182.69Show/hide
Query:  ITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF
        +TT+ESTLGQG KS LLTS+TCSTSATSFTFTAKRL SESPG ANN  ANSF
Subjt:  ITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF

A0A2P5FP54 Uncharacterized protein4.8e-1182.69Show/hide
Query:  ITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF
        +TT+ESTLGQG KS LLTS+TCSTSATSFTFTAKRL SESPG ANN  ANSF
Subjt:  ITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTCTTCTCTACCATTCTGAATTATGATTCTTGTTCGTGCGTCGCCATCTTTTTGACAGTTCGAAGGGCTTCGTTAAATAACGCTAGCAAATGTAGCAAC
TCCTCATTACACAACTTCACAGGCCTCTTATCTTCAAAATCTCCGGATTTTAGAACCTGTATGACCATCTCCTTGAAGGAATTAAACCCCTCCTCTGAATTTGAG
TGCATAAGGTCCATCAGCTTCCTCTTCTGCTTGAATGTTGCCCCAAGTGTCTTATTCTTCTTGCCAAAGCAAGTTCTAGTGAACGCGCGCCACTCTTCCAGGTTC
ACTTCTGGAACTTCCTTCTTGGGGCGGATGATCACAACAGATGAGTCGACTTTAGGACAAGGAACAAAGTCCTTCTTGCTTACATCCATGACATGCTCCACATCA
GCCACCAGTTTCACATTTACAGCCAAACGATTGTACTCAGAGTCACCAGGATCCGCCAACAACCGCCGTGCAAACTCCTTC
mRNA sequenceShow/hide mRNA sequence
ATATAGCTAGACAGACCCACGAGGGGTCCTCTTTTTTAAGCCATAACTGTACTGATACAGGAATTTTAGTTTTACTTTACATGGAGCTCTTCTCTACCATTCTGA
ATTATGATTCTTGTTCGTGCGTCGCCATCTTTTTGACAGTTCGAAGGGCTTCGTTAAATAACGCTAGCAAATGTAGCAACTCCTCATTACACAACTTCACAGGCC
TCTTATCTTCAAAATCTCCGGATTTTAGAACCTGTATGACCATCTCCTTGAAGGAATTAAACCCCTCCTCTGAATTTGAGTGCATAAGGTCCATCAGCTTCCTCT
TCTGCTTGAATGTTGCCCCAAGTGTCTTATTCTTCTTGCCAAAGCAAGTTCTAGTGAACGCGCGCCACTCTTCCAGGTTCACTTCTGGAACTTCCTTCTTGGGGC
GGATGATCACAACAGATGAGTCGACTTTAGGACAAGGAACAAAGTCCTTCTTGCTTACATCCATGACATGCTCCACATCAGCCACCAGTTTCACATTTACAGCCA
AACGATTGTACTCAGAGTCACCAGGATCCGCCAACAACCGCCGTGCAAACTCCTTC
Protein sequenceShow/hide protein sequence
MELFSTILNYDSCSCVAIFLTVRRASLNNASKCSNSSLHNFTGLLSSKSPDFRTCMTISLKELNPSSEFECIRSISFLFCLNVAPSVLFFLPKQVLVNARHSSRF
TSGTSFLGRMITTDESTLGQGTKSFLLTSMTCSTSATSFTFTAKRLYSESPGSANNRRANSF