; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G019660 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G019660
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionHistone H1
Genome locationCiama_Chr01:32722369..32723922
RNA-Seq ExpressionCaUC01G019660
SyntenyCaUC01G019660
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647604.1 hypothetical protein Csa_003640 [Cucumis sativus]4.5e-7487.38Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEA           V+VPA EE KE EK PVKEKKPRA REKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAAK
        LALQLKNSTAKGKLTKIKASYKLSETGKKKD NATKVAKANAEKKTKQARTTRTTGRKRKAVK +E    A KKVVAKKPKRSTPAKPKQPKSIK+PAAK
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAAK

Query:  RAKKAV
        RAKKAV
Subjt:  RAKKAV

XP_004134874.1 histone H1 [Cucumis sativus]5.0e-8192.27Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        MSSTGE AEVKVPAEDV PVEVPA EE KE EK PVKEKKPRA REKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGE-AEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAA
        ILALQLKNSTAKGKLTKIKASYKLSETGKKKD NATKVAKANAEKKTKQARTTRTTGRKRKAVK +E    A KKVVAKKPKRSTPAKPKQPKSIK+PAA
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAA

Query:  KRAKKAV
        KRAKKAV
Subjt:  KRAKKAV

XP_008440801.1 PREDICTED: histone H1 [Cucumis melo]5.5e-8091.83Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVE-VPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
        M+STGE AEVKVPAEDV PVE VPA EE KE EK PVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
Subjt:  MSSTGE-AEVKVPAEDVPPVE-VPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR

Query:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA
        KILALQLKNSTAKGKLTKIKASYKLSE GKKKDKNATKVAKANAEK TKQARTTRTTGRKRKAVKK+E    A KKVVAKKPKRSTPAKPKQPKSIK+PA
Subjt:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA

Query:  AKRAKKAV
        AKRAKKAV
Subjt:  AKRAKKAV

XP_022950733.1 histone H1 [Cucurbita moschata]5.5e-7284.95Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEAEVKVPAED P VEVP+AEE KEAEK PV+EKK R PREKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR
        LALQLKNSTAKGKL KIKASY+LSE G KKDK A+KVAKANAEKKTKQARTTR T  KRK   A K  +A KKVVAKKPKR+TPAKPKQPKSI++PAAKR
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR

Query:  AKKAVA
        AKKAVA
Subjt:  AKKAVA

XP_038883821.1 histone H1 [Benincasa hispida]1.0e-8693.33Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSS GEAEVKVPAEDVPPV VPAAEE KEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAA-------KKVVAKKPKRSTPAKPKQPKSIKAP
        L+LQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAA       KKVVAKKPKRSTPAKPK PKSI++P
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAA-------KKVVAKKPKRSTPAKPKQPKSIKAP

Query:  AAKRAKKAVA
        AAKRAKKAVA
Subjt:  AAKRAKKAVA

TrEMBL top hitse value%identityAlignment
A0A0A0KJB6 Histone H12.4e-8192.27Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        MSSTGE AEVKVPAEDV PVEVPA EE KE EK PVKEKKPRA REKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGE-AEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAA
        ILALQLKNSTAKGKLTKIKASYKLSETGKKKD NATKVAKANAEKKTKQARTTRTTGRKRKAVK +E    A KKVVAKKPKRSTPAKPKQPKSIK+PAA
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAA

Query:  KRAKKAV
        KRAKKAV
Subjt:  KRAKKAV

A0A1S3B1Z2 histone H12.7e-8091.83Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVE-VPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
        M+STGE AEVKVPAEDV PVE VPA EE KE EK PVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
Subjt:  MSSTGE-AEVKVPAEDVPPVE-VPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR

Query:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA
        KILALQLKNSTAKGKLTKIKASYKLSE GKKKDKNATKVAKANAEK TKQARTTRTTGRKRKAVKK+E    A KKVVAKKPKRSTPAKPKQPKSIK+PA
Subjt:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA

Query:  AKRAKKAV
        AKRAKKAV
Subjt:  AKRAKKAV

A0A5A7SK97 Histone H12.7e-8091.83Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVE-VPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
        M+STGE AEVKVPAEDV PVE VPA EE KE EK PVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
Subjt:  MSSTGE-AEVKVPAEDVPPVE-VPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR

Query:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA
        KILALQLKNSTAKGKLTKIKASYKLSE GKKKDKNATKVAKANAEK TKQARTTRTTGRKRKAVKK+E    A KKVVAKKPKRSTPAKPKQPKSIK+PA
Subjt:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA

Query:  AKRAKKAV
        AKRAKKAV
Subjt:  AKRAKKAV

A0A6J1GFQ2 histone H12.7e-7284.95Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEAEVKVPAED P VEVP+AEE KEAEK PV+EKK R PREKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR
        LALQLKNSTAKGKL KIKASY+LSE G KKDK A+KVAKANAEKKTKQARTTR T  KRK   A K  +A KKVVAKKPKR+TPAKPKQPKSI++PAAKR
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR

Query:  AKKAVA
        AKKAVA
Subjt:  AKKAVA

A0A6J1IMR2 histone H16.6e-7183.5Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGE EVKVPAED P  EVP+AEE KEAEK PV+EKK R PREKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR
        LALQLKNSTAKGKL KIKASY+LSE G KKDK A+KVAKANAEK TKQARTTR T  KRK   A K  +A KKVVAKKPKR+TPAKPKQPKSI++PAAKR
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR

Query:  AKKAVA
        AKKAVA
Subjt:  AKKAVA

SwissProt top hitse value%identityAlignment
P08283 Histone H11.2e-1643.15Show/hide
Query:  EVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKN
        E +VP ++ P  EV   ++ K ++  P K  KPR P          ASHP Y +MI +AI SL EKNGSS YAIAK++EEK K  LPANF+K+L   LK 
Subjt:  EVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKN

Query:  STAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAK--KVVAKKPKRSTPAKPKQPKSIKAPAAKRAKKAV
        + A GKL K+K S+KLS   KK    A    KA    K K  +       K KAV K + A   K VA KPK++  AKPK   +   P A + K  V
Subjt:  STAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAK--KVVAKKPKRSTPAKPKQPKSIKAPAAKRAKKAV

P23444 Histone H12.4e-1741.59Show/hide
Query:  STGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILA
        +T   E   P  D  P     A     A+    K KK  AP+++        +H PY +M++EAI+SL E+ GSS YAIAK++E+KHKA LP NFRK+L 
Subjt:  STGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILA

Query:  LQLKNSTAKGKLTKIKASYKLSETGK--KKDKNATKVAKANAEKKTKQAR-TTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKA-------
        +QLK   A GKLTK+K SYKLS   K   K K A K  K  A+K    A+   +T  + + A K   AAK     KPK  TPAKPK   + KA       
Subjt:  LQLKNSTAKGKLTKIKASYKLSETGK--KKDKNATKVAKANAEKKTKQAR-TTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKA-------

Query:  ---PAAKRAKKAVA
           P AK+A +A A
Subjt:  ---PAAKRAKKAVA

P27806 Histone H16.9e-1744.12Show/hide
Query:  AEVKVPAEDV---PPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL
        A++ VP  +V     V+ PAA   K A+ P   + K   P  KKPR +   +HP Y +M++EAI++L E++GSS  AI K++E+KHKA LPANFRKIL  
Subjt:  AEVKVPAEDV---PPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL

Query:  QLKNSTAKGKLTKIKASYKLSET-GKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEA---AKKVVAKKPKRSTPAKPKQPKSIKAPAAKRAK
        Q+K   A GKLTK+K SYKL++     K K ATK   A   K    A+ T      +KA  K +A   AK     KPK +  AKPK     KA AA  AK
Subjt:  QLKNSTAKGKLTKIKASYKLSET-GKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEA---AKKVVAKKPKRSTPAKPKQPKSIKAPAAKRAK

Query:  KAVA
        KA A
Subjt:  KAVA

P40267 Histone H15.1e-4458.25Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        M++ GE E        P V     E  K  E+ P  +KKPRAP+EKKP+ +K  +HPPYFQMI EA+ +LNEK GSSPYA+AKYME+KHK  LPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNAT---KVAKANAEKKTKQARTTRTTGRKRKAVKKDEAA---KKVVAKKPKRSTPAKPKQPKSIKAPA
        L LQLKNS AKGKL KIKASYKLSE GKK+    T   K+ KA+++KK +  R T T  +K +  KK +A    KKV AK+ ++STPAK KQPKSIK+PA
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKNAT---KVAKANAEKKTKQARTTRTTGRKRKAVKKDEAA---KKVVAKKPKRSTPAKPKQPKSIKAPA

Query:  AKRAKK
        AKRAKK
Subjt:  AKRAKK

Q08864 Histone H1-I6.5e-1540.38Show/hide
Query:  MSSTGEAEVKVP-AEDVPPVEVPAAEELK----EAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKH-KAVLP
        MS T  A V  P AE  P  E P A+  K    +  K P   K+P+AP+EKKP+ +   +HPPY +M+ +AI++L E+NGSS  A+ K++E K+ K +  
Subjt:  MSSTGEAEVKVP-AEDVPPVEVPAAEELK----EAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKH-KAVLP

Query:  ANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNAT-KVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAP
         NF K L+  +K     GKL K+K S+KLSE  K K K +T K AKA+ E K K+   +    +K +AVKK +A K+ V ++PK+    K ++ K+   P
Subjt:  ANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKDKNAT-KVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAP

Query:  AAKRAKKA
         A++ KKA
Subjt:  AAKRAKKA

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein7.3e-1440.1Show/hide
Query:  GEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQ
        G      P  D    + PAA+  K      VKEKK  A     P++  V+SHP Y +MI +AI +L E+ GSS YAI K++EEK K  LP  FRK+L L 
Subjt:  GEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQ

Query:  LKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPK----RSTPAKPKQPKSIKAPAAKRAKK
        LK   A GKL K+KAS+KL     K   ++ K A   +    K+  T   T  KRK V     AKK +A KPK    +   AK K     +A AA   +K
Subjt:  LKNSTAKGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPK----RSTPAKPKQPKSIKAPAAKRAKK

Query:  AV
        AV
Subjt:  AV

AT2G18050.1 histone H1-33.1e-2851.79Show/hide
Query:  RAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGK----KKDKNATK
        + P  KKPR+ K  +HPPYFQMI EA+  L EKNGSSPYAIAK +EEKHK++LP +FRK L+LQLKNS AKGKL KI+ASYKLS+T K    ++DK   K
Subjt:  RAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGK----KKDKNATK

Query:  VAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAA-KRAKKAVA
          K   ++ TK+ R++ T  +K  +V K E  +KV           K +QPKSIK+    K+A KA A
Subjt:  VAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAA-KRAKKAVA

AT2G18050.2 histone H1-31.1e-2051.02Show/hide
Query:  MINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGK----KKDKNATKVAKANAEKKTKQARTTRTTGR
        MI EA+  L EKNGSSPYAIAK +EEKHK++LP +FRK L+LQLKNS AKGKL KI+ASYKLS+T K    ++DK   K  K   ++ TK+ R++ T  +
Subjt:  MINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGK----KKDKNATKVAKANAEKKTKQARTTRTTGR

Query:  KRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAA-KRAKKAVA
        K  +V K E  +KV           K +QPKSIK+    K+A KA A
Subjt:  KRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAA-KRAKKAVA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein2.4e-0938.1Show/hide
Query:  TGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL
        +G A+  V + +  P       +     K   K  K  AP +KK      +SHP Y +MI +AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L +
Subjt:  TGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL

Query:  QLKNSTAKGKLTKIKASYKL----SETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAK-----KPK-RSTPAKPKQPKSIKAP
         LK   A  KL K+KAS+K+    S    K      K A   A+ K K A        K  A    + A KVVAK     KPK + T AKPK     K+ 
Subjt:  QLKNSTAKGKLTKIKASYKL----SETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAK-----KPK-RSTPAKPKQPKSIKAP

Query:  AAKRAKKAVA
        AA    KAVA
Subjt:  AAKRAKKAVA

AT2G30620.2 winged-helix DNA-binding transcription factor family protein1.7e-1038.86Show/hide
Query:  TGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL
        +G A+  V + +  P       +     K   K  K  AP +KK      +SHP Y +MI +AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L +
Subjt:  TGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL

Query:  QLKNSTAKGKLTKIKASYKL-SETGKKKDKNATKV-AKANAEKKTKQART-TRTTGRKRKA--VKKDEAAKKVVAKKPKRSTPAKPKQPKSIK
         LK   A  KL K+KAS+K+ S       K A  V  KA    K K +RT TRT+  K+ A   KK    KK  AK  K  +PAK    +  K
Subjt:  QLKNSTAKGKLTKIKASYKL-SETGKKKDKNATKV-AKANAEKKTKQART-TRTTGRKRKA--VKKDEAAKKVVAKKPKRSTPAKPKQPKSIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCAACCGGAGAGGCTGAAGTTAAAGTTCCGGCGGAGGATGTTCCTCCTGTGGAGGTTCCGGCTGCAGAGGAGCTGAAGGAGGCTGAGAAGCCGCCGGTGAAGGA
GAAGAAACCTAGGGCTCCGAGGGAGAAGAAGCCTAGGCAGTCTAAAGTTGCTTCACATCCACCGTACTTTCAGATGATTAATGAAGCAATCTCGTCGCTCAACGAGAAGA
ATGGATCGAGTCCGTACGCTATAGCCAAATACATGGAGGAGAAACACAAGGCGGTTCTTCCTGCGAATTTCAGGAAAATCTTGGCTCTTCAATTGAAGAATTCCACCGCT
AAAGGAAAATTAACGAAGATCAAGGCATCGTATAAGCTGTCCGAAACGGGAAAGAAAAAGGACAAGAACGCAACGAAGGTCGCAAAAGCGAACGCAGAGAAGAAAACTAA
ACAAGCAAGAACGACGAGAACTACCGGAAGGAAGAGGAAGGCGGTGAAGAAGGACGAGGCGGCGAAGAAGGTTGTTGCAAAGAAACCGAAAAGATCAACTCCGGCGAAGC
CAAAACAGCCGAAATCAATTAAGGCCCCTGCTGCGAAGAGGGCTAAGAAAGCGGTTGCGGGAATGTAG
mRNA sequenceShow/hide mRNA sequence
ACAAAGTCTCTTCATTTTCTTTGTATCAAAATGCAAGGAAAAACAAACCCTCGTTTGTATTTATCCAAATATCGTCTCCCTTCAGGATTTGGGCCTCATAATAACGATCC
GTTCTTTTCCACGTGTGCGCTCCAGATCTTTCTTTAGTACAACTTGGCTATCCGTGTCCACTCGGACTGGCCAATCACAGCTCGTTTTTCCCTCCACATCCAGATTCTTC
TTCCCCTATAACTGCCTCGGAGCAGTCCTCCGTCTCGAGCATATTCGCTAAGCGTTTGCTTCTCGTTCTGTAGTTTGTGAAAATTTTGATCATGTCGTCAACCGGAGAGG
CTGAAGTTAAAGTTCCGGCGGAGGATGTTCCTCCTGTGGAGGTTCCGGCTGCAGAGGAGCTGAAGGAGGCTGAGAAGCCGCCGGTGAAGGAGAAGAAACCTAGGGCTCCG
AGGGAGAAGAAGCCTAGGCAGTCTAAAGTTGCTTCACATCCACCGTACTTTCAGATGATTAATGAAGCAATCTCGTCGCTCAACGAGAAGAATGGATCGAGTCCGTACGC
TATAGCCAAATACATGGAGGAGAAACACAAGGCGGTTCTTCCTGCGAATTTCAGGAAAATCTTGGCTCTTCAATTGAAGAATTCCACCGCTAAAGGAAAATTAACGAAGA
TCAAGGCATCGTATAAGCTGTCCGAAACGGGAAAGAAAAAGGACAAGAACGCAACGAAGGTCGCAAAAGCGAACGCAGAGAAGAAAACTAAACAAGCAAGAACGACGAGA
ACTACCGGAAGGAAGAGGAAGGCGGTGAAGAAGGACGAGGCGGCGAAGAAGGTTGTTGCAAAGAAACCGAAAAGATCAACTCCGGCGAAGCCAAAACAGCCGAAATCAAT
TAAGGCCCCTGCTGCGAAGAGGGCTAAGAAAGCGGTTGCGGGAATGTAGAGTAGAGTTTGAAGAAGTTGTCTTTGAATTTTCTTCTGTGAATATGTTGCTTACGAGTTAC
GATCATGTAGTGTGTAAATTCTGGGATCTTGCGATCTTTTAGTTTTTGCTTTAACTGCAATGGGAATAAATCCTTTCTTGTTCAGAATTTCAATTCTATTCAAATTCATC
CTTTGAATTGGAGACACATGGCTTTGGTTTTCCGTTGAATTAGAACGGAGAATCAATAGAAACCTATAGATTTACATCAATTATTCAATTAGGATTCAGCTCATCTATGG
CCTACGGTTCCCATTCTCTGAGTCCTAATTTGGGAATATTGGACATTTTAATTCAGACTTGGAAGGAGAAGAAAACAAACGAGTTTGTCAGTGAGTGGTTGTATCACGAT
ATCTATGTCATCATCCTATACCTTATTTTCAAGACAGAAGAAAAGTGATCTTGAAACTTTTATTTTAATTTTTTGCCAATTAATCCATTTTAGGAAACTTAGAAATCCTT
GTAAATTCTTCCCTTTTAAGAAAATCGATTTTCGAATCGCA
Protein sequenceShow/hide protein sequence
MSSTGEAEVKVPAEDVPPVEVPAAEELKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTA
KGKLTKIKASYKLSETGKKKDKNATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKRAKKAVAGM