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CaUC01G020030 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G020030
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUPF0434 protein
Genome locationCiama_Chr01:33063064..33065242
RNA-Seq ExpressionCaUC01G020030
SyntenyCaUC01G020030
Gene Ontology termsNA
InterPro domainsIPR005651 - Trm112-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008440859.1 PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo]2.5e-3591.86Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK
        MVRISKALLKEASSG +NTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPK+GRII+ +DAL GEDTVEITREK
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK

XP_011658060.1 uncharacterized protein LOC101219142 [Cucumis sativus]3.9e-3387.21Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK
        MVRI+KALLKEA+SG +NTLSQILVCPLSKQPLRYC ASNSLISDTIGVSFPIRDGIPCLVPK+GRII+ +DAL  EDTVEITREK
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK

XP_022949957.1 uncharacterized protein LOC111453193 [Cucurbita moschata]4.8e-3182.56Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK
        MVRIS++LLKEA SGL+ TLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPK+GRII+T+D L GEDTVEI REK
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK

XP_022977422.1 uncharacterized protein LOC111477769 isoform X2 [Cucurbita maxima]2.4e-3081.4Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK
        MVRIS++LLKEA SGL+ TLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPK+G II+T+D L GEDTVEI REK
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK

XP_038883681.1 UPF0434 protein Ecaj_0131 [Benincasa hispida]4.7e-3489.53Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK
        MV+ISKALLKEASSG + TLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIRDGIPCLVPKDGRII+TEDAL GEDTVE+TREK
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK

TrEMBL top hitse value%identityAlignment
A0A0A0KHC1 Uncharacterized protein1.9e-3387.21Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK
        MVRI+KALLKEA+SG +NTLSQILVCPLSKQPLRYC ASNSLISDTIGVSFPIRDGIPCLVPK+GRII+ +DAL  EDTVEITREK
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK

A0A1S3B2Q6 UPF0434 protein ECH_01941.2e-3591.86Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK
        MVRISKALLKEASSG +NTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPK+GRII+ +DAL GEDTVEITREK
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK

A0A5A7SJZ8 UPF0434 protein1.2e-3591.86Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK
        MVRISKALLKEASSG +NTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPK+GRII+ +DAL GEDTVEITREK
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK

A0A6J1GDI4 uncharacterized protein LOC1114531932.3e-3182.56Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK
        MVRIS++LLKEA SGL+ TLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPK+GRII+T+D L GEDTVEI REK
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK

A0A6J1IIE0 uncharacterized protein LOC111477769 isoform X21.2e-3081.4Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK
        MVRIS++LLKEA SGL+ TLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPK+G II+T+D L GEDTVEI REK
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEITREK

SwissProt top hitse value%identityAlignment
Q2T9V7 Protein preY, mitochondrial6.0e-0850Show/hide
Query:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRI
        L + LVCPLSK+PLRY  ++N LI++ +G+++PI DGIP ++P+  R+
Subjt:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRI

Q5M8Z2 Protein preY, mitochondrial3.0e-1241.76Show/hide
Query:  TLVDLHSKMVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEIT
        TL  LH  +V  S     + S     TL Q LVCPLS++ LRY E++N LI+D +G+++PI DGIP ++P+D R+I  +      DT + T
Subjt:  TLVDLHSKMVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDALNGEDTVEIT

Q5U1Z8 Protein preY, mitochondrial1.2e-0853.19Show/hide
Query:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGR
        L Q LVCPLSK+PLRY  ++N LI+D +G+++PI DG+P ++P+  R
Subjt:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGR

Q96I23 Protein preY, mitochondrial6.0e-0850Show/hide
Query:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRI
        L + LVCPLSK+PLRY  ++N LI++ +G+++PI DGIP ++P+  R+
Subjt:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRI

Q9D1C3 Protein preY, mitochondrial4.6e-0851.06Show/hide
Query:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGR
        L Q LVCPLSK+PLRY  ++N L+++ +G+++PI DGIP ++P+  R
Subjt:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGR

Arabidopsis top hitse value%identityAlignment
AT4G35905.1 unknown protein1.6e-2469.01Show/hide
Query:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTE
        MVR+++ LLK+A + +  TLS+ILVCPLSKQPLR+CE + SL+SDTIGVSFPI+DGIPCLVPKDG+I++ E
Subjt:  MVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGGAGTCTCCGGCCTTCGGCCCCTGCAGTGAATTTAAACCTTCCGAAGAAGAAATTGAGACCGCGAAAAACTGAATCCAACTCAACTCTCGTCGATCTTCATTCTAAAAT
GGTAAGAATAAGCAAAGCGCTTCTGAAAGAAGCGAGCTCTGGTCTCTCCAACACGCTCTCCCAAATCCTGGTCTGCCCGCTCTCCAAACAACCTCTAAGGTATTGTGAGG
CGTCGAATTCTCTAATCAGCGATACGATTGGTGTTTCTTTTCCCATAAGGGACGGAATTCCTTGCTTGGTGCCAAAGGATGGAAGGATAATCGACACTGAGGATGCATTG
AACGGTGAGGATACTGTTGAGATTACTCGAGAAAAATGA
mRNA sequenceShow/hide mRNA sequence
CGGAGTCTCCGGCCTTCGGCCCCTGCAGTGAATTTAAACCTTCCGAAGAAGAAATTGAGACCGCGAAAAACTGAATCCAACTCAACTCTCGTCGATCTTCATTCTAAAAT
GGTAAGAATAAGCAAAGCGCTTCTGAAAGAAGCGAGCTCTGGTCTCTCCAACACGCTCTCCCAAATCCTGGTCTGCCCGCTCTCCAAACAACCTCTAAGGTATTGTGAGG
CGTCGAATTCTCTAATCAGCGATACGATTGGTGTTTCTTTTCCCATAAGGGACGGAATTCCTTGCTTGGTGCCAAAGGATGGAAGGATAATCGACACTGAGGATGCATTG
AACGGTGAGGATACTGTTGAGATTACTCGAGAAAAATGAGCAGTGCTTGTTTGGGAGTGGAAGGCAGTTTTTATTTCTTGAGCTGAATAATGAGAAGAGATGTCAAGATA
AGGACACTACACTTCACACTTGTATGTTTATGCTTGTAAGTTCAATTTAGAATGATTTGAATGGTCTCATTCCTCAAAATTGCTGGTGTTGGCCAATAAAATAGTCAGAT
TAGACCACTTGTCCACAATTCTTTCTTACTCTTTTTTCTAGCGATGAAATTGGTATGGGGAAACTAAACAGGAGAATATCTTCTAAATTTTTCTGTTCAAAACTTTTGGG
CTTGTGCTCAACTGTCTGAAGGTAATTTGAAAGGTTGCTGATTCACCTACAATTTCTTGCTGTTTTCCATAATATCAACTCCTTATCCTTCGGGTTTAATATGAATTGGA
GGCCTTTTTGCCTTAAATAAATTACACTGACC
Protein sequenceShow/hide protein sequence
RSLRPSAPAVNLNLPKKKLRPRKTESNSTLVDLHSKMVRISKALLKEASSGLSNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIDTEDAL
NGEDTVEITREK