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CaUC01G020050 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G020050
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionE3 ubiquitin-protein ligase RNF181 homolog
Genome locationCiama_Chr01:33066008..33066421
RNA-Seq ExpressionCaUC01G020050
SyntenyCaUC01G020050
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603894.1 hypothetical protein SDJN03_04503, partial [Cucurbita argyrosperma subsp. sororia]7.3e-5282.91Show/hide
Query:  GIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDEDVQTTEV
        GIKDAL CGD+  SCFM+RAKEEGCETSAHPTLD AAMEREWCSVCLS VME + A+ILPCQHEFHKICVERWFHEC  QKTCSICRFW+ DED Q TEV
Subjt:  GIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDEDVQTTEV

Query:  LTEEMVIWFTSFHVIGY
        LTEEMVIW TS HVI Y
Subjt:  LTEEMVIWFTSFHVIGY

XP_022132660.1 E3 ubiquitin-protein ligase RNF181 homolog [Momordica charantia]6.1e-5174.1Show/hide
Query:  MVCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARI--LPCQHEFHKICVERWFHECH
        MV RKIISS YNF+VL+L  GIKDAL CGD+  S   QRAK+EGCE  AHPTL   A+ REWCSVCLSKVMEGEE+R+  LPC HEFHKIC++RWFHEC 
Subjt:  MVCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARI--LPCQHEFHKICVERWFHECH

Query:  KQKTCSICRFWMRDEDVQTTEVLTEEMVIWFTSFHVIGY
         QKTC IC+FW+RD+D QTTEVLTEEMVIWFTSFHV+GY
Subjt:  KQKTCSICRFWMRDEDVQTTEVLTEEMVIWFTSFHVIGY

XP_022977421.1 uncharacterized protein LOC111477769 isoform X1 [Cucurbita maxima]3.9e-4578.9Show/hide
Query:  GDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDEDVQTTEVLTEEMVIW
        GD+  S FM+RAKEEGCETSAHPTLD AA+EREWCSVC S VME + A+ILPCQHEFHKICVERWFHEC  QKTC IC+FW+RDED Q TEVLTEEMVIW
Subjt:  GDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDEDVQTTEVLTEEMVIW

Query:  FTSFHVIGY
         TS HVI Y
Subjt:  FTSFHVIGY

XP_031276738.1 E3 ubiquitin-protein ligase At1g12760 [Pistacia vera]3.5e-2247.22Show/hide
Query:  MVCRKIISSCYNFIVLRLCLGI--KDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAM----EREWCSVCLSKVMEGEEARILPCQHEFHKICVERWF
        MV +K+ISS YN I+ R   G+    A    ++ AS   ++A E+G  +S+  +L GA++    E E C VCLS + EGE+ R+LPC HEFH+ C+ RWF
Subjt:  MVCRKIISSCYNFIVLRLCLGI--KDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAM----EREWCSVCLSKVMEGEEARILPCQHEFHKICVERWF

Query:  HECHKQKTCSICRFWMR-DEDVQTTEVLTEEMVIWFTSFHVIGY
        + C   KTC ICRF M+ DE+    E  TEEMVIWF+SFHV G+
Subjt:  HECHKQKTCSICRFWMR-DEDVQTTEVLTEEMVIWFTSFHVIGY

XP_038883680.1 E3 ubiquitin-protein ligase znrf3-like [Benincasa hispida]1.9e-6083.58Show/hide
Query:  VCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQK
        + +KIISSC+NFI LR C GIK+ALLC D  ASCFMQRAKE+GCETS HPTLDGAAME EWCSVCLSKVME EEAR+LPCQHE HKICVERWFH+C KQK
Subjt:  VCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQK

Query:  TCSICRFWMRDEDVQTTEVLTEEMVIWFTSFHVI
        TC ICRFWMRDEDVQTTEVLTEEMVIWFT F VI
Subjt:  TCSICRFWMRDEDVQTTEVLTEEMVIWFTSFHVI

TrEMBL top hitse value%identityAlignment
A0A2C9WNJ5 RING-type domain-containing protein5.5e-2147.52Show/hide
Query:  MVCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMER--EWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECH
        M  +K+ S   NFI LR  L IKD ++  +  A    + AK EG   SA  +    AME   E C VCLS++  G + R+LPC H+FHK+C+ERWF+ C 
Subjt:  MVCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMER--EWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECH

Query:  KQKTCSICRFWMRDED--VQTTEVLTEEMVIWFTSFHVIGY
         +KTC ICRF M +E+   +  E LTEEMVIWF+SFHV G+
Subjt:  KQKTCSICRFWMRDED--VQTTEVLTEEMVIWFTSFHVIGY

A0A5B6YSP6 Putative E3 ubiquitin-protein ligase RHA2A (Fragment)2.5e-2146.04Show/hide
Query:  MVCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVME-GEEARILPCQHEFHKICVERWFHECHK
        MV +K++S   +FI LR    IKD+    ++  S    + K EG +      +   A+E E C VCLS++ E GE+ R+LPC HEFH++CV+RWF+ C  
Subjt:  MVCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVME-GEEARILPCQHEFHKICVERWFHECHK

Query:  QKTCSICRFWMRDED-VQTTEVLTEEMVIWFTSFHVIGY
         KTC +CRF M DE+  Q  E LTEEMVIWF+SFH  G+
Subjt:  QKTCSICRFWMRDED-VQTTEVLTEEMVIWFTSFHVIGY

A0A5C7HSR0 RING-type domain-containing protein6.5e-2246.81Show/hide
Query:  MVCRKIISSCYNFIVL-RLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHP--TLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHEC
        MV ++++ S YNFI L    LG K ALL  D+ AS        EG   S  P  +   A  E E C VCLS++ +GE+ R+LPC H+FHK+CV+ WF+ C
Subjt:  MVCRKIISSCYNFIVL-RLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHP--TLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHEC

Query:  HKQKTCSICRFWM-RDEDVQTTEVLTEEMVIWFTSFHVIGY
           KTC +CRF M  +E     E LTEEM+IWF+SFHV G+
Subjt:  HKQKTCSICRFWM-RDEDVQTTEVLTEEMVIWFTSFHVIGY

A0A6J1BT35 E3 ubiquitin-protein ligase RNF181 homolog3.0e-5174.1Show/hide
Query:  MVCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARI--LPCQHEFHKICVERWFHECH
        MV RKIISS YNF+VL+L  GIKDAL CGD+  S   QRAK+EGCE  AHPTL   A+ REWCSVCLSKVMEGEE+R+  LPC HEFHKIC++RWFHEC 
Subjt:  MVCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARI--LPCQHEFHKICVERWFHECH

Query:  KQKTCSICRFWMRDEDVQTTEVLTEEMVIWFTSFHVIGY
         QKTC IC+FW+RD+D QTTEVLTEEMVIWFTSFHV+GY
Subjt:  KQKTCSICRFWMRDEDVQTTEVLTEEMVIWFTSFHVIGY

A0A6J1IJV3 uncharacterized protein LOC111477769 isoform X11.9e-4578.9Show/hide
Query:  GDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDEDVQTTEVLTEEMVIW
        GD+  S FM+RAKEEGCETSAHPTLD AA+EREWCSVC S VME + A+ILPCQHEFHKICVERWFHEC  QKTC IC+FW+RDED Q TEVLTEEMVIW
Subjt:  GDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDEDVQTTEVLTEEMVIW

Query:  FTSFHVIGY
         TS HVI Y
Subjt:  FTSFHVIGY

SwissProt top hitse value%identityAlignment
Q0V9R0 E3 ubiquitin-protein ligase arkadia2.5e-0740Show/hide
Query:  FMQR---AKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICR
        F QR   +K++G E +   T        E C++CLS + EGE+ R LPC H FH++CV++W       K C ICR
Subjt:  FMQR---AKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICR

Q68DV7 E3 ubiquitin-protein ligase RNF438.7e-0833.33Show/hide
Query:  ASCFMQRAK--EEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDED
        ASC   R +  + G   S+ P           C++CL +  EG+E R++ C HEFH+ CV+ W H+    +TC +C F + + D
Subjt:  ASCFMQRAK--EEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDED

Q6NRV8 E3 ubiquitin-protein ligase arkadia-B2.5e-0740Show/hide
Query:  FMQR---AKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICR
        F QR   +K++G E +   T        E C++CLS + EGE+ R LPC H FH++CV++W       K C ICR
Subjt:  FMQR---AKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICR

Q9M2S6 E3 ubiquitin-protein ligase SDIR16.7e-0834.48Show/hide
Query:  AKEEGCETSAHPTLDGAAMERE------WCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRF-----WMRDEDV
        AK+    +SA   LD A   ++       CSVCL +V  GE  R LPC H+FH  C++ W  +   Q TC +C+F     W   +++
Subjt:  AKEEGCETSAHPTLDGAAMERE------WCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRF-----WMRDEDV

Q9ZT50 E3 ubiquitin-protein ligase RHA2A8.7e-0850Show/hide
Query:  CSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDED
        C VCLSK+ EGEE R L C+H FHK C+E W H+ +   TC +CR  +  +D
Subjt:  CSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDED

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A6.2e-0950Show/hide
Query:  CSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDED
        C VCLSK+ EGEE R L C+H FHK C+E W H+ +   TC +CR  +  +D
Subjt:  CSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDED

AT3G51325.1 RING/U-box superfamily protein1.9e-1343.04Show/hide
Query:  GAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDEDVQTTEVLTEEMVIWFTSFH
        G   E E CSVCL ++   +  + LPC HEFH +CV+ WF+   K   C +CRF        TT +LT+E+++WF+SFH
Subjt:  GAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWMRDEDVQTTEVLTEEMVIWFTSFH

AT3G55530.1 RING/U-box superfamily protein4.7e-0934.48Show/hide
Query:  AKEEGCETSAHPTLDGAAMERE------WCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRF-----WMRDEDV
        AK+    +SA   LD A   ++       CSVCL +V  GE  R LPC H+FH  C++ W  +   Q TC +C+F     W   +++
Subjt:  AKEEGCETSAHPTLDGAAMERE------WCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRF-----WMRDEDV

AT5G45290.1 RING/U-box superfamily protein4.0e-0846.67Show/hide
Query:  CSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICR
        C +CL +  E +  R LPC HEFHK CV++W  E H  + C +CR
Subjt:  CSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICR

AT5G45290.2 RING/U-box superfamily protein3.1e-0846.67Show/hide
Query:  CSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICR
        C +CL +  E +  R LPC HEFHK CV++W  E H  + C +CR
Subjt:  CSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGCAGGAAGATAATCTCCTCTTGTTATAACTTCATTGTACTCAGATTGTGTCTAGGTATCAAAGATGCATTATTATGTGGGGATATTTTTGCTTCATGTTTTAT
GCAGAGGGCCAAGGAGGAAGGTTGTGAGACTTCGGCACATCCAACCTTGGATGGTGCGGCTATGGAGAGGGAGTGGTGTTCAGTGTGTTTGTCAAAAGTAATGGAGGGAG
AGGAAGCGCGAATTCTTCCTTGCCAACACGAGTTTCACAAGATATGTGTCGAGAGGTGGTTTCATGAATGCCATAAACAAAAAACTTGTTCAATTTGTCGGTTTTGGATG
AGAGATGAAGATGTTCAGACAACGGAAGTGCTTACAGAGGAGATGGTAATTTGGTTCACTTCTTTTCATGTTATTGGTTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGCAGGAAGATAATCTCCTCTTGTTATAACTTCATTGTACTCAGATTGTGTCTAGGTATCAAAGATGCATTATTATGTGGGGATATTTTTGCTTCATGTTTTAT
GCAGAGGGCCAAGGAGGAAGGTTGTGAGACTTCGGCACATCCAACCTTGGATGGTGCGGCTATGGAGAGGGAGTGGTGTTCAGTGTGTTTGTCAAAAGTAATGGAGGGAG
AGGAAGCGCGAATTCTTCCTTGCCAACACGAGTTTCACAAGATATGTGTCGAGAGGTGGTTTCATGAATGCCATAAACAAAAAACTTGTTCAATTTGTCGGTTTTGGATG
AGAGATGAAGATGTTCAGACAACGGAAGTGCTTACAGAGGAGATGGTAATTTGGTTCACTTCTTTTCATGTTATTGGTTACTAA
Protein sequenceShow/hide protein sequence
MVCRKIISSCYNFIVLRLCLGIKDALLCGDIFASCFMQRAKEEGCETSAHPTLDGAAMEREWCSVCLSKVMEGEEARILPCQHEFHKICVERWFHECHKQKTCSICRFWM
RDEDVQTTEVLTEEMVIWFTSFHVIGY