CuGenDBv2

Gene ID	CaUC01G020060
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	la-related protein 1C
Genome location	Ciama_Chr01:33069262..33076274
RNA-Seq Expression	CaUC01G020060
Synteny	CaUC01G020060
Gene Ontology terms	NA
InterPro domains	IPR006630 - La-type HTH domain IPR036388 - Winged helix-like DNA-binding domain superfamily IPR036390 - Winged helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6603893.1 La-related protein 1C, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-230

73.32

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Query:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSS--SEEPVGESYDGGNGSS
        S   DADSVTAS+ADHS RNSGQ+N    SSPKSSSRRSGGRTVSSPW QIVRGE+D A AVSSS S T VVEPV+F+SSSS  SEEPVGE YDGGNGSS
Subjt:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSS--SEEPVGESYDGGNGSS

Query:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR
        ANAGKKP WNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDS+KSLGDGSAG Q            TGTSSS SSNKEGNNDVSPNPDSTLTHPITSR
Subjt:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR

Query:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
        QKSMRRNGS++S+NS+L QQSAPSSPVIDPAPN+SS+DQTQRTAFI SQS +DHGHQQPR+SFRSRGGGSHPRGDNSHHHNY SRRDHDRGNQDWNSNRN
Subjt:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN

Query:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIG------PPPPEALRGVPFVAPISPNAMFFHGPDPQ
        +NAQP RVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFP             DF PPVVYIG      PPPPEALRGVPFVAPI PNAMFFHGPDPQ
Subjt:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIG------PPPPEALRGVPFVAPISPNAMFFHGPDPQ

Query:  LYPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQP
        LY MIVSQIEYYFS ENL+KDTFLRQ M+E+GWVPVRLIA+FSK                      V+RLTENIQTILDALQSST+VEVK          
Subjt:  LYPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQP

Query:  FPPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEG
                                          GD VRRRNDYDRWIIRPGQ+P I+ +PLSP SSNQDML AGVQ IALEN NHR SEGGQGDVHV  
Subjt:  FPPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEG

Query:  EALHNSRPSGNLSMQAQPYGD------NTKAGSDYSSSERS
        EALH+SRPSGNLSMQAQP GD      NTKAG D SSSERS
Subjt:  EALHNSRPSGNLSMQAQPYGD------NTKAGSDYSSSERS

XP_004134846.1 la-related protein 1C [Cucumis sativus]

6.3e-239

76.51

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Query:  SNYADADSVTASTADHSPRNSGQ-NNGSSGSSPKSSSRRSGGRTV-SSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSS
        SN  DADSVTAS ADHSPRNSGQ NN SSGSSPKSSSRRSGGRTV SSPWT+IVRGEID+AA VSSSASPTAVVEPVSF SSSSSEEPVGESYDGGNGS+
Subjt:  SNYADADSVTASTADHSPRNSGQ-NNGSSGSSPKSSSRRSGGRTV-SSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSS

Query:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR
        ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQ            TGTSSSASSNKEGNNDVSPNPDSTLTHPITSR
Subjt:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR

Query:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
        QKSMRRNGSSNS+NSSLPQQSAPSSPVID APNNS KDQTQRT F+ SQSHSDHGHQQPRNS+RSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
Subjt:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN

Query:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIV
        YNAQP RVVHRFIRP PPPPPNTTG+ISSPTMR IGGPLPFP             DFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLY MIV
Subjt:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIV

Query:  SQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVI
        SQIEYYFS ENLIKDTFLRQNMNEEGWVPV+LIASFSK                      VQRLTENIQTILDALQSSTVVEVK                
Subjt:  SQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVI

Query:  GDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISG--SPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALH
                                    GDTVRRR+DYDRWIIRPGQ+P ISG  SPLSPGSS QDMLAAGV+ IALEN NHR SEGGQGDVHV+ EA H
Subjt:  GDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISG--SPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALH

Query:  NSRPSGNLSMQAQPYGDNTKAGSDYSSSER
                        +NTKAGS++SSSER
Subjt:  NSRPSGNLSMQAQPYGDNTKAGSDYSSSER

XP_008440860.1 PREDICTED: la-related protein 1C [Cucumis melo]

7.2e-235

75.44

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Query:  SNYADADSVTASTADHSPRNSGQ-NNGSSGSSPKSSSRRSGGRTV-SSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSS
        SN  DADSVTAS ADHSPRNSGQ NN SSGSSPKSSSRRSGGRTV SSPWT+IVRGEID+AA VSSSASPTAVVEPVSF   SSSEEPVGESYDGGNGS+
Subjt:  SNYADADSVTASTADHSPRNSGQ-NNGSSGSSPKSSSRRSGGRTV-SSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSS

Query:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR
        ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAK TPKSSSDSLKSLGDGS GAQ            TGTSSSA SNKEGNNDVSPNPDSTL HPITSR
Subjt:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR

Query:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
        QKSMRRNGSSNS+NS+LPQQSAPSSPVID APNNSSKDQTQRT F+ SQSH+DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
Subjt:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN

Query:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIV
        YNAQP RVVHRFIRP PPPPPNTTG+ISSPTMR IGGPLPFP             DFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLY MIV
Subjt:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIV

Query:  SQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVI
        SQIEYYFS ENLIKDTFLRQNMNEEGWVPV+LIASFSK                      VQRLTENIQTILDALQSSTVVEVK                
Subjt:  SQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVI

Query:  GDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISG--SPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALH
                                    GDTVRRR+DYDRWIIRPGQ+P ISG  SPLSPGSSNQDMLA GVQ IALEN NH+ SEGGQG+VHV+ EA H
Subjt:  GDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISG--SPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALH

Query:  NSRPSGNLSMQAQPYGDNTKAGSDYSSSERS
                         NTKAGS++SSSERS
Subjt:  NSRPSGNLSMQAQPYGDNTKAGSDYSSSERS

XP_022949955.1 la-related protein 1C-like isoform X1 [Cucurbita moschata]

3.7e-231

73.44

Show/hide

Query:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSS--SEEPVGESYDGGNGSS
        S   DADSVTAS+ADHS RNSGQ+N    SSPKSSSRRSGGRTVSSPW QIVRGE+D A AVSSS S T VVEPV+F+SSSS  SEEPVGE YDGGNGSS
Subjt:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSS--SEEPVGESYDGGNGSS

Query:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR
        ANAGKKP WNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDS+KSLGDGSAG Q            TGTSSS SSNKEGNNDVSPNPDSTLTHPITSR
Subjt:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR

Query:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
        QKS+RRNGS++S+NS+L QQSAPSSPVIDPAPN+SS+DQTQRTAFI SQSH+DHGHQQPR+SFRSRGGGSHPRGDNSHHHNY SRRDHDRGNQDWNSNRN
Subjt:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN

Query:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIG-----PPPPEALRGVPFVAPISPNAMFFHGPDPQL
        +NAQP RVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFP             DF PPVVYIG     PPPPEALRGVPFVAPI PNAMFFHGPDPQL
Subjt:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIG-----PPPPEALRGVPFVAPISPNAMFFHGPDPQL

Query:  YPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPF
        Y MIVSQIEYYFS ENL+KDTFLRQ M+E+GWVPVRLIA+FSK                      V+RLTENIQTILDALQSST+VEVK           
Subjt:  YPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPF

Query:  PPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGE
                                         GD VRRRNDYDRWIIRPGQ+P I+ +PLSP SSNQDMLAAGVQ IALEN NHR SEGGQGDVHV  E
Subjt:  PPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGE

Query:  ALHNSRPSGNLSMQAQPYGD------NTKAGSDYSSSERS
        ALH+ RPSGNLSMQAQP GD      NTKAG D SSSERS
Subjt:  ALHNSRPSGNLSMQAQPYGD------NTKAGSDYSSSERS

XP_038881160.1 la-related protein 1C-like [Benincasa hispida]

1.3e-236

76.24

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Query:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSSAN
        SN  DADSVTASTADHSPRNSGQNN SSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSF SSSSSEEPVGESYDGGNGSSAN
Subjt:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSSAN

Query:  AGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSRQK
        AGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGS GAQ            TG SSSASSNKEGNNDVSPNPDSTLTHPIT RQK
Subjt:  AGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSRQK

Query:  SMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYN
        SMRRNGSSNS+NSSLPQQSAPSSPVID APNNS KDQTQRT  + SQSH+DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRD+DRGNQDWNSNRNYN
Subjt:  SMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYN

Query:  AQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIVSQ
        AQP RVVHRFIRPPPPPPPNTT FISSPTMRPIGGPLPFP             DF PPVVYIG PPPEALRGVPFVAPISPNAMFFH PDPQLY MIVSQ
Subjt:  AQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIVSQ

Query:  IEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVIGD
        IEYYFSSENLIKDTFLRQNMNEEGWVPV+LIASFSK                      VQRLTENIQTILDALQSSTVVEVK                  
Subjt:  IEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVIGD

Query:  FKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALHNSRP
                                  GDTVRRRNDY+RWIIRPGQ+P +SG PLSPGSSNQDMLAAGVQ IALEN NHRG EGGQGD             
Subjt:  FKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALHNSRP

Query:  SGNLSMQAQPYGDNTKAGSDYSSSERS
        +G +         NT AGSD+SSSERS
Subjt:  SGNLSMQAQPYGDNTKAGSDYSSSERS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B2V3 la-related protein 1C

3.5e-235

75.44

Show/hide

Query:  SNYADADSVTASTADHSPRNSGQ-NNGSSGSSPKSSSRRSGGRTV-SSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSS
        SN  DADSVTAS ADHSPRNSGQ NN SSGSSPKSSSRRSGGRTV SSPWT+IVRGEID+AA VSSSASPTAVVEPVSF   SSSEEPVGESYDGGNGS+
Subjt:  SNYADADSVTASTADHSPRNSGQ-NNGSSGSSPKSSSRRSGGRTV-SSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSS

Query:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR
        ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAK TPKSSSDSLKSLGDGS GAQ            TGTSSSA SNKEGNNDVSPNPDSTL HPITSR
Subjt:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR

Query:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
        QKSMRRNGSSNS+NS+LPQQSAPSSPVID APNNSSKDQTQRT F+ SQSH+DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
Subjt:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN

Query:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIV
        YNAQP RVVHRFIRP PPPPPNTTG+ISSPTMR IGGPLPFP             DFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLY MIV
Subjt:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIV

Query:  SQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVI
        SQIEYYFS ENLIKDTFLRQNMNEEGWVPV+LIASFSK                      VQRLTENIQTILDALQSSTVVEVK                
Subjt:  SQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVI

Query:  GDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISG--SPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALH
                                    GDTVRRR+DYDRWIIRPGQ+P ISG  SPLSPGSSNQDMLA GVQ IALEN NH+ SEGGQG+VHV+ EA H
Subjt:  GDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISG--SPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALH

Query:  NSRPSGNLSMQAQPYGDNTKAGSDYSSSERS
                         NTKAGS++SSSERS
Subjt:  NSRPSGNLSMQAQPYGDNTKAGSDYSSSERS

A0A5A7SHL1 La-related protein 1C

3.5e-235

75.44

Show/hide

Query:  SNYADADSVTASTADHSPRNSGQ-NNGSSGSSPKSSSRRSGGRTV-SSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSS
        SN  DADSVTAS ADHSPRNSGQ NN SSGSSPKSSSRRSGGRTV SSPWT+IVRGEID+AA VSSSASPTAVVEPVSF   SSSEEPVGESYDGGNGS+
Subjt:  SNYADADSVTASTADHSPRNSGQ-NNGSSGSSPKSSSRRSGGRTV-SSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSS

Query:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR
        ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAK TPKSSSDSLKSLGDGS GAQ            TGTSSSA SNKEGNNDVSPNPDSTL HPITSR
Subjt:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR

Query:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
        QKSMRRNGSSNS+NS+LPQQSAPSSPVID APNNSSKDQTQRT F+ SQSH+DHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
Subjt:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN

Query:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIV
        YNAQP RVVHRFIRP PPPPPNTTG+ISSPTMR IGGPLPFP             DFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLY MIV
Subjt:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIV

Query:  SQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVI
        SQIEYYFS ENLIKDTFLRQNMNEEGWVPV+LIASFSK                      VQRLTENIQTILDALQSSTVVEVK                
Subjt:  SQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVI

Query:  GDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISG--SPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALH
                                    GDTVRRR+DYDRWIIRPGQ+P ISG  SPLSPGSSNQDMLA GVQ IALEN NH+ SEGGQG+VHV+ EA H
Subjt:  GDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISG--SPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALH

Query:  NSRPSGNLSMQAQPYGDNTKAGSDYSSSERS
                         NTKAGS++SSSERS
Subjt:  NSRPSGNLSMQAQPYGDNTKAGSDYSSSERS

A0A6J1GDH3 la-related protein 1C-like isoform X2

3.1e-223

71.92

Show/hide

Query:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSS--SEEPVGESYDGGNGSS
        S   DADSVTAS+ADHS RNSGQ+N    SSPKSSSRRSGGRTVSSPW QIVRGE+D A AVSSS S T VVEPV+F+SSSS  SEEPVGE YDGGNGSS
Subjt:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSS--SEEPVGESYDGGNGSS

Query:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR
        ANAGKKP WNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDS+KSLGDGSAG Q            TGTSSS SSNKEGNNDVSPNPDSTLTHPITSR
Subjt:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR

Query:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
        QKS+RRNGS++S+NS+L QQSAPSSPVIDPAPN+SS+DQTQRTAFI SQSH+DHGHQQPR+SFRSRGGGSHPRGDNSHHHNY SRRDHDRGNQDWNSNRN
Subjt:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN

Query:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIG-----PPPPEALRGVPFVAPISPNAMFFHGPDPQL
        +NAQP RVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFP             DF PPVVYIG     PPPPEALRGVPFVAPI PNAMFFHGPDPQL
Subjt:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIG-----PPPPEALRGVPFVAPISPNAMFFHGPDPQL

Query:  YPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPF
        Y MIVSQIEYYFS ENL+KDTFLRQ M+E+GWVPVRLIA+FSK                      V+RLTENIQTILDALQSST+VEVK           
Subjt:  YPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPF

Query:  PPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGE
                                         GD VRRRNDYDRWIIRPGQ+P I+ +PLSP SSNQDMLAAGVQ IALEN NHR SEGGQGDVHVE +
Subjt:  PPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGE

Query:  ALHNSRPSGNLSMQAQPYGDNTKAGSDYSSSERS
           + RP G +         NTKAG D SSSERS
Subjt:  ALHNSRPSGNLSMQAQPYGDNTKAGSDYSSSERS

A0A6J1GE82 la-related protein 1C-like isoform X1

1.8e-231

73.44

Show/hide

Query:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSS--SEEPVGESYDGGNGSS
        S   DADSVTAS+ADHS RNSGQ+N    SSPKSSSRRSGGRTVSSPW QIVRGE+D A AVSSS S T VVEPV+F+SSSS  SEEPVGE YDGGNGSS
Subjt:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSS--SEEPVGESYDGGNGSS

Query:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR
        ANAGKKP WNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDS+KSLGDGSAG Q            TGTSSS SSNKEGNNDVSPNPDSTLTHPITSR
Subjt:  ANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSR

Query:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN
        QKS+RRNGS++S+NS+L QQSAPSSPVIDPAPN+SS+DQTQRTAFI SQSH+DHGHQQPR+SFRSRGGGSHPRGDNSHHHNY SRRDHDRGNQDWNSNRN
Subjt:  QKSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRN

Query:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIG-----PPPPEALRGVPFVAPISPNAMFFHGPDPQL
        +NAQP RVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFP             DF PPVVYIG     PPPPEALRGVPFVAPI PNAMFFHGPDPQL
Subjt:  YNAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIG-----PPPPEALRGVPFVAPISPNAMFFHGPDPQL

Query:  YPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPF
        Y MIVSQIEYYFS ENL+KDTFLRQ M+E+GWVPVRLIA+FSK                      V+RLTENIQTILDALQSST+VEVK           
Subjt:  YPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPF

Query:  PPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGE
                                         GD VRRRNDYDRWIIRPGQ+P I+ +PLSP SSNQDMLAAGVQ IALEN NHR SEGGQGDVHV  E
Subjt:  PPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGE

Query:  ALHNSRPSGNLSMQAQPYGD------NTKAGSDYSSSERS
        ALH+ RPSGNLSMQAQP GD      NTKAG D SSSERS
Subjt:  ALHNSRPSGNLSMQAQPYGD------NTKAGSDYSSSERS

A0A6J1IMA2 la-related protein 1C-like

3.8e-221

71.18

Show/hide

Query:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSSAN
        S   DADSVTAS+ADHS RNSGQ+N    SSPKSSSRRSGGRTVSSPW QIVRGE+D A AVSS  SPT VVEPV+F+SSSSSEEPVGE YDGGNGSSAN
Subjt:  SNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSSAN

Query:  AGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSRQK
        AGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDS+KSLGDG AGAQ            T TSSS+SSNKEGNNDVSPNPDSTLTHPITSRQK
Subjt:  AGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSRQK

Query:  SMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPR-NSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNY
        SMRRNGS++S+NS+L QQSAPSSPVIDPAPN+SS+DQTQRTAFI SQSH+DHGHQQPR +SFRSRGGGSHPRGDNSHHHNY SR DHDRGNQDWNSNRN+
Subjt:  SMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPR-NSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNY

Query:  NAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIG-------PPPPEALRGVPFVAPISPNAMFFHGPDPQ
        NAQP RVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFP             DF PPVVYIG       PPPPEALRGVPFVAPI PNAMFFHGPDPQ
Subjt:  NAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIG-------PPPPEALRGVPFVAPISPNAMFFHGPDPQ

Query:  LYPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQP
        LY MIVSQIEYYFS ENL+KDTFLRQ M+E+GWVPVRLIA+FSK                      V+RLTENIQTILDALQSST+VEVK          
Subjt:  LYPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQP

Query:  FPPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEG
                                          GD +RRRNDYDRWIIRPGQ+P I+ +PLSP SSNQDMLAAGVQ IALEN N R SEGGQG  HVE 
Subjt:  FPPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEG

Query:  EALHNSRPSGNLSMQAQPYGDNTKAGSDYSSSERS
        +   + RP G +         NTKAG D SSSERS
Subjt:  EALHNSRPSGNLSMQAQPYGDNTKAGSDYSSSERS

SwissProt top hits

e value

%identity

Alignment

Q8RWR2 La-related protein 1B

7.2e-28

31.09

Show/hide

Query:  NSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSSANAGKK--PAWNKLA--NGTE
        +S  N+ S  S   S SR   G   SSPW               S   PT  +      S+ S   P G +    +    NA KK  P WN  +  + ++
Subjt:  NSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSSANAGKK--PAWNKLA--NGTE

Query:  AGPVMGAV-SWPALSESAKGT--PKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSRQKSMRRNGSSNSHN
         GPVMGA  SWPALS SA+ +     S D+ K   DGS+ +          I     +S+ S+N    + VS    S  +    S++K  RRN +++S  
Subjt:  AGPVMGAV-SWPALSESAKGT--PKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSRQKSMRRNGSSNSHN

Query:  SSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNA-----QPQRVV
              S+ SS V + AP N ++DQ         +     G    RNS R+R   S+PRG+  HH   G+RR+++ GNQ   S+RNY+      QPQR V
Subjt:  SSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNA-----QPQRVV

Query:  HRFIRP-----PPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGP-PPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIVSQI
           IRP     PP  P ++  ++++P +   GGP+ +P             D+A  V    P P P  L G PF  P+ P  M+F   D  LY  I++Q+
Subjt:  HRFIRP-----PPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGP-PPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIVSQI

Query:  EYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVIGDF
        EYYFS++NL +D  LR  MN+EGWVPVR+IA+F +                      +  LT NIQTIL+AL+SS VVE                     
Subjt:  EYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVIGDF

Query:  KGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRG
                               I G+T+RRR D+D++++   + P  SG   + G+SN   L + ++S+ L   +  G
Subjt:  KGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRG

Q94K80 La-related protein 1C

2.6e-46

36.8

Show/hide

Query:  ADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGE---IDIAAAVSSSASP--TAVVEPVSFSSSSSS-------EEPVGESY
        A A S   +++  SPR    N+GS  +S   S RR   R VSSPWTQIVRGE   I  AAAV+  +SP   A +EP++  S ++        E   G+  
Subjt:  ADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGE---IDIAAAVSSSASP--TAVVEPVSFSSSSSS-------EEPVGESY

Query:  DGGNGSSANAGKKPAWNKLANG-TEAGPVMGAVSWPALSESAKG-TPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVT-GTSSSASSNKEGNNDVSPNPD
           +G   NAGKKP W + +NG +E GPVMGA SWPALSE+ K  + KSSSDSLKSLGD  + +  S     + + VT G ++++    +     +PNP 
Subjt:  DGGNGSSANAGKKPAWNKLANG-TEAGPVMGAVSWPALSESAKG-TPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVT-GTSSSASSNKEGNNDVSPNPD

Query:  STLTHPITSRQKSMR-RNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHD
             P  SRQ+S + RNG+S S N ++ Q SA  S    P+ N S + Q Q+  F  SQ+H    +   R+S+R++ G        +HH ++G RR+ +
Subjt:  STLTHPITSRQKSMR-RNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHD

Query:  RGNQDWNSNRNY-----NAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPN
         GNQ+W   R++     NAQ QR    F+R P P       F+++   +P    +PFP         L    + P + Y+ P P     G  F       
Subjt:  RGNQDWNSNRNY-----NAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPN

Query:  AMFFHGPDPQLYPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVK
          F+H  DP L+  +  QI+YYFS ENLI D +LR  MN EG+VP+R++A F K                      V  LT+NIQ I++ALQ+S  VEV+
Subjt:  AMFFHGPDPQLYPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVK

Arabidopsis top hits

e value

%identity

Alignment

AT4G35890.1 winged-helix DNA-binding transcription factor family protein

1.9e-47

36.8

Show/hide

Query:  ADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGE---IDIAAAVSSSASP--TAVVEPVSFSSSSSS-------EEPVGESY
        A A S   +++  SPR    N+GS  +S   S RR   R VSSPWTQIVRGE   I  AAAV+  +SP   A +EP++  S ++        E   G+  
Subjt:  ADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGE---IDIAAAVSSSASP--TAVVEPVSFSSSSSS-------EEPVGESY

Query:  DGGNGSSANAGKKPAWNKLANG-TEAGPVMGAVSWPALSESAKG-TPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVT-GTSSSASSNKEGNNDVSPNPD
           +G   NAGKKP W + +NG +E GPVMGA SWPALSE+ K  + KSSSDSLKSLGD  + +  S     + + VT G ++++    +     +PNP 
Subjt:  DGGNGSSANAGKKPAWNKLANG-TEAGPVMGAVSWPALSESAKG-TPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVT-GTSSSASSNKEGNNDVSPNPD

Query:  STLTHPITSRQKSMR-RNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHD
             P  SRQ+S + RNG+S S N ++ Q SA  S    P+ N S + Q Q+  F  SQ+H    +   R+S+R++ G        +HH ++G RR+ +
Subjt:  STLTHPITSRQKSMR-RNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHD

Query:  RGNQDWNSNRNY-----NAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPN
         GNQ+W   R++     NAQ QR    F+R P P       F+++   +P    +PFP         L    + P + Y+ P P     G  F       
Subjt:  RGNQDWNSNRNY-----NAQPQRVVHRFIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPN

Query:  AMFFHGPDPQLYPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVK
          F+H  DP L+  +  QI+YYFS ENLI D +LR  MN EG+VP+R++A F K                      V  LT+NIQ I++ALQ+S  VEV+
Subjt:  AMFFHGPDPQLYPMIVSQIEYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVK

AT5G66100.1 winged-helix DNA-binding transcription factor family protein

5.1e-29

31.09

Show/hide

Query:  NSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSSANAGKK--PAWNKLA--NGTE
        +S  N+ S  S   S SR   G   SSPW               S   PT  +      S+ S   P G +    +    NA KK  P WN  +  + ++
Subjt:  NSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGESYDGGNGSSANAGKK--PAWNKLA--NGTE

Query:  AGPVMGAV-SWPALSESAKGT--PKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSRQKSMRRNGSSNSHN
         GPVMGA  SWPALS SA+ +     S D+ K   DGS+ +          I     +S+ S+N    + VS    S  +    S++K  RRN +++S  
Subjt:  AGPVMGAV-SWPALSESAKGT--PKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSRQKSMRRNGSSNSHN

Query:  SSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNA-----QPQRVV
              S+ SS V + AP N ++DQ         +     G    RNS R+R   S+PRG+  HH   G+RR+++ GNQ   S+RNY+      QPQR V
Subjt:  SSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNA-----QPQRVV

Query:  HRFIRP-----PPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGP-PPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIVSQI
           IRP     PP  P ++  ++++P +   GGP+ +P             D+A  V    P P P  L G PF  P+ P  M+F   D  LY  I++Q+
Subjt:  HRFIRP-----PPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGP-PPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIVSQI

Query:  EYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVIGDF
        EYYFS++NL +D  LR  MN+EGWVPVR+IA+F +                      +  LT NIQTIL+AL+SS VVE                     
Subjt:  EYYFSSENLIKDTFLRQNMNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVIGDF

Query:  KGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRG
                               I G+T+RRR D+D++++   + P  SG   + G+SN   L + ++S+ L   +  G
Subjt:  KGGILKVRWISILKNAIVILVIGIDGDTVRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTCAAAAGCCGTCCCTGCGAAAAGCCCATACCGGCGCACGCGGGGAAGCAAGGGCATTACAGTAATTATGCAGATGCTGATTCGGTGACGGCATCGACTGCCGATCA
TTCTCCTCGTAATTCTGGACAGAATAACGGTAGCAGCGGTAGCAGCCCCAAATCATCATCACGTCGCTCTGGTGGGCGTACAGTGTCATCTCCATGGACACAGATTGTTC
GTGGTGAAATAGATATCGCGGCGGCTGTTTCGTCATCTGCATCTCCGACTGCTGTTGTTGAACCGGTATCATTTTCTTCTTCTTCTTCGTCGGAAGAGCCAGTGGGTGAG
AGTTACGATGGTGGGAATGGGTCGTCTGCAAATGCTGGAAAGAAGCCAGCGTGGAACAAACTCGCTAATGGAACTGAAGCTGGGCCTGTCATGGGGGCTGTGTCTTGGCC
CGCTCTGTCGGAGTCTGCCAAGGGCACACCTAAATCATCTTCGGATTCACTTAAAAGTTTAGGGGATGGATCCGCTGGCGCGCAGAATAGCCATCGTCGCTATTGCACAT
TTATTGACGTGACTGGAACTTCATCATCAGCATCATCAAACAAAGAAGGTAATAATGATGTTAGTCCTAACCCTGATTCAACTCTTACTCATCCAATAACTTCACGCCAG
AAATCAATGAGGCGTAATGGTTCGAGTAATTCACATAATAGTAGCCTCCCTCAACAGTCTGCACCTTCAAGTCCTGTAATTGATCCTGCTCCTAATAATTCTTCGAAGGA
TCAGACACAGAGAACCGCATTTATACCATCACAATCACATAGTGATCATGGTCATCAACAACCACGTAATTCATTTCGGAGTCGTGGTGGTGGTTCACATCCACGTGGTG
ATAATTCCCACCATCATAACTATGGTTCTAGACGTGATCATGATCGTGGAAATCAAGATTGGAATTCAAACCGAAATTATAATGCACAACCTCAGAGAGTGGTTCACAGG
TTTATTAGACCTCCTCCACCTCCACCTCCTAATACTACTGGCTTTATTTCTTCTCCAACAATGAGGCCTATTGGGGGTCCACTACCCTTCCCTGGTAGGATCTACATTTT
TCTTTTTTTGCTGAGGCTCCACGATTTTGCACCTCCGGTGGTGTATATTGGTCCTCCTCCTCCAGAGGCTCTTAGAGGTGTACCTTTTGTGGCTCCAATATCACCAAATG
CGATGTTTTTTCATGGCCCAGACCCTCAGTTGTACCCTATGATAGTGAGTCAGATAGAATACTATTTCAGTAGTGAAAATTTAATAAAAGATACTTTCTTGAGGCAGAAC
ATGAATGAAGAAGGATGGGTTCCAGTTAGACTAATAGCAAGCTTCAGCAAGAGTCGTGTGTGTTTTAAAGAAGAAGAAGGAGAAGAAGGCAGTTTTGTTGGTGCCTACTT
TTGCTGGGTTCAACGCCTGACTGAAAATATTCAAACTATATTGGATGCATTGCAATCATCTACAGTTGTGGAAGTAAAGGTCAGTGGACATCAGCTCCTGAACCAGCCTT
TTCCTCCATTTGTAATTGGAGATTTTAAGGGAGGCATACTGAAAGTTAGATGGATTAGCATCCTTAAAAATGCAATAGTAATATTAGTAATAGGTATAGACGGAGATACA
GTAAGGAGGCGAAATGATTACGATAGATGGATTATTCGACCTGGTCAAATTCCAATTATTTCAGGCTCCCCATTAAGCCCTGGAAGTTCCAATCAGGATATGTTGGCAGC
TGGTGTTCAAAGTATTGCACTAGAGAATACGAATCATAGGGGCTCTGAAGGTGGACAGGGTGATGTTCATGTTGAGGGCGAGGCACTCCATAATAGTAGGCCATCTGGAA
ATTTGAGTATGCAGGCACAGCCATATGGTGATAATACCAAGGCAGGTTCGGATTATTCATCTTCTGAAAGGAGTTAG

mRNA sequence

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Protein sequence

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MVKSRPCEKPIPAHAGKQGHYSNYADADSVTASTADHSPRNSGQNNGSSGSSPKSSSRRSGGRTVSSPWTQIVRGEIDIAAAVSSSASPTAVVEPVSFSSSSSSEEPVGE
SYDGGNGSSANAGKKPAWNKLANGTEAGPVMGAVSWPALSESAKGTPKSSSDSLKSLGDGSAGAQNSHRRYCTFIDVTGTSSSASSNKEGNNDVSPNPDSTLTHPITSRQ
KSMRRNGSSNSHNSSLPQQSAPSSPVIDPAPNNSSKDQTQRTAFIPSQSHSDHGHQQPRNSFRSRGGGSHPRGDNSHHHNYGSRRDHDRGNQDWNSNRNYNAQPQRVVHR
FIRPPPPPPPNTTGFISSPTMRPIGGPLPFPGRIYIFLFLLRLHDFAPPVVYIGPPPPEALRGVPFVAPISPNAMFFHGPDPQLYPMIVSQIEYYFSSENLIKDTFLRQN
MNEEGWVPVRLIASFSKSRVCFKEEEGEEGSFVGAYFCWVQRLTENIQTILDALQSSTVVEVKVSGHQLLNQPFPPFVIGDFKGGILKVRWISILKNAIVILVIGIDGDT
VRRRNDYDRWIIRPGQIPIISGSPLSPGSSNQDMLAAGVQSIALENTNHRGSEGGQGDVHVEGEALHNSRPSGNLSMQAQPYGDNTKAGSDYSSSERS

CaUC01G020060 (gene) of Watermelon (USVL246-FR2) v1 genome