; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G021180 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G021180
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr01:33789405..33793428
RNA-Seq ExpressionCaUC01G021180
SyntenyCaUC01G021180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN27475.1 unknown [Zea mays]2.6e-1228.79Show/hide
Query:  HNVAEIRPLRRIRRPTPLYQKYQNQYYLWNGVFEIWYLLGDGKGSLHGGHPLKRKQSRGKLPQHNPKAVHINFASIRLLLDHLRRHPSDVPKSATFTLIS
        HNVAE+RP RR+RRP  L Q  +++            LL  G   LH  H L+R+++ G+LP+H+ +AVH++ A + LLL HLRRHP      A   L  
Subjt:  HNVAEIRPLRRIRRPTPLYQKYQNQYYLWNGVFEIWYLLGDGKGSLHGGHPLKRKQSRGKLPQHNPKAVHINFASIRLLLDHLRRHPSDVPKSATFTLIS

Query:  SFRSKLFDLRSLWITPWEWRYSIPLDMSRANLNIVSVESEYGSFLLRYILRVPCDIYSVIM-----QYTGGFLQAAMNCTTNSHEFN---IHNK-IRMKF
          ++   ++  L            L + +    ++ +E      L   +L    D+   +      Q  G  L          H      +H + +  + 
Subjt:  SFRSKLFDLRSLWITPWEWRYSIPLDMSRANLNIVSVESEYGSFLLRYILRVPCDIYSVIM-----QYTGGFLQAAMNCTTNSHEFN---IHNK-IRMKF

Query:  YLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTVSTFSDSR
         L+ VG+ E  ++G+  +ELLLE G+  L  + ++HHLH +G+LLV++ V     +R
Subjt:  YLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTVSTFSDSR
TrEMBL top hitse value%identityAlignment
C0P3A9 Uncharacterized protein1.3e-1228.79Show/hide
Query:  HNVAEIRPLRRIRRPTPLYQKYQNQYYLWNGVFEIWYLLGDGKGSLHGGHPLKRKQSRGKLPQHNPKAVHINFASIRLLLDHLRRHPSDVPKSATFTLIS
        HNVAE+RP RR+RRP  L Q  +++            LL  G   LH  H L+R+++ G+LP+H+ +AVH++ A + LLL HLRRHP      A   L  
Subjt:  HNVAEIRPLRRIRRPTPLYQKYQNQYYLWNGVFEIWYLLGDGKGSLHGGHPLKRKQSRGKLPQHNPKAVHINFASIRLLLDHLRRHPSDVPKSATFTLIS

Query:  SFRSKLFDLRSLWITPWEWRYSIPLDMSRANLNIVSVESEYGSFLLRYILRVPCDIYSVIM-----QYTGGFLQAAMNCTTNSHEFN---IHNK-IRMKF
          ++   ++  L            L + +    ++ +E      L   +L    D+   +      Q  G  L          H      +H + +  + 
Subjt:  SFRSKLFDLRSLWITPWEWRYSIPLDMSRANLNIVSVESEYGSFLLRYILRVPCDIYSVIM-----QYTGGFLQAAMNCTTNSHEFN---IHNK-IRMKF

Query:  YLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTVSTFSDSR
         L+ VG+ E  ++G+  +ELLLE G+  L  + ++HHLH +G+LLV++ V     +R
Subjt:  YLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTVSTFSDSR
J3MG37 Uncharacterized protein4.8e-0436Show/hide
Query:  IYSVIMQYTGGFLQAAMNC--------------TTNSHEFNIHNKIRMKFYLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTV
        +YSV+MQYTGGFL AAMNC              T    E    ++      L+ VG+ E  ++G+  +EL+LE G+  L  + ++ HL  +G+LLV++ V
Subjt:  IYSVIMQYTGGFLQAAMNC--------------TTNSHEFNIHNKIRMKFYLNYVGMKETRKQGNFRLELLLEFGSCFLFLVWNSHHLHSNGSLLVNSTV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCACCACAATGTCGCTGAAATCCGGCCGCTTCGACGGATTCGCCGCCCAACACCGCTTTATCAGAAGTATCAAAATCAGTATTACTTGTGGAACGGGGTGTTTGA
GATTTGGTACCTTCTCGGCGACGGCAAAGGCAGCTTGCACGGGGGTCATCCCTTGAAACGGAAGCAGAGCCGTGGTAAGCTCCCACAGCACAATCCCAAAGCTGTACACA
TCAACTTTGCGAGTATAAGGCTTCTCCTTGATCATCTCCGGCGCCATCCATCGGATGTTCCGAAATCGGCTACTTTTACTCTCATTTCATCATTTAGAAGCAAGTTGTTT
GATTTGAGGTCTCTGTGGATTACTCCTTGGGAATGGAGGTATTCCATTCCTCTTGATATGTCAAGAGCTAACCTCAATATTGTTTCTGTTGAGAGTGAATATGGCTCTTT
CTTGTTAAGATACATCCTCAGAGTTCCTTGTGACATATACTCTGTAATTATGCAGTATACAGGTGGCTTTTTACAGGCTGCAATGAACTGTACAACAAACAGCCATGAAT
TTAACATTCATAACAAGATAAGGATGAAATTTTACCTGAACTATGTTGGGATGAAAGAGACGAGAAAGCAAGGCAACTTCAGACTTGAACTGTTGCTCGAGTTTGGCTCT
TGTTTCCTCTTTTTGGTTTGGAATTCTCACCATCTTCACAGCAACGGCTCTCTGCTTGTAAATTCCACGGTTTCCACATTTTCAGACTCTAGGATCATTGACCACGATTC
CAAACTATCAAATCTTCTCCTTTCCATATTTTCCATTTCAGAATTCATCTGGGATTTCAACGAGGAAGGGGTTGATAAGGGTTTGCTCTTCGATTTACGAATCCTAAGTG
AACCGAAACATGAGGTCGCCATGAAGATTCTTTACGTGAAATGGACTTTGTCTATACCAAACAGAGGCTTGTTTTTATGTCACAAAGCAAACAATCTTGGAAAGTGGAGT
AATTGTCTACCAAACTGTGGCAATAACATAACAATTCTTTTCACTATTGGAAATCATTCTCTCACAATTCAATACCAGAAATTTAGAACATGTGTAAAAAATGGAGCTGG
CCCAAGGACTTTTGACCCATTTCTGAAAGGCAAGCTTCAAGCCCATGAGGCATGTCTTAGGCACAAGGGAGCTCTTGGAGTCTGTGCATCCCAAAGCGGGAAGATATGGC
CTCGTACCCTAGGTTTGGCTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCACCACAATGTCGCTGAAATCCGGCCGCTTCGACGGATTCGCCGCCCAACACCGCTTTATCAGAAGTATCAAAATCAGTATTACTTGTGGAACGGGGTGTTTGA
GATTTGGTACCTTCTCGGCGACGGCAAAGGCAGCTTGCACGGGGGTCATCCCTTGAAACGGAAGCAGAGCCGTGGTAAGCTCCCACAGCACAATCCCAAAGCTGTACACA
TCAACTTTGCGAGTATAAGGCTTCTCCTTGATCATCTCCGGCGCCATCCATCGGATGTTCCGAAATCGGCTACTTTTACTCTCATTTCATCATTTAGAAGCAAGTTGTTT
GATTTGAGGTCTCTGTGGATTACTCCTTGGGAATGGAGGTATTCCATTCCTCTTGATATGTCAAGAGCTAACCTCAATATTGTTTCTGTTGAGAGTGAATATGGCTCTTT
CTTGTTAAGATACATCCTCAGAGTTCCTTGTGACATATACTCTGTAATTATGCAGTATACAGGTGGCTTTTTACAGGCTGCAATGAACTGTACAACAAACAGCCATGAAT
TTAACATTCATAACAAGATAAGGATGAAATTTTACCTGAACTATGTTGGGATGAAAGAGACGAGAAAGCAAGGCAACTTCAGACTTGAACTGTTGCTCGAGTTTGGCTCT
TGTTTCCTCTTTTTGGTTTGGAATTCTCACCATCTTCACAGCAACGGCTCTCTGCTTGTAAATTCCACGGTTTCCACATTTTCAGACTCTAGGATCATTGACCACGATTC
CAAACTATCAAATCTTCTCCTTTCCATATTTTCCATTTCAGAATTCATCTGGGATTTCAACGAGGAAGGGGTTGATAAGGGTTTGCTCTTCGATTTACGAATCCTAAGTG
AACCGAAACATGAGGTCGCCATGAAGATTCTTTACGTGAAATGGACTTTGTCTATACCAAACAGAGGCTTGTTTTTATGTCACAAAGCAAACAATCTTGGAAAGTGGAGT
AATTGTCTACCAAACTGTGGCAATAACATAACAATTCTTTTCACTATTGGAAATCATTCTCTCACAATTCAATACCAGAAATTTAGAACATGTGTAAAAAATGGAGCTGG
CCCAAGGACTTTTGACCCATTTCTGAAAGGCAAGCTTCAAGCCCATGAGGCATGTCTTAGGCACAAGGGAGCTCTTGGAGTCTGTGCATCCCAAAGCGGGAAGATATGGC
CTCGTACCCTAGGTTTGGCTAGTTGA
Protein sequenceShow/hide protein sequence
MAHHNVAEIRPLRRIRRPTPLYQKYQNQYYLWNGVFEIWYLLGDGKGSLHGGHPLKRKQSRGKLPQHNPKAVHINFASIRLLLDHLRRHPSDVPKSATFTLISSFRSKLF
DLRSLWITPWEWRYSIPLDMSRANLNIVSVESEYGSFLLRYILRVPCDIYSVIMQYTGGFLQAAMNCTTNSHEFNIHNKIRMKFYLNYVGMKETRKQGNFRLELLLEFGS
CFLFLVWNSHHLHSNGSLLVNSTVSTFSDSRIIDHDSKLSNLLLSIFSISEFIWDFNEEGVDKGLLFDLRILSEPKHEVAMKILYVKWTLSIPNRGLFLCHKANNLGKWS
NCLPNCGNNITILFTIGNHSLTIQYQKFRTCVKNGAGPRTFDPFLKGKLQAHEACLRHKGALGVCASQSGKIWPRTLGLAS