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CaUC01G021660 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G021660
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr01:34154307..34154645
RNA-Seq ExpressionCaUC01G021660
SyntenyCaUC01G021660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49119.1 hypothetical protein Csa_003853 [Cucumis sativus]4.9e-4688.39Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MS VL +R NGY KVDKEDPEEIIHRRAQFLINKVLERADS GKPSYLRIRIRRLKVRFGRRLK+LKKSAM SISTLKIGVYKQV++QIRNCKSLFGRKQ
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        TNF +FP+LLSS
Subjt:  TNFPDFPLLLSS

XP_008439979.1 PREDICTED: uncharacterized protein LOC103484604 [Cucumis melo]4.1e-4587.5Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFVL +RPNGY KVDKEDPEEII RRAQFLINKVLERADS GKPSYLRIRIRRLKVRFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRKQ
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        T F +FP+LLSS
Subjt:  TNFPDFPLLLSS

XP_022142336.1 uncharacterized protein LOC111012478 [Momordica charantia]1.9e-4283.04Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSF+LIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERA+S GKPSYLRIRIRRLKVRFGRRLKKLKKSA+ASIS  KIGVYKQV+ Q+RNCKSLFGRK+
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
            +    LSS
Subjt:  TNFPDFPLLLSS

XP_023003962.1 uncharacterized protein LOC111497408 [Cucurbita maxima]2.5e-4282.14Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFVL++  NGYSKVDKEDPEEIIHRRAQF+INKVLERADS GK SYLRIRIRRL+VRFGRRLKKLKKSAMASI  +KI VYKQ++ QIRNCKSLFGRK+
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        TNF + P LLSS
Subjt:  TNFPDFPLLLSS

XP_038883675.1 uncharacterized protein LOC120074584 [Benincasa hispida]3.3e-5095.54Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADS GKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQV+SQIRNCKSLFG KQ
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        T+FP+FPLLLSS
Subjt:  TNFPDFPLLLSS

TrEMBL top hitse value%identityAlignment
A0A0A0KJX3 Uncharacterized protein2.4e-4688.39Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MS VL +R NGY KVDKEDPEEIIHRRAQFLINKVLERADS GKPSYLRIRIRRLKVRFGRRLK+LKKSAM SISTLKIGVYKQV++QIRNCKSLFGRKQ
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        TNF +FP+LLSS
Subjt:  TNFPDFPLLLSS

A0A1S3B0N9 uncharacterized protein LOC1034846042.0e-4587.5Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFVL +RPNGY KVDKEDPEEII RRAQFLINKVLERADS GKPSYLRIRIRRLKVRFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRKQ
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        T F +FP+LLSS
Subjt:  TNFPDFPLLLSS

A0A5D3CMA4 Uncharacterized protein2.0e-4587.5Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFVL +RPNGY KVDKEDPEEII RRAQFLINKVLERADS GKPSYLRIRIRRLKVRFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRKQ
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        T F +FP+LLSS
Subjt:  TNFPDFPLLLSS

A0A6J1CLW2 uncharacterized protein LOC1110124789.3e-4383.04Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSF+LIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERA+S GKPSYLRIRIRRLKVRFGRRLKKLKKSA+ASIS  KIGVYKQV+ Q+RNCKSLFGRK+
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
            +    LSS
Subjt:  TNFPDFPLLLSS

A0A6J1KP23 uncharacterized protein LOC1114974081.2e-4282.14Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ
        MSFVL++  NGYSKVDKEDPEEIIHRRAQF+INKVLERADS GK SYLRIRIRRL+VRFGRRLKKLKKSAMASI  +KI VYKQ++ QIRNCKSLFGRK+
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQ

Query:  TNFPDFPLLLSS
        TNF + P LLSS
Subjt:  TNFPDFPLLLSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein3.4e-1342.86Show/hide
Query:  LIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAD--SRGKP--SYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLF-GRK
        L +RP  YSK+DKEDPEE++ RRA+FLI K L+ AD  SR  P  S++R+++  LKV+ G+RL KL++S ++++     G+ K   + +R  K +F G  
Subjt:  LIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAD--SRGKP--SYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLF-GRK

Query:  QTNFP
         T  P
Subjt:  QTNFP

AT4G04745.1 unknown protein6.4e-1235.83Show/hide
Query:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADS---------RGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRN
        M+ ++   P  Y+K++KEDP+E+IHRRAQFLI KVLERADS         R     + IR+  +++R G++L+KL+K+     + L     K     +  
Subjt:  MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADS---------RGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRN

Query:  CKSLFGRKQTNFPDFPLLLS
        C S          D P L S
Subjt:  CKSLFGRKQTNFPDFPLLLS

AT4G21902.1 unknown protein2.3e-0939.47Show/hide
Query:  LIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAD------SRGKPSYLRI---RIRRLKVRFGRRLKKLKKSAM
        +++ PN Y+K++KED  EIIHRRAQFLI+K+L+RAD       + + + +++   R+  ++++ G++L+KL+KS +
Subjt:  LIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERAD------SRGKPSYLRI---RIRRLKVRFGRRLKKLKKSAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTGTTCTCATTAGGAGGCCAAATGGTTACTCCAAGGTTGATAAAGAAGATCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTGTTGGA
ACGAGCAGATTCCAGGGGGAAACCTTCGTATTTGAGAATTAGAATTCGGAGGCTGAAGGTTAGATTTGGGAGAAGATTGAAGAAGCTAAAGAAGAGTGCAATGGCAAGTA
TTTCAACTCTCAAGATTGGTGTTTACAAGCAAGTCGTTTCTCAGATCAGAAATTGCAAGTCTTTGTTTGGCCGAAAACAAACTAACTTTCCCGATTTTCCTCTTTTGTTA
TCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTTGTTCTCATTAGGAGGCCAAATGGTTACTCCAAGGTTGATAAAGAAGATCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTGTTGGA
ACGAGCAGATTCCAGGGGGAAACCTTCGTATTTGAGAATTAGAATTCGGAGGCTGAAGGTTAGATTTGGGAGAAGATTGAAGAAGCTAAAGAAGAGTGCAATGGCAAGTA
TTTCAACTCTCAAGATTGGTGTTTACAAGCAAGTCGTTTCTCAGATCAGAAATTGCAAGTCTTTGTTTGGCCGAAAACAAACTAACTTTCCCGATTTTCCTCTTTTGTTA
TCATCTTGA
Protein sequenceShow/hide protein sequence
MSFVLIRRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSRGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFPDFPLLL
SS