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CaUC01G022150 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G022150
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCHCH domain-containing protein
Genome locationCiama_Chr01:34494658..34495525
RNA-Seq ExpressionCaUC01G022150
SyntenyCaUC01G022150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134733.1 uncharacterized protein LOC101211873 [Cucumis sativus]2.9e-5983.78Show/hide
Query:  MISLKPSTHHNG--SSFPYNYSLNLQQNPIPIIRI-KPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLL
        MISLKPSTHHNG  +SFPYN S   QQNPIPIIRI KPNF+   H++TTFRT A+  GSG G Q+RTFLTIEEAGLVEVSGL THERFLCRLTISSLNLL
Subjt:  MISLKPSTHHNG--SSFPYNYSLNLQQNPIPIIRI-KPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLL

Query:  RVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        +VIAEEE+CSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  RVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_022949732.1 uncharacterized protein LOC111453037 [Cucurbita moschata]1.6e-5782.07Show/hide
Query:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVI
        MISLKPS HHNGSSF  N S NL Q   PI R + NF P   ++TTFR RAEQ  SGNGAQRRTFLT+EEAGLVEVSGL THERFLCRLTISSLNLL+VI
Subjt:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVI

Query:  AEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        AEEE+CSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  AEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_022977984.1 uncharacterized protein LOC111478111 [Cucurbita maxima]1.1e-5882.76Show/hide
Query:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVI
        MISLKPS HHNGSSF  N S NL Q   PI R++ NF P F ++TTFR RAEQ  SGNGAQRRTFLT+EEAGLVEVSGL THERFLCRLTISSLNLL+VI
Subjt:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVI

Query:  AEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        AEEE+CSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  AEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_023544671.1 uncharacterized protein LOC111804184 [Cucurbita pepo subsp. pepo]1.9e-5882.07Show/hide
Query:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVI
        MISLKPS HHNGSSF +N S NL Q   PI R + NF P F ++TTF+ RAEQ  SGNGAQRRTFLT+EEAGLVEVSGL THERFLCRLTISSLNLL+VI
Subjt:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVI

Query:  AEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        AEEE+CSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  AEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_038881387.1 uncharacterized protein LOC120072922 [Benincasa hispida]1.3e-6289.19Show/hide
Query:  MISLKPSTHHNGSSFPYNYSLNLQQNPIP-IIRIKPNFTPEFHSR-TTFRTRAEQPG-SGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLL
        MISL PSTHHNGSSF YN S NLQQN IP IIRIKPNF P FH++ TTFRT+AEQ G SGNGAQRRTFLTIEEAGLVEVSGL THERFLCRLTISSLNLL
Subjt:  MISLKPSTHHNGSSFPYNYSLNLQQNPIP-IIRIKPNFTPEFHSR-TTFRTRAEQPG-SGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLL

Query:  RVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        RVIAEEE+CSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  RVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

TrEMBL top hitse value%identityAlignment
A0A0A0KHI4 Uncharacterized protein1.4e-5983.78Show/hide
Query:  MISLKPSTHHNG--SSFPYNYSLNLQQNPIPIIRI-KPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLL
        MISLKPSTHHNG  +SFPYN S   QQNPIPIIRI KPNF+   H++TTFRT A+  GSG G Q+RTFLTIEEAGLVEVSGL THERFLCRLTISSLNLL
Subjt:  MISLKPSTHHNG--SSFPYNYSLNLQQNPIPIIRI-KPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLL

Query:  RVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        +VIAEEE+CSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  RVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1CKG5 uncharacterized protein LOC1110124321.2e-4572.48Show/hide
Query:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPE-FHSRTTFR---TRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNL
        MISL P  + NGSSFP+  S  L   PIP     P  T      +  FR    RAEQ G GN AQRRTFLT+EEAGLVEVSGL THERFLCRLTISSLNL
Subjt:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPE-FHSRTTFR---TRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNL

Query:  LRVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        LRVIAEEE+CSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  LRVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1GCY7 uncharacterized protein LOC1114530377.7e-5882.07Show/hide
Query:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVI
        MISLKPS HHNGSSF  N S NL Q   PI R + NF P   ++TTFR RAEQ  SGNGAQRRTFLT+EEAGLVEVSGL THERFLCRLTISSLNLL+VI
Subjt:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVI

Query:  AEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        AEEE+CSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  AEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1ISV2 uncharacterized protein LOC1114781115.4e-5982.76Show/hide
Query:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVI
        MISLKPS HHNGSSF  N S NL Q   PI R++ NF P F ++TTFR RAEQ  SGNGAQRRTFLT+EEAGLVEVSGL THERFLCRLTISSLNLL+VI
Subjt:  MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVI

Query:  AEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        AEEE+CSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  AEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6P4A1U2 uncharacterized protein LOC1074220015.2e-3861.84Show/hide
Query:  MISLKP-STHHNGSSF--PYNYSLNLQQNPIPIIRIKP-NFTPEFHSRTTFRTRAEQPGSG---NGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISS
        M+SLKP  THH  SS   P+N    ++Q      +I+P    P      + R  + Q   G     +QRRTFLT+EEAGLVE+SGLGTHERFLCRLTISS
Subjt:  MISLKP-STHHNGSSF--PYNYSLNLQQNPIPIIRIKP-NFTPEFHSRTTFRTRAEQPGSG---NGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISS

Query:  LNLLRVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        LNLLRVIAE+E CSIEELNAGR+CDWF+KDKLKREQN+DSAVLQWDDS+  F
Subjt:  LNLLRVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21445.1 unknown protein1.1e-3569.7Show/hide
Query:  RTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD
        R +  T  E+    N  +RR+FL++ EAGLVE+SGLG HE+FLCRLTISSLNLLRVI+E+E CSIEELNAG++CDWFLKDKLKRE N++SAVLQWDD D
Subjt:  RTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVIAEEEECSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCACTCAAACCCTCCACTCACCACAATGGATCCTCATTCCCTTACAATTATTCTTTAAATCTTCAACAGAATCCCATTCCAATCATTAGAATTAAGCCCAATTT
CACACCTGAATTCCACAGCAGAACAACCTTCAGAACCCGCGCCGAACAACCCGGATCAGGCAACGGCGCTCAAAGACGGACTTTCTTGACCATCGAAGAAGCCGGTCTGG
TTGAAGTATCCGGCCTCGGCACGCACGAACGATTTCTCTGCCGTTTAACCATATCGTCCCTGAATTTACTGAGAGTGATAGCGGAGGAAGAGGAATGTTCCATTGAAGAG
TTGAATGCGGGAAGATTATGCGATTGGTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGGATTCTGCTGTTCTTCAATGGGACGATTCTGACCCTCTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
GTCAAGAGAATGTCGAAAAAAAAGTGTATACTCTCATTTATCCCATTCTCCATCTCCCACCACATAAAAGCAAGAGCCATACCAATAGAACCGATAAGCCTCCCTCAGCG
CCATCTTCCTTCAATCAGCTCTCACAACCAACACTTCTTTCTTTCACTTCAACAATTTACAAGAAATGATCTCACTCAAACCCTCCACTCACCACAATGGATCCTCATTC
CCTTACAATTATTCTTTAAATCTTCAACAGAATCCCATTCCAATCATTAGAATTAAGCCCAATTTCACACCTGAATTCCACAGCAGAACAACCTTCAGAACCCGCGCCGA
ACAACCCGGATCAGGCAACGGCGCTCAAAGACGGACTTTCTTGACCATCGAAGAAGCCGGTCTGGTTGAAGTATCCGGCCTCGGCACGCACGAACGATTTCTCTGCCGTT
TAACCATATCGTCCCTGAATTTACTGAGAGTGATAGCGGAGGAAGAGGAATGTTCCATTGAAGAGTTGAATGCGGGAAGATTATGCGATTGGTTTCTCAAGGATAAGTTG
AAAAGAGAGCAGAATTTGGATTCTGCTGTTCTTCAATGGGACGATTCTGACCCTCTCTTCTGAGGTTTTTCTTCTACCAAATACAACTCCTCCTATCCCCACTTTCAAAA
CAGATTGTTACTCGTATCTTCCTTAGTATTAAAATAGAATTTCGCATTATATTTGGGAAATTAATTGATTTCCTTTCCTTTCTTATAATTTAGATTTAGGGTCAATCAAA
TGGTTTATGATA
Protein sequenceShow/hide protein sequence
MISLKPSTHHNGSSFPYNYSLNLQQNPIPIIRIKPNFTPEFHSRTTFRTRAEQPGSGNGAQRRTFLTIEEAGLVEVSGLGTHERFLCRLTISSLNLLRVIAEEEECSIEE
LNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF